DY260769

Overview
NameDY260769
Unique NameDY260769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length951
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY260769 vs. ExPASy Swiss-Prot
Match: GR1_ARATH (Protein gamma response 1 OS=Arabidopsis thaliana GN=GR1 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.365e-42
Identity = 92/164 (56.10%), Postives = 108/164 (65.85%), Query Frame = 2 
Query:  152 KCPSNVKSAPIAGTKRPASSWRETRSRQYEGGPDPHDDFLDTPFENIRGNLNKVMKEDVHDRPDPAAKDMNLDSSDDETQDMNIDTGRQRQQNPVPTAGKQGFKYVEPVRKKVERENLKGVECKQCKKFYDAVLPSDGGKESDGSKKTLRCEHHEGVSRHRCRH 643
            + P   K   ++G KRPAS WR+TRSRQ  GG DPHDDFLDTP EN++    +V  E+ H   D A KD     SDDETQDMN      RQ+  +    K+ FK+VE VRKK ERENLKG+ECKQCKKFYDAV P + G       K+LRCEHHEGVSRHR R+
Sbjct:  420 RSPGAAKPPQLSGLKRPASIWRDTRSRQSPGGHDPHDDFLDTPIENVK----RVAGEEKHVH-DVAKKD----DSDDETQDMNPKPSPSRQRIQIAETSKKSFKHVESVRKKAERENLKGIECKQCKKFYDAVHPENEG----NGNKSLRCEHHEGVSRHRYRY 570
The following BLAST results are available for this feature:
BLAST of DY260769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GR1_ARATH1.365e-4256.10Protein gamma response 1 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP13YI17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260769 ID=DY260769; Name=DY260769; organism=Citrus clementina; type=EST; length=951bp
CAAACATTCAGATGCTTCTGCTGCTTATTGTGAAAAAAATAAGGTGAAGA
AAGAAGTCGGTTTAAGTGATAACTTGGACAATGAGAAAAAAGCGAAATCA
GTTCAGACCTCAAGCTTCCACTCTTCTTCTTCTGGTTTCATTGTCACAGA
AAAATGCCCTTCAAACGTGAAATCCGCCCCTATAGCTGGTACCAAGAGAC
CGGCATCCTCTTGGAGAGAAACCAGGTCCCGTCAATACGAAGGTGGCCCT
GACCCTCATGATGATTTTCTTGATACTCCCTTTGAGAACATAAGAGGAAA
CTTGAACAAAGTAATGAAAGAAGATGTTCATGATCGGCCTGACCCAGCTG
CAAAAGACATGAACCTTGATAGCTCAGATGACGAAACACAGGATATGAAC
ATTGATACTGGTCGTCAAAGACAGCAGAATCCAGTTCCAACTGCTGGAAA
ACAAGGTTTCAAGTATGTGGAACCGGTGAGAAAAAAGGTTGAACGGGAAA
ATTTGAAAGGAGTTGAATGCAAGCAGTGCAAGAAATTCTATGATGCTGTT
CTTCCCAGTGATGGAGGCAAGGAAAGTGATGGTAGCAAGAAAACTCTGCG
CTGTGAGCATCATGAAGGTGTATCTAGGCATCGGTGTCGCCATTAAAATT
TGAGCATTTTGAAGGGCAAGGGACTTCAGATTGCTTGGCCCATCCTACCC
GCTCCTGGATGCCAGTTTTGATTACGTTAAACAACTTTGGAAAGAAACAA
CAGTTGTAAATTTTATTTGAAAGGTTCTGATCTTCTTCTTCCTTTTAAAT
TTACAAGCAAATAACTGAATATACTGCTTGCACCTTAGAAATATACAATA
AAGGTGAGCATTCATAACTAAAAAAATATAACTAAAAAAATATAAAAAAC
ATCCATCATTTTTATGAACAAGATTGTGTGTTGTTCGAAATGCCTTTTTA
T
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