DY262470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_DROME (Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 5.446e-53 Identity = 136/331 (41.09%), Postives = 182/331 (54.98%), Query Frame = 2 Query: 41 TSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESM---MDKXXXXXXXXXXXXXXXXGKHNKPDAK-KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 T S + + K +KLR K KKT SK S P+ K KK RVWD +S + LD + P NI E + + +D + K K G S F+ I G + ADL+PAL+ ++D L++KNVA EIA KLC+SVAASL+GK++ +F I+S V+ A+ E+LVRIL+P+R IDI+RD +K +PY KSTNLAK+ +WL+++ +V++AACDTFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+ DVVLVDTAGRMQD Sbjct: 177 TGSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE---KAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQD 504 HSP 2 Score: 26.1794 bits (56), Expect = 5.446e-53 Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 964 EALMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071 E LMR+LSKLI +N L + L GNE + V Sbjct: 506 EPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLV 541
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_MOUSE (Signal recognition particle receptor subunit alpha OS=Mus musculus GN=Srpr PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.005e-51 Identity = 129/335 (38.51%), Postives = 183/335 (54.63%), Query Frame = 2 Query: 14 TGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 +G++ G EN + K ++ K GK D + PK+K K RVW+ +K LD++ P NG+ + D G ++ KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI G DVVLVDTAGRMQD Sbjct: 192 SGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGGQLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 525 HSP 2 Score: 23.0978 bits (48), Expect = 1.005e-51 Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1 Query: 970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071 LM AL+KLI +N L + L GNE + V Sbjct: 529 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 562
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_DICDI (Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum GN=srpr PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.424e-50 Identity = 133/341 (39.00%), Postives = 177/341 (51.91%), Query Frame = 2 Query: 2 ESRVTGVANGKENTSSNIGAFDV-----SKLQKLRNKGGKKTDTVVSKGSNPDPKKKIT------------KKNRVWDDSPPESK----LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 E R AN + SS+ + D S ++ N K T V++ N KKK+ KK R W+D K L+ +D NG+ I E MD ++ +AK F F + G +DK DLEP L K L KNVA ++A+K+ +S+ LEGKKLA+F ++S+V+ ME+ + RILTP+R+IDILR+V A K +R PY KSTNLAKV YWL + M+AACDTFRSGA+EQL+THA RL V +FE+GY KD A VA++AI G DVVL+DT GRMQ+ Sbjct: 179 ERRKQNKANNINDISSDDDSDDSDSSSGSDSEENSNGATKNQQTDVARIENSGYKKKVKDTPDKQASSSTGKKARTWEDGKLSKKELEALNRSD--NSNGTEIVREKIQKFNIDMD-------------VSSSDDDDEEEAKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVKGKR-PYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQN 503 HSP 2 Score: 22.3274 bits (46), Expect = 1.424e-50 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 964 EALMRALSKLIYLNIQTLSWLSEKLLWGNE 1053 E LM+ALSKL+ N L + L GN+ Sbjct: 505 EPLMKALSKLVNQNNVDLVLFVGEALVGND 534
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_BOVIN (Signal recognition particle receptor subunit alpha OS=Bos taurus GN=SRPR PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.355e-50 Identity = 122/304 (40.13%), Postives = 165/304 (54.28%), Query Frame = 2 Query: 125 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE-------VEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 SK S D PK+K K RVW S + LD++ P + G + D KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI G DVVLVDTAGRMQD Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEAAPPEDINLIRGTGPGRQLQDLDCSSSDDEGAAQ-----NSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 528 HSP 2 Score: 23.0978 bits (48), Expect = 5.355e-50 Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1 Query: 970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071 LM AL+KLI +N L + L GNE + V Sbjct: 532 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 565
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_HUMAN (Signal recognition particle receptor subunit alpha OS=Homo sapiens GN=SRPR PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.186e-49 Identity = 124/329 (37.69%), Postives = 175/329 (53.19%), Query Frame = 2 Query: 74 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAG----------------GNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 K ++ K G+ + + PK+K K RVW+ +K LD++ P G GS +++ D S KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI G DVVLVDTAGRMQD Sbjct: 213 KREEFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSEDINLIRGTGSGGQLQDLDCSSS--------------DDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 527 HSP 2 Score: 23.0978 bits (48), Expect = 1.186e-49 Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1 Query: 970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071 LM AL+KLI +N L + L GNE + V Sbjct: 531 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 564
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_CANFA (Signal recognition particle receptor subunit alpha OS=Canis familiaris GN=SRPR PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 4.461e-49 Identity = 123/335 (36.72%), Postives = 178/335 (53.13%), Query Frame = 2 Query: 74 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVW----------------------DDSPPE--SKLDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 K ++ K G+ + + PK+K K RVW D +PPE + + T P GG +++ ++D E+ + +KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVE +RTH RRL V +FEKGY KD A +A EAI G DVVLVDTAGRMQD Sbjct: 213 KREEFIQKHGRGLEKSSKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTTNGAPDAAPPEDINLIRGTGP-GGQLQDLDCSSSDDEETAQNA-------------------SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 527 HSP 2 Score: 23.0978 bits (48), Expect = 4.461e-49 Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1 Query: 970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071 LM AL+KLI +N L + L GNE + V Sbjct: 531 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 564
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_SCHPO (Signal recognition particle receptor subunit alpha homolog OS=Schizosaccharomyces pombe GN=srp101 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.460e-40 Identity = 104/316 (32.91%), Postives = 157/316 (49.68%), Query Frame = 2 Query: 89 RNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK---LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAA-KEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQDMKR**GHCQSLSTST 1006 +N+ K SK +N K K K+ R WDD E + L+++ A ++ +K + K S+F ++ G L + DL P LK +++ L KNVA IA +LCESV ASL KK+ SF + + V A + L +ILTP S+D+L + + K + +PY KST LAK+AYWLL + +++AACDTFRSGA+EQL H + LQ + +F +GY KD + V K A++ ++ DV+L+DTAGR + +R G + + +T Sbjct: 146 KNEYEMKKKGAQSKQTNAPKKGK--KQLRKWDDQITEEEQAALNYSSQASSASQTVDNSQLSSIVGNNNKFQKTGSGDVIISDLEMDPNQTISNKSASSAFSLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTVKNTVNKAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSNNFRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQNSFDVILIDTAGRRHNDQRLMGSLEKFTKAT 459
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_YEAST (Signal recognition particle receptor subunit alpha homolog OS=Saccharomyces cerevisiae GN=SRP101 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 2.042e-34 Identity = 101/331 (30.51%), Postives = 165/331 (49.85%), Query Frame = 2 Query: 80 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNK----PDAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQR------KPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKGYEKDPAI--VAKEAIQEGTRHGSDVVLVDTAGR 952 +KLR+ GKK T N +K + + D+ E +KLDF+ N S + +++ + +S D+ ++ +AK +G+ S+ F + + G ++++DL+ L+ L +L+TKNVA E A+ L + V+ L G K A++T + + + ++ +AL +ILTP S+D+LR++ + + ++ PY KSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L V +FE GY + +AK+AI+ D+VL+DTAGR Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVALDSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGNEAKNSGYVSTAFGFLQKHVLGNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGR 514
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: DOCK_SULAC (Probable signal recognition particle protein OS=Sulfolobus acidocaldarius GN=dpa PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.767e-23 Identity = 67/206 (32.52%), Postives = 113/206 (54.85%), Query Frame = 2 Query: 338 GKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRM 955 G+ NK + K+ S F + K + + DL ++ L+ +L+ +V+ E+ EK+ E + +L GKK++ + IV +++++ ILT + D++ + ++ +KP+ K+T +AKV L ++ +S ++AA DTFR+ A EQL HA +L+V + Y DPA VA +AI DVVL+DTAGRM Sbjct: 70 GQENKQENKR-----SFFDFLKYKT-IKEDDLNDVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSG--KKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRM 267
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: Y291_METJA (Probable signal recognition particle protein MJ0291 OS=Methanocaldococcus jannaschii GN=MJ0291 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.793e-22 Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 428 DLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 D+E L+ L+ L+ +VA E+ EKL E++ L G+K++ + I A++ A+ IL+ + IDI + K + KP K+T +AK+AY L Q SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ G DVVL DTAGR Sbjct: 122 DIEDVLEELEIALLEADVALEVVEKLIENIKNELVGRKISPDDNVEEITINAVKNAIKNILSQEK-IDIEEIIKKNKAEGKPTVIVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIKHKPGADSAAVIYDAIQHAKARGIDVVLADTAGR 295 The following BLAST results are available for this feature:
BLAST of DY262470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262470 ID=DY262470; Name=DY262470; organism=Citrus clementina; type=EST; length=1266bpback to top |