DY260665

Overview
NameDY260665
Unique NameDY260665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length993
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY260665 vs. ExPASy Swiss-Prot
Match: DNAJL_MYCPN (DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae GN=MPN_002 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.013e-12
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1 
Query:  175 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD-FIEIHNAYETLSDPTARAVYDMSLEGMRRANEHRDR 396
            +LY++L +  TAT+ EIKTAY+ LAK YHPD++  G D F++I+NAY  LSD T +A YD     M R +E  DR
Sbjct:    2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD----AMLRFSEFEDR 72
The following BLAST results are available for this feature:
BLAST of DY260665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DNAJL_MYCPN6.013e-1250.67DnaJ-like protein MG002 homolog OS=Mycoplasma pneu... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP13YD19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260665 ID=DY260665; Name=DY260665; organism=Citrus clementina; type=EST; length=993bp
CGCAACGCAAAGAGAATGAACGGAGCCCTTAACATGCTCGGAATGAACGC
CCTTCATTTTTCGCCGCATCCCAGAACTGGGTTTCTCGATAACGGCGCCG
TTTCGGGAAAGAACAAGCGGAGTCCCCGTGCGGTTTCAGTGGAGATGCCG
GTGACGGCGCCGGGGACGGGAGGGAGCTTGTACGAGGTCCTGAGGGTGGA
GCCAACGGCGACGATTTCGGAGATTAAGACGGCGTATCGGAGTTTGGCGA
AGGTTTATCATCCCGATTTGTCGGGTAACGGCCGGGATTTCATCGAGATC
CACAACGCTTACGAGACGCTGTCGGATCCAACGGCCAGGGCTGTTTATGA
CATGTCATTGGAGGGTATGAGGAGGGCAAACGAACACCGCGATCGATGGC
GTGGACAGAAAGAGAAGAACTCCTACAGCGGAGGTCTAAAAGGAGACGAG
ACGCAGACATCACATGAGGATGTGTAAACGTGAGACTATTCGTTGTTAAA
GATATTAGTCTGCTGACTCTGATTGAAATAGTCCAAAAAACTTACAATAG
AGAGTAGCAAGAGCCTGAAAACCGCGAGGCAAATATATATTAATCTATTT
ATAACCCCTATTATATAAACATATCTTAACTTTAATGAGTTACGGAGTAT
AACTCTCTCTATGACACTTCCTAATTCCTTATCACATCTTTCTAGTCTAT
ATTTAAAATTATTGTCACCATCTCCTACCATTCACTCGTCTACTTCTTAT
TCCCTCCCACAACGCACTCCCCTCAACCCCCCCCACCTTATCTCCCTTTT
ATACTCATCCACATTATATAATTTATCTTAATTTTTAACACTTGTTCCGT
AAACAAATAATACATTGTTCTCTAATACCTAATATACATATCCAAGTTGC
TTAAAAATTAACTTGATCCTTGACATTTCAAGAAGTATACTGTTATCAAT
TCATATATCAATCCATCTAACCTTCACTGTATCGTCCCGATTC
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