DY260606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_RAT (Exportin-1 OS=Rattus norvegicus GN=Xpo1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.874e-29 Identity = 75/159 (47.17%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 2 KFHILVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQ---LLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE 469 K H +LE AL+ L Y++ +S V+ETE+FK+CL+YWN EL+ E+P T+ PLL G+Q + RRQLY LSK+R+LM+ RMAKPEEVL+VE++ G +VRE MKD D + YK MRETL+YL+HLD+ DTE Sbjct: 331 KEHGQLLEKRLNLREALMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYR-----ESPFSTS-----ASPLLS------GSQHFDIPPRRQLYLTVLSKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTE 473
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_MOUSE (Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.874e-29 Identity = 75/159 (47.17%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 2 KFHILVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQ---LLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE 469 K H +LE AL+ L Y++ +S V+ETE+FK+CL+YWN EL+ E+P T+ PLL G+Q + RRQLY LSK+R+LM+ RMAKPEEVL+VE++ G +VRE MKD D + YK MRETL+YL+HLD+ DTE Sbjct: 331 KEHGQLLEKRLNLREALMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYR-----ESPFSTS-----ASPLLS------GSQHFDIPPRRQLYLTVLSKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTE 473
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_HUMAN (Exportin-1 OS=Homo sapiens GN=XPO1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.541e-28 Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 2 Query: 2 KFHILVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQ---RRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEK 472 K H ++E L+ L Y++ +S V+ETE+FK+CL+YWN EL+ E+P T+ PLL G+Q RRQLY L K+R+LM+ RMAKPEEVL+VE++ G +VRE MKD D + YK MRETL+YL+HLD+ DTE+ Sbjct: 331 KEHDQLIEKRLNLRETLMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYR-----ESPFSTS-----ASPLLS------GSQHFDVPPRRQLYLPMLFKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTER 474
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_DICDI (Exportin-1 OS=Dictyostelium discoideum GN=xpo1 PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.628e-27 Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 2 KFHILVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE 469 K H+ ++E++ NI L + E L+NIS +DE E+FK+CL+YWN L+ + T ++ P R QLY LSK+R+++I MAKPEEV++VEDENGNIVRET KD D L Y+ MRETLI+L+HLD E+T+ Sbjct: 331 KSHLKIMENSL-NIPYLTLAHEILVNISNIDELELFKICLEYWNFLSSNLYS-----DIATFTTTLLSTP----------------PRLQLYKSVLSKVRVVLIDHMAKPEEVIVVEDENGNIVRETTKDTDSLTLYESMRETLIFLTHLDSENTQ 464
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_DROME (Exportin-1 OS=Drosophila melanogaster GN=emb PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.350e-26 Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = 2 Query: 41 ISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDA---HNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEK 472 + L L YL+ IS V++ EVFK+CL+YWNS V +L+++ H LE+ Q+ RR+ YA LSK+R +MI RMAKPEEVL+VE+ENG +VRE MKD + + YK MRETL++L+HLD DT++ Sbjct: 340 VDYLNQALMYLVMISEVEDVEVFKICLEYWNSLVEDLYNSEFFHPTLESTK--------------------RQQVYPRRRFYAPILSKVRFIMISRMAKPEEVLVVENENGEVVREFMKDTNSINLYKNMRETLVFLTHLDSVDTDR 466
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_SCHPO (Exportin-1 OS=Schizosaccharomyces pombe GN=xpo1 PE=1 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 1.523e-25 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 2 Query: 8 HILVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLE----NPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE 469 H+ LE+ EN LL YL+NIS ++E E+FK+CL+YW+ V +L++ + NP + + P L+ S + + A L R+ +Y LS LR++MI M KPEEVLIVE++ G IVRE +K+ D + YK MRE L+YL+HLD DTE Sbjct: 322 HLRPLENP-ENQEVLLNAHSYLLNISRINEREIFKICLEYWSKLVAQLYEEMQQIPMSEMNPLLN---LSSPTSLISSNPNML-ANLPLRKHIYKDILSTLRLVMIENMVKPEEVLIVENDEGEIVREFVKETDTITLYKSMREVLVYLTHLDVVDTE 474
BLAST of DY260606 vs. ExPASy Swiss-Prot
Match: XPO1_YEAST (Exportin-1 OS=Saccharomyces cerevisiae GN=CRM1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.634e-19 Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 17 VLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGA-------QLLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEK 472 +LES + LL +YLI +S ++E E+FK LDYW++ V +LF L PA + + ++ G GA + ++ +Y S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DTE+ Sbjct: 329 LLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEVQRL--PATEMSPLIQLSVGSQAISTGSGALNPEYMKRFPLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEE 485 The following BLAST results are available for this feature:
BLAST of DY260606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260606 ID=DY260606; Name=DY260606; organism=Citrus clementina; type=EST; length=953bpback to top |