DY262458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262458 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.084e-60 Identity = 121/273 (44.32%), Postives = 162/273 (59.34%), Query Frame = 2 Query: 275 KRKRKPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTMRRVQQPE-SQAMHAQXXXXXXXXXXXXXXXDANFSIPPALPGLPLQKPGEPVFLYSSRNNASISDHQQEH--------ILSF----SCYHHHRTPMQHELPMKLCTPFEAFNWVKG 1054 K+KR G PDP+AEV++LSPKTL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +R ++EVRKRV+VCPE SC+HH P ALGDL GIKKHF RKH K+W C+KC K YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C + + A H + P+LP P G P + + I+ + +H LS + HH + ++ + + +P E +NWV G Sbjct: 41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKH-GEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTLSLWSGGNINHHQQVTIEDRMAPQPHSPQEDYNWVFG 312
BLAST of DY262458 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 4.028e-57 Identity = 98/156 (62.82%), Postives = 125/156 (80.13%), Query Frame = 2 Query: 275 KRKRKPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEV-RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 739 K+KR GTPDPDA+V++LSP TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +R QEV +K+V++CP +C+HHD ALGDL GIKKH+ RKH K+W C+KC+K YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKH-GEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFC 207
BLAST of DY262458 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 6.871e-57 Identity = 97/155 (62.58%), Postives = 123/155 (79.35%), Query Frame = 2 Query: 275 KRKRKPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 739 K+KR G PDP+AEV++LSP TL+ ++R++CE+C +GFQRDQNLQ+HRR H +PWKL +R ++EVRKRV+VCPE +C+HH ALGDL GIKKHF RKH K+W C+KC K YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C Sbjct: 37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKH-GEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 190
BLAST of DY262458 vs. ExPASy Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.217e-14 Identity = 46/156 (29.49%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 302 PDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVRKRV----------FVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCN-KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 727 P E++ L + +L + C IC +GF+RD NL+MH R H +K + ++ V + CP C H L ++ +K H++R H + K + C +C+ K ++V +D K H K CG C CG FSR + H Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGH 378 The following BLAST results are available for this feature:
BLAST of DY262458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262458 ID=DY262458; Name=DY262458; organism=Citrus clementina; type=EST; length=1312bpback to top |