DY260554

Overview
NameDY260554
Unique NameDY260554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.251e-28
Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TKIV TLGP SRSV++    L+AGM+VARF+FS G  +YHQETL NLK A+  T  LCAVMLDT GPE++    K  K I LK    V +T D   +   +++ +++  L   +K G+TI           T ++ +   +     V C  +NTATL
Sbjct:   23 TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTI------LCSDGTITLTVLSCDPDAGTVRCRCENTATL 173          

HSP 2 Score: 41.5874 bits (96), Expect = 1.251e-28
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  697 IPIELPTLSDKDKEVHYSWGVPNKIDFPPLS 789
            + ++LPTL++KDKE    WGVPNKID   LS
Sbjct:  184 VVVDLPTLTEKDKEDILGWGVPNKIDMIALS 214          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.121e-28
Identity = 67/157 (42.68%), Postives = 96/157 (61.15%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSE-KAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TKIV TLGP SR+V ++   L+AGM+VARF+FS G  EYHQETL+NLK A++ T+ LCAVMLDT GPE++    ++ K I LK    + ++ D   +   +++ +++  L   +K G+TI        G+ T +V L      G  V C  +NTATL
Sbjct:   22 TKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCAD----GTITLTV-LSCDPPSGT-VRCRCENTATL 172          

HSP 2 Score: 39.6614 bits (91), Expect = 2.121e-28
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  697 IPIELPTLSDKDKEVHYSWGVPNKIDFPPLS 789
            + ++LPTL++KDKE    WGVPN ID   LS
Sbjct:  183 VVVDLPTLTEKDKEDILEWGVPNNIDMIALS 213          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.860e-27
Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TKIV TLGP SRSV +I   L+AGM+VARF+FS G+ +YHQET++NL+ A+++T  LCAVMLDT GPE++    K  K + LK    + ++ D   +    ++ +++  LA+ VK    I     L    + T   L   +  G D  C  +NTA L
Sbjct:   20 TKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVI-----LCADGQITFTVLSCDKENGLD-RCRCENTAVL 170          

HSP 2 Score: 39.6614 bits (91), Expect = 3.860e-27
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  703 IELPTLSDKDKEVHYSWGVPNKIDFPPLS 789
            ++LPTL+DKDK+   +WGVPN ID   LS
Sbjct:  183 VDLPTLTDKDKDDILNWGVPNHIDMIALS 211          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.109e-26
Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TKIV TLGP SRSV ++   L AGMSVARF+FS G+ EYHQETL+NL+ A+  T  LCAVMLDT GPE++    K  K I LK    + ++ D   +   + + +++  LA+ V  G  I        G+ +  V L   + KG  V C  +NT+ L
Sbjct:    9 TKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCAD----GTISLKV-LSCDKEKGT-VRCRCENTSML 159          

HSP 2 Score: 38.891 bits (89), Expect = 1.109e-26
Identity = 16/31 (51.61%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  697 IPIELPTLSDKDKEVHYSWGVPNKIDFPPLS 789
            + ++LPTL++KDK+    WGVPN+ID   LS
Sbjct:  170 VVVDLPTLTEKDKQDILEWGVPNQIDMIALS 200          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.262e-18
Identity = 51/166 (30.72%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L  +    LP
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGENKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.262e-18
Identity = 51/166 (30.72%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L  +    LP
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGENKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.596e-18
Identity = 51/166 (30.72%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L  +    LP
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGENKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.596e-18
Identity = 51/166 (30.72%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L  +    LP
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGENKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_TRYBO (Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.466e-17
Identity = 52/158 (32.91%), Postives = 89/158 (56.33%), Query Frame = 3
Query:  201 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLA 668
            KI+ T+GP S+SV+V+   +KAG++VAR +FS G  EYHQ+T++N++ A         + LDT GPE++        + ++A  +V+LT D    ++ T++   +++  + K V  G  IF+   L          L V ++ G D+ CV +NT T++
Sbjct:   26 KIICTIGPSSQSVEVLKDLMKAGLNVARMNFSHGTYEYHQKTIDNVRKAASELGIHVGIALDTKGPEIRTGLFPAGDVVIEAHKTVILTTDETFKEKGTAEKFYVDYMNITKVVPVGGHIFVDDGLLD--------LIVVKISGKDIECVAQNTHTIS 175          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_THELI (Pyruvate kinase (Fragment) OS=Thermococcus litoralis GN=pki PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.266e-17
Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TKI+ T+GP S+  + I   +KAGMSVAR +FS G  E H +T+E ++   +  ++  A++ D  G +++V      +++L+    VVLT     E     +P+ F  L K V KGDTI++            + L V EV+ N+V CV+ N   L
Sbjct:   12 TKIIATIGPASKQKESIKKMIKAGMSVARINFSHGTLEEHAKTIETVRDVAEKLERRVAILGDLPGLKMRVGKIKGDSVTLRKGDKVVLTTR-DIEGDETTIPVEFKDLPKLVSKGDTIYLSD--------GYIMLRVEEVRENEVECVVVNGGIL 158          
The following BLAST results are available for this feature:
BLAST of DY260554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYC_SOYBN1.251e-2842.04Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU2.121e-2842.68Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_TOBAC3.860e-2740.76Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH1.109e-2642.68Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK1_SALTY2.262e-1830.72Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI2.262e-1830.72Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_ECOLI8.596e-1830.72Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO578.596e-1830.72Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK_TRYBO1.466e-1732.91Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE... [more]
KPYK_THELI3.266e-1733.97Pyruvate kinase (Fragment) OS=Thermococcus litoral... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YO03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260554 ID=DY260554; Name=DY260554; organism=Citrus clementina; type=EST; length=1119bp
ATCAACGAATAAACTATAAAATTCCAAACACTCTAATCAACGCTAACCGC
TGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTGTATCTCTCTGT
TCAGTGAAAGATGCATTCCAGTCACTTGCTTCTCGAGGAGCCAATCAGGA
TGGCTTCCATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACC
AAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATC
CGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGG
GTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTT
AAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGA
ATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATG
GTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTT
TTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACAC
CATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGT
GGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAG
AATACTGCAACGTTGGCTGGTTCCCTTTTCCCTTACCTGCCTCCCAATTC
CTATTGAACTGCCCACTCTTTCCGATAAAGATAAGGAGGTCCATTATTCT
TGGGGAGTTCCAAACAAAATTGACTTCCCCCCCTTGTCCCAAACCCCAAC
TGCCAAAAAACCTGCCCCCCCAGCCCCCCCAATTACTCCCCCCATTTGGG
TGACCCTCCCTCCAACCCCCAATTTTTCCCAAAAATCAAAAAAAAAAGGG
TTTGCCCCCTTTTTTAAGAACTCCTCCACCCCCCAAAAGGAATTATTCCC
TCCCCCGGGAAAATTGGGAACACCCCCCCTCCCCCCCGCAAAGGGTTTTC
CTGCTTCCCAAACCCTCCCCCCTTTTAACAGCTAAACTCAGCGCGCGAAA
CCCCCACCCACGGGTTCTCCCCGCTGTGTTCGGCACCAAAAAATCCAGAC
ACAACCACCGCGACAAACC
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