DY260562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 4.519e-71 Identity = 130/155 (83.87%), Postives = 142/155 (91.61%), Query Frame = 3 Query: 39 MDVIKTPPISSRPIEKVLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENA 503 MDVIKT IS+R IEKV+VHPLVLLSIV +Y+RV +D+ KRVVGVLLGSS +G VDV++SYAVPFEEDDKDP IWFLDHNYHESM+ MFKRINAKEHVVGWYSTGPKLRENDLD+H LF+ YVPNPVLVIIDVQPKELGIPTKAYY VEEVKENA Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENA 155
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 3.977e-51 Identity = 91/137 (66.42%), Postives = 116/137 (84.67%), Query Frame = 3 Query: 90 LVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 +VHP VLLS+V +Y+RV +DT KRVVG LLGS+ KG VDVS+ Y +PFEED+ +P IWFLDHN+HE+M++MFK+INA+E+VVGWYSTGPK+R D DI++LF Y PNPV+VIIDV PKELGIPTK+Y VEE+ ++ Sbjct: 9 IVHPTVLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKD 145
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 2.258e-46 Identity = 86/142 (60.56%), Postives = 117/142 (82.39%), Query Frame = 3 Query: 78 IEKVLVHPLVLLSIVHNYHRVPQ-DTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 ++KV+VHPLVLLS+V +++R+ + +KRVVGVLLGS K +DVS+S+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDD 147
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 2.258e-46 Identity = 86/142 (60.56%), Postives = 117/142 (82.39%), Query Frame = 3 Query: 78 IEKVLVHPLVLLSIVHNYHRVPQ-DTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 ++KV+VHPLVLLS+V +++R+ + +KRVVGVLLGS K +DVS+S+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDD 147
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 2.258e-46 Identity = 86/142 (60.56%), Postives = 117/142 (82.39%), Query Frame = 3 Query: 78 IEKVLVHPLVLLSIVHNYHRVPQ-DTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 ++KV+VHPLVLLS+V +++R+ + +KRVVGVLLGS K +DVS+S+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDD 147
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.261e-45 Identity = 86/140 (61.43%), Postives = 111/140 (79.29%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVP--QDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 V V PLVLLS+V +Y+R + KRVVGVLLG + V VS+S+AVPFEEDDKDP +WFLDHNY ESM MFK++NA+E ++GWY +GPKLR +DLDI++LF Y PNP+LVI+DVQPKE G+PT AY+ V+E+K++ Sbjct: 16 VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDD 155
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 182.956 bits (463), Expect = 3.261e-45 Identity = 87/149 (58.39%), Postives = 116/149 (77.85%), Query Frame = 3 Query: 60 PISSRPIEKVLVHPLVLLSIVHNYHRVPQ-DTRKRVVGVLLGS-SFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 P + KV+VHPLVLLS+V +++R+ + +KRVVGVLLG KG +DVS+S+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E VVGWY TGPKL +ND+ I++L Y PN VLVIID +PK+LG+PT+AY VEEV ++ Sbjct: 2 PSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDD 150
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.239e-44 Identity = 79/140 (56.43%), Postives = 114/140 (81.43%), Query Frame = 3 Query: 81 EKVLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 ++V+VHPLVLLS V +Y+R + T++RVVG+LLG + V+V++SYA+PFEED+K+ +WFLDHN+ ESM MFK+INA E +VGWY TGP+LR +DL+I+ L Y+PNPVLVIIDV+PK +G+PT AY+ ++E++++ Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEIEDD 154
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: RPN8_CANGA (26S proteasome regulatory subunit RPN8 OS=Candida glabrata GN=RPN8 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.269e-37 Identity = 73/141 (51.77%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 81 EKVLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 + V + PLVLLS++ +Y R KR VGV+LG S T+ V++S+A+PFEED+K+ +WFLDHNY ESM M K+INAKE ++GWY +GPKLR +DL I++LF Y NP+L+I+DV+ +++G+PT AY VE+VK++ Sbjct: 6 DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDVWFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQGNPLLLIVDVKQQDVGLPTDAYMAVEQVKDD 146
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: RPN8_YEAST (26S proteasome regulatory subunit RPN8 OS=Saccharomyces cerevisiae GN=RPN8 PE=1 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 9.510e-37 Identity = 72/141 (51.06%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 81 EKVLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 EKV + PLVLLS + +Y R KR VGV+LG + T+ V++S+A+PFEED+K+ +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I++LF Y NP+L+I+DV+ + +G+PT AY +E+VK++ Sbjct: 6 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDD 146 The following BLAST results are available for this feature:
BLAST of DY260562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260562 ID=DY260562; Name=DY260562; organism=Citrus clementina; type=EST; length=1234bpback to top |