DY260551

Overview
NameDY260551
Unique NameDY260551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1126
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.780e-46
Identity = 101/155 (65.16%), Postives = 121/155 (78.06%), Query Frame = 2
Query:  113 PAVSDNTPPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPIRPCNPTGV*QGADE 577
            PA ++ +P     FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVL+ALGV +    P G+ +  +E
Sbjct:   95 PACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGV-VLDLGPEGIKRCVEE 248          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.031e-23
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  143 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL+  M+  A  V  +G+A+DIVG+GGD A+TVNIST A+I+AAA G  VAK             D+L+ALGV I
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIVGSGGDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAI 136          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 8.405e-21
Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 2
Query:  101 PTPQPAVSDNTPPQTPCFNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGV 529
            P   PA S+  P        LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E+ GL  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVL+ALGV
Sbjct:    4 PASAPAASNTWPG-------LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGV 140          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_ARTS2 (Anthranilate phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.098e-20
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 2
Query:  161 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGV 529
            LI  LI+  DLT    + ++D +++ EA  + I+ FLV LR+KGET  EI GL  AM+ +A  V+  G+ +DIVGTGGD  NTVNIST A+++ A  GAKV K             DVL+ALGV
Sbjct:   17 LISALINGADLTADNTEWAMDTIMSGEATPSQIAGFLVALRSKGETVDEIAGLVEAMLAHANPVDIAGEKLDIVGTGGDQLNTVNISTMAALVCAGAGAKVVKHGNRASSSSSGSADVLEALGV 140          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.434e-20
Identity = 63/146 (43.15%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  158 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPIRPCNPTGV*QGADEATLRL 592
            E+++ L+   D +  +   ++D ++  EA +A I+ FLV LRAKGET  EI GL RAM ++A  +E  G  VDIVGTGGDGA TVNIST +SI+ A  GAKV K             DVL+ LG+ ++   P  V + A+EA + +
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQ-LTPKRVAEVAEEAGITI 163          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.446e-20
Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 2
Query:  164 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            +  ++++  LT  EA++  + +LN +D   I+AFL +L+ +GET  EI G+  A+ K AT V+    A+DIVGTGGD ANTVNISTG++IL+AACG  +AK             DVL+ALG+ I
Sbjct:    6 LQSIMNQSHLTYDEAESVTNLMLNGSDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEI 129          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.448e-20
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 2
Query:  164 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            +  ++++  LT  E ++  + +LN AD   I+AFL +L+ +GET  E+ G+  A+ K AT V     A+DIVGTGGD ANTVNISTG++ILAAACG  +AK             DVL+ALG+ I
Sbjct:    6 LQSIMNQSHLTYDEVESVTNLMLNGADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEI 129          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.704e-19
Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 2
Query:  152 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPIRPCNPTGV*QGADE 577
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + AT+++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVL+ALGV +   +P  V QG +E
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKL-DTHPEVVEQGIEE 144          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_STRGG (Anthranilate phosphoribosyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.867e-19
Identity = 57/124 (45.97%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  161 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGV 529
            L++ L+   DL+  E   ++D +++ EA +A I+ F V LRAKGET  E+ GL RAM  +A  +E  G  VDIVGTGGD A TVNIST ++I+ A  GAKV K             DVL+ LGV
Sbjct:   20 LLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAHANTIEVPGRTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGV 143          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.867e-19
Identity = 60/147 (40.82%), Postives = 77/147 (52.38%), Query Frame = 2
Query:  152 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPIRPCNPTGV*QGADEATLR 589
            F   I  L +   LT AEA+A+ D +   E   A +  FL+ +R +GET  EI+G   AM     +V+   DA+DIVGTGGDG  T N+ST AS++ AACG  VAK             DVL ALGV       TG+     EA +R
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGV------RTGLDSAGVEACIR 144          
The following BLAST results are available for this feature:
BLAST of DY260551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
TRPD_ARATH5.780e-4665.16Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC14.031e-2347.73Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
TRPD_ARTAT8.405e-2143.06Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_ARTS21.098e-2046.77Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_STRAW1.434e-2043.15Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_CHLFF2.446e-2045.16Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLCV5.448e-2045.16Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_DESAA2.704e-1940.28Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_STRGG7.867e-1945.97Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_BEII97.867e-1940.82Anthranilate phosphoribosyltransferase OS=Beijerin... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YN24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260551 ID=DY260551; Name=DY260551; organism=Citrus clementina; type=EST; length=1126bp
TAATAATCCCCCCTATCACCGGCCTTCCTTACCGTCGCTTCCAAACTGTG
GATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAACTGCTATT
CCAACCCCTCAGCCGGCTGTTTCTGATAATACTCCCCCTCAAACGCCCTG
CTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGG
CGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCC
TTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGG
AGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGTGG
AAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCA
AACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGG
TGCAAAAGTTGCCAAGCAAGGGAGTCGGTCCAGTTCTTCTGCCTGTGGAA
GTGCTGATGTGTTACAAGCCTTGGGTGTCCCTATCCGACCTTGTAACCCA
ACGGGTGTATGACAGGGTGCGGACGAGGCAACGCTTCGGCTTCAGGATTC
CACCCAAGACCTCCTCCCCGTATAAACGTCGCTAACGCCCGCGACGCAGT
CGCACCCAGCCAACACCCTTCCCCCACCCCACCCCGCCCCCCCCGTCAAT
CCCCGCCCCGTCCCCACACCTGTGCAGCCCGTCGGTCCCGCTCACCCTCC
CACCCCCCCCCCACCCACCTCCCGCCCCCCCCCCCAATGACCCTAATCAC
GACCCCACCAGACACATCCGAACCCACACCACCCCCAACGACCCCCTACT
CCTCCCCCCCATCCCACCCACACACTGTCAACCACCGACCACCATCCATC
CACAACCACCTCCCTACTCCCATGTGCCCTCACTCGCACTCACCTCACCC
CTCCTCCCCCCACCCGCCCCCAGACCCCGCCCCACCCCCAACCACCACCA
ACCCCAAGCCACGTCACATACCCCCCCACCACTCCCAACCACACGAGTGC
CGCCCCCCCCCGCCACACCCCTCACCCCCCCACCCAACAACACCACACGC
CCCCCCCCACTATACCTCACACTACC
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