DY260543

Overview
NameDY260543
Unique NameDY260543
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1190
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY260543 vs. ExPASy Swiss-Prot
Match: WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum GN=WUN1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.272e-14
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 3 
Query:  339 RQISWVPAWTVADGIITQVREYFHTSLTVPRFGKDLSGPSQRKKSPPSDFPSTAEINPVHCPSVWESSLSHRDGK 563
            R I+WV AWTV DG+ITQVREYF+TSLTV RFGK             SD  S   I  +HCPSVWESSL +R GK
Sbjct:   38 RSITWVHAWTVTDGVITQVREYFNTSLTVTRFGK-------------SDISS---ITTLHCPSVWESSLPNRVGK 96
The following BLAST results are available for this feature:
BLAST of DY260543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WUN1_SOLTU1.272e-1458.67Wound-induced protein 1 OS=Solanum tuberosum GN=WU... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YN10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260543 ID=DY260543; Name=DY260543; organism=Citrus clementina; type=EST; length=1190bp
GTTTCTCTGTTTCCTTTGTTGCCATTTTTTAAGGCTATTCCGTCCAGAAC
TGGCTAACTCTCAGCAGAAAAATCCGGAAGATTCCGAAAACAAGAACCAG
CGCGTGGTTCTTGCTCTGTATGATGCCTTAAAATCCCGAGACGTTGAAAC
GGTACACAAGATCCTTGCCCCGGACCTAGAGTGGTGGTTCCCTGGCCCGC
CGACCCACCAGTTTATGATGCACCTTCTCACCGGCAGCACCACCGCATCG
TCAGCATCGCAAAGCTCCTTCGTATTCGTTCCTCTCTCGATCCCATCGTT
CGGGCCCATTGTCCTCGCCGAGGGCTGTGATCACAGCCCGTCAAATCAGC
TGGGTCCCCGCCTGGACGGTCGCTGATGGGATAATTACTCAAGTCAGAGA
ATACTTCCACACTTCGCTTACCGTCCCCCGCTTCGGTAAAGACTTGTCTG
GCCCAAGTCAGAGGAAGAAATCACCCCCCTCTGATTTCCCATCAACAGCC
GAGATTAATCCGGTGCATTGCCCCTCCGTTTGGGAGAGCAGCCTCTCCCA
CCGGGACGGTAAAATCTGTCCCGGGTTTGGTTCCCCCTCCCCAAGCCAAC
CCAAAAAGGGACCCGAGATTGACCCCGTGCCGCCGCGTGTATTATAATAT
TATACCCTATTAACATATAAATAAAGGGCGGCCGTGACCCCTGTCCCCCC
CCGGTGGGCCCCCCCCTTAAAAATGTTGAATGACCTGAGGCCCTGGTTGG
GGGAATCGCTTGGGGTTGTTTCCCCCCTTTCTTTTCGCTCCGGCCTCCCC
GCGCTTGCTCCTTCCACACCCTCGGCCCCCCCCCGGCCCCAACCCCCCCC
TCCCAACCCCCCCCCCCCCCCGCCCCCCTCCCCCCCCCCTCCCCTCCCCC
CCATCGCCCCCTCCCCTCACCCCACCCACCTCCTCCCCTCTTCTCCCCCA
CCCCCCACCCCACCCCCCCCTCTACTCTCTCCCGCACACCCCATATCCCC
CCCCCCCCCCTCCCTCTCCCCCTCCGCCCCCCCTCCCACCCCCCCCCTCC
CGCCCCCCAACCCCCCCACCCCTCGCGCCCCATGCCCCCCCCCCACTCCC
CACCCCCCCCCCCGCCCCCCTGTCGTCGTCCCTCCCCCTCTCGCCCATCG
CTCACCCGCCCCATCCCCACTCCCCCTTCCCCCCCCCCCC
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