DY260712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_SOYBN (Meiotic recombination protein DMC1 homolog OS=Glycine max PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 9.562e-124 Identity = 143/170 (84.12%), Postives = 152/170 (89.41%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPKKP 926 G+ET AITEAFGEFRSGKTQLAHTLCV TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDF+GRGE A+RQQ + R KI+E NVAV TNQ +DPGGG F+++PKKP Sbjct: 123 GVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFSGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKP 292 HSP 2 Score: 182.956 bits (463), Expect = 9.562e-124 Identity = 92/102 (90.20%), Postives = 100/102 (98.04%), Query Frame = 1 Query: 112 MIATLKAEEQS-QLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLR 414 M+ATLK+EE S QLQLVEREDIDD+EDLFEAIDKLI+QGINAGDVKKLQDAGIYTCNGLMMHTKK+LTGIKGLSEAKV+KICEAAEK+VNFGYITGSDALL+ Sbjct: 1 MLATLKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK 102
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_ARATH (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana GN=LIM15 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 1.501e-121 Identity = 144/170 (84.71%), Postives = 152/170 (89.41%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPKKP 926 GIET AITEAFGEFRSGKTQLAHTLCV TQLPTNM+GGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR+LIVDS+IALFRVDFTGRGE A+RQQ + R KI+E NVAV TNQ ADPGGG F+S+PKKP Sbjct: 122 GIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKP 291 HSP 2 Score: 173.326 bits (438), Expect = 1.501e-121 Identity = 84/101 (83.17%), Postives = 98/101 (97.03%), Query Frame = 1 Query: 112 MIATLKAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLR 414 M+A+LKAEE SQ+QLVERE+ D++EDLFE IDKLI+QGINAGDVKKLQ+AGI+TCNGLMMHTKK+LTGIKGLSEAKV+KICEAAEKIVNFGY+TGSDAL++ Sbjct: 1 MMASLKAEETSQMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIK 101
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_LILLO (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum GN=LIM15 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 2.889e-111 Identity = 139/170 (81.76%), Postives = 146/170 (85.88%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPKKP 926 GIET ITEAFGEFRSGKTQ+AHTLCV TQLP +M GGNGKVAYIDTEGTFRPDRIVPIAERFGMD AVLDNIIYARAYTYEHQYNLLL LAAKMSEEPFRLLIVDSVIALFRVDF+GRGE AERQQ + R KI+E NVAV TNQ ADPGGG F+S+PKKP Sbjct: 127 GIETLQITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAERFGMDASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKP 296 HSP 2 Score: 154.066 bits (388), Expect = 2.889e-111 Identity = 76/95 (80.00%), Postives = 87/95 (91.58%), Query Frame = 1 Query: 133 EEQSQLQLVEREDIDDEE-DLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLR 414 E QLQL++R++ ++EE D FE+IDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKK+LTGIKGLSEAKV+KICEAAEK+VN GYITGSD LL+ Sbjct: 12 ESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLK 106
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_MOUSE (Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus GN=Dmc1 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.116e-67 Identity = 108/173 (62.43%), Postives = 127/173 (73.41%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGG-GFLSNPKKP 926 GIE+ AITEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGE AERQQ + R QKISE NVAV TNQ ADPG F ++PKKP Sbjct: 115 GIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKP 287 HSP 2 Score: 81.6481 bits (200), Expect = 2.116e-67 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 151 QLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYIT 393 Q+V+ E DDEE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KGLSEAKVEKI EAA K++ G++T Sbjct: 5 QVVQEESGFQDDEESLFQDIDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVEKIKEAANKLIEPGFLT 87
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_HUMAN (Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens GN=DMC1 PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 3.008e-66 Identity = 108/173 (62.43%), Postives = 127/173 (73.41%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGG-GFLSNPKKP 926 GIE+ AITEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGE AERQQ + R QKISE NVAV TNQ ADPG F ++PKKP Sbjct: 115 GIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKP 287 HSP 2 Score: 78.9518 bits (193), Expect = 3.008e-66 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 175 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYIT 393 D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KGLSEAKV+KI EAA K++ G++T Sbjct: 15 DEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLT 87
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DLH1_CANAL (Meiotic recombination protein DLH1 OS=Candida albicans GN=DLH1 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.025e-60 Identity = 93/165 (56.36%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLS 911 GI++ +ITE FGEFR GKTQL HTLCV QLPT+M GG G+VAYIDTEGTFRPDRI IAER+G+D L+NI YARA EHQ L+ L +++E FRLLIVDS++A FRVD++GRGE ERQQ + +++E N+AV TNQ ++DPG + Sbjct: 101 GIQSMSITEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYIDTEGTFRPDRIRSIAERYGVDADICLENISYARALNSEHQIELVEQLGNELAEGTFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSNLTRVAEDYNIAVFLTNQVQSDPGASALFA 265 HSP 2 Score: 72.4034 bits (176), Expect = 1.025e-60 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 184 EDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYI 390 ED +ID L QGINAGD+ KL+ AGI + ++ T+++LT IKGLSE KVEKI EAA KI +G++ Sbjct: 4 EDSIISIDSLQDQGINAGDINKLKSAGICSITSVLSTTRRNLTKIKGLSEIKVEKIKEAAGKIKKYGFL 72
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_YEAST (Meiotic recombination protein DMC1 OS=Saccharomyces cerevisiae GN=DMC1 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.065e-58 Identity = 92/173 (53.18%), Postives = 119/173 (68.79%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPKKPGRK 935 GI T +ITE FGEFR GKTQ++HTLCV TQLP M GG GKVAYIDTEGTFRP+RI IAE + +DP + L N+ YARA EHQ L+ L ++S +RL++VDS++A FRVD+ GRGE +ERQQ + + +++E NVAV TNQ ++DPG ++ GRK Sbjct: 110 GIMTMSITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYARALNSEHQMELVEQLGEELSSGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNVAVFLTNQVQSDPGASALFAS--ADGRK 280 HSP 2 Score: 72.4034 bits (176), Expect = 2.065e-58 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 199 AIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYI 390 ++D+L + GINA D++KL+ GIYT N ++ T++HL IKGLSE KVEKI EAA KI+ G+I Sbjct: 18 SVDELQNYGINASDLQKLKSGGIYTVNTVLSTTRRHLCKIKGLSEVKVEKIKEAAGKIIQVGFI 81
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: DMC1_SCHPO (Meiotic recombination protein dmc1 OS=Schizosaccharomyces pombe GN=dmc1 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 1.322e-57 Identity = 98/172 (56.98%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEE-PFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGG-GFLSNPKKP 926 GI++ +ITE FGEFR GKTQ++HTLCV QLP +M G GKVA+IDTEGTFRPDRI IAERFG+D ++NII +RAY E Q + L +E+ +RLLIVDS++ALFRVD++GRGE +ERQQ R ISE NVAV TNQ +ADPG F SN +KP Sbjct: 109 GIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAAMMFASNDRKP 280 HSP 2 Score: 64.3142 bits (155), Expect = 1.322e-57 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 166 EDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 E DDE+ +F I+ L + GI D+ KL+ AG+ T G+ M TK+ L IKG SEAKV+K+ EAA K+ + T + Sbjct: 6 EGNDDEQMIFSDIEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRFLLKIKGFSEAKVDKLKEAASKMCPANFSTAME 84
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_YEAST (DNA repair protein RAD51 OS=Saccharomyces cerevisiae GN=RAD51 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 3.814e-57 Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGG-GFLSNPKKP 926 G+ETG+ITE FGEFR+GK+QL HTL V Q+P ++ GG GK YIDTEGTFRP R+V IA+RFG+DP L+N+ YARAY +HQ LL A MSE F L++VDSV+AL+R DF+GRGE + RQ + K Q++++ VAV TNQ A GG F +PKKP Sbjct: 174 GVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVDGGMAFNPDPKKP 344 HSP 2 Score: 64.3142 bits (155), Expect = 3.814e-57 Identity = 35/96 (36.46%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 133 EEQSQLQLVEREDIDDEEDL--FEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLR 414 +EQ++ Q ++ DE L F I+KL GI DVKKL+++G++T + +K L IKG+SEAK +K+ A ++V G++T +D +R Sbjct: 58 QEQAEAQGEMEDEAYDEAALGSFVPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVPMGFVTAADFHMR 153
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_ARATH (DNA repair protein RAD51 homolog 1 OS=Arabidopsis thaliana GN=RAD51 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.156e-56 Identity = 91/168 (54.17%), Postives = 112/168 (66.67%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPK 920 GIETG+ITE +GEFRSGKTQL HTLCV QLP + GG GK YID EGTFRP R++ IA+RFG++ VL+N+ YARAY +HQ LLL A+ M E F LLIVDS AL+R DF+GRGE + RQ + K QK+++ VAV TNQ A G + P+ Sbjct: 119 GIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQ 286 HSP 2 Score: 64.6994 bits (156), Expect = 4.156e-56 Identity = 34/89 (38.20%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 133 EEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGS 399 E++ V+++D ++ + +++L + GI + DVKKL+DAG+ T G+ +K L IKG+S+AKV+KI EAA K+V G+ + S Sbjct: 5 EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASKLVPLGFTSAS 93 The following BLAST results are available for this feature:
BLAST of DY260712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260712 ID=DY260712; Name=DY260712; organism=Citrus clementina; type=EST; length=942bpback to top |