DY262470

Overview
NameDY262470
Unique NameDY262470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1266
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6699 contig Ccv1_Contig6699:902..2167. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_DROME (Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.446e-53
Identity = 136/331 (41.09%), Postives = 182/331 (54.98%), Query Frame = 2
Query:   41 TSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESM---MDKXXXXXXXXXXXXXXXXGKHNKPDAK-KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961
            T S +    + K +KLR K    KKT    SK S P+   K  KK RVWD   +S   + LD +   P      NI  E     + +   +D                  +      K K G   S F+ I G   +  ADL+PAL+ ++D L++KNVA EIA KLC+SVAASL+GK++ +F  I+S V+ A+ E+LVRIL+P+R IDI+RD   +K   +PY           KSTNLAK+ +WL+++  +V++AACDTFR+GAVEQLRTH R L              V ++EKGY KD A +A EAI+       DVVLVDTAGRMQD
Sbjct:  177 TGSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE---KAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQD 504          

HSP 2 Score: 26.1794 bits (56), Expect = 5.446e-53
Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 1
Query:  964 EALMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071
            E LMR+LSKLI +N   L     + L GNE  +  V
Sbjct:  506 EPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLV 541          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_MOUSE (Signal recognition particle receptor subunit alpha OS=Mus musculus GN=Srpr PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.005e-51
Identity = 129/335 (38.51%), Postives = 183/335 (54.63%), Query Frame = 2
Query:   14 TGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961
            +G++ G EN   +       K ++   K GK  D       +  PK+K  K  RVW+     +K  LD++ P   NG+     + D                        G  ++ KP A K   G    M + + G  +L + D+E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+  A+ +++PY           KSTNLAK+++WLL++  SV++AACDTFR+GAVEQLRTH RRL              V +FEKGY KD A +A EAI      G DVVLVDTAGRMQD
Sbjct:  192 SGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGGQLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 525          

HSP 2 Score: 23.0978 bits (48), Expect = 1.005e-51
Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1
Query:  970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071
            LM AL+KLI +N   L     + L GNE  +  V
Sbjct:  529 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 562          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_DICDI (Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum GN=srpr PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.424e-50
Identity = 133/341 (39.00%), Postives = 177/341 (51.91%), Query Frame = 2
Query:    2 ESRVTGVANGKENTSSNIGAFDV-----SKLQKLRNKGGKKTDTVVSKGSNPDPKKKIT------------KKNRVWDDSPPESK----LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961
            E R    AN   + SS+  + D      S  ++  N   K   T V++  N   KKK+             KK R W+D     K    L+ +D    NG+ I  E        MD                    ++ +AK    F   F  + G   +DK DLEP L   K  L  KNVA ++A+K+ +S+   LEGKKLA+F  ++S+V+  ME+ + RILTP+R+IDILR+V A K +R PY           KSTNLAKV YWL  +    M+AACDTFRSGA+EQL+THA RL V +FE+GY KD A VA++AI      G DVVL+DT GRMQ+
Sbjct:  179 ERRKQNKANNINDISSDDDSDDSDSSSGSDSEENSNGATKNQQTDVARIENSGYKKKVKDTPDKQASSSTGKKARTWEDGKLSKKELEALNRSD--NSNGTEIVREKIQKFNIDMD-------------VSSSDDDDEEEAKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVKGKR-PYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQN 503          

HSP 2 Score: 22.3274 bits (46), Expect = 1.424e-50
Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 1
Query:  964 EALMRALSKLIYLNIQTLSWLSEKLLWGNE 1053
            E LM+ALSKL+  N   L     + L GN+
Sbjct:  505 EPLMKALSKLVNQNNVDLVLFVGEALVGND 534          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_BOVIN (Signal recognition particle receptor subunit alpha OS=Bos taurus GN=SRPR PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.355e-50
Identity = 122/304 (40.13%), Postives = 165/304 (54.28%), Query Frame = 2
Query:  125 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE-------VEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961
            SK S  D PK+K  K  RVW    S  +  LD++ P                +     G  + D                     KP A K   G    M + + G  +L + D+E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+  A+  ++PY           KSTNLAK+++WLL++  SV++AACDTFR+GAVEQLRTH RRL              V +FEKGY KD A +A EAI      G DVVLVDTAGRMQD
Sbjct:  230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEAAPPEDINLIRGTGPGRQLQDLDCSSSDDEGAAQ-----NSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 528          

HSP 2 Score: 23.0978 bits (48), Expect = 5.355e-50
Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1
Query:  970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071
            LM AL+KLI +N   L     + L GNE  +  V
Sbjct:  532 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 565          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_HUMAN (Signal recognition particle receptor subunit alpha OS=Homo sapiens GN=SRPR PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.186e-49
Identity = 124/329 (37.69%), Postives = 175/329 (53.19%), Query Frame = 2
Query:   74 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAG----------------GNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961
            K ++   K G+  +       +  PK+K  K  RVW+     +K  LD++ P                  G GS  +++  D   S                        KP A K   G    M + + G  +L + D+E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+  A+ +++PY           KSTNLAK+++WLL++  SV++AACDTFR+GAVEQLRTH RRL              V +FEKGY KD A +A EAI      G DVVLVDTAGRMQD
Sbjct:  213 KREEFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSEDINLIRGTGSGGQLQDLDCSSS--------------DDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 527          

HSP 2 Score: 23.0978 bits (48), Expect = 1.186e-49
Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1
Query:  970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071
            LM AL+KLI +N   L     + L GNE  +  V
Sbjct:  531 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 564          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_CANFA (Signal recognition particle receptor subunit alpha OS=Canis familiaris GN=SRPR PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.461e-49
Identity = 123/335 (36.72%), Postives = 178/335 (53.13%), Query Frame = 2
Query:   74 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVW----------------------DDSPPE--SKLDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961
            K ++   K G+  +       +  PK+K  K  RVW                      D +PPE  + +  T P GG   +++  ++D  E+  +                    +KP A K   G    M + + G  +L + D+E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+  A+  ++PY           KSTNLAK+++WLL++  SV++AACDTFR+GAVE +RTH RRL              V +FEKGY KD A +A EAI      G DVVLVDTAGRMQD
Sbjct:  213 KREEFIQKHGRGLEKSSKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTTNGAPDAAPPEDINLIRGTGP-GGQLQDLDCSSSDDEETAQNA-------------------SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQD 527          

HSP 2 Score: 23.0978 bits (48), Expect = 4.461e-49
Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1
Query:  970 LMRALSKLIYLNIQTLSWLSEKLLWGNECCELTV 1071
            LM AL+KLI +N   L     + L GNE  +  V
Sbjct:  531 LMTALAKLITVNTPDLVLFVGEALVGNEAVDQLV 564          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_SCHPO (Signal recognition particle receptor subunit alpha homolog OS=Schizosaccharomyces pombe GN=srp101 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.460e-40
Identity = 104/316 (32.91%), Postives = 157/316 (49.68%), Query Frame = 2
Query:   89 RNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK---LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAA-KEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQDMKR**GHCQSLSTST 1006
            +N+   K     SK +N   K K  K+ R WDD   E +   L+++  A      ++           +K                  +     K      S+F ++ G   L + DL P LK +++ L  KNVA  IA +LCESV ASL  KK+ SF  + + V  A  + L +ILTP  S+D+L  + +  K + +PY           KST LAK+AYWLL +   +++AACDTFRSGA+EQL  H + LQ      + +F +GY KD + V K A++   ++  DV+L+DTAGR  + +R  G  +  + +T
Sbjct:  146 KNEYEMKKKGAQSKQTNAPKKGK--KQLRKWDDQITEEEQAALNYSSQASSASQTVDNSQLSSIVGNNNKFQKTGSGDVIISDLEMDPNQTISNKSASSAFSLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTVKNTVNKAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSNNFRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQNSFDVILIDTAGRRHNDQRLMGSLEKFTKAT 459          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRPR_YEAST (Signal recognition particle receptor subunit alpha homolog OS=Saccharomyces cerevisiae GN=SRP101 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.042e-34
Identity = 101/331 (30.51%), Postives = 165/331 (49.85%), Query Frame = 2
Query:   80 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNK----PDAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQR------KPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKGYEKDPAI--VAKEAIQEGTRHGSDVVLVDTAGR 952
            +KLR+  GKK  T      N    +K  +   + D+   E  +KLDF+     N S + +++  + +S  D+                   ++     +AK +G+ S+ F    + + G   ++++DL+  L+ L  +L+TKNVA E A+ L + V+  L G K A++T + +  + ++ +AL +ILTP  S+D+LR++ + + ++       PY           KSTNL+K+A+WLLQ+   V++ ACDTFRSGAVEQLR H   L                       V +FE GY     +  +AK+AI+       D+VL+DTAGR
Sbjct:  189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVALDSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGNEAKNSGYVSTAFGFLQKHVLGNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGR 514          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: DOCK_SULAC (Probable signal recognition particle protein OS=Sulfolobus acidocaldarius GN=dpa PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.767e-23
Identity = 67/206 (32.52%), Postives = 113/206 (54.85%), Query Frame = 2
Query:  338 GKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRM 955
            G+ NK + K+     S F  +  K  + + DL   ++ L+ +L+  +V+ E+ EK+ E +  +L GKK++    +  IV   +++++  ILT  +  D++  + ++   +KP+           K+T +AKV   L ++ +S ++AA DTFR+ A EQL  HA +L+V +    Y  DPA VA +AI        DVVL+DTAGRM
Sbjct:   70 GQENKQENKR-----SFFDFLKYKT-IKEDDLNDVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSG--KKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRM 267          
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: Y291_METJA (Probable signal recognition particle protein MJ0291 OS=Methanocaldococcus jannaschii GN=MJ0291 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.793e-22
Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 2
Query:  428 DLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952
            D+E  L+ L+  L+  +VA E+ EKL E++   L G+K++    +  I   A++ A+  IL+  + IDI   +   K + KP            K+T +AK+AY L Q   SV++AA DTFR+GA+EQL  HA+ + V + +     D A V  +AIQ     G DVVL DTAGR
Sbjct:  122 DIEDVLEELEIALLEADVALEVVEKLIENIKNELVGRKISPDDNVEEITINAVKNAIKNILSQEK-IDIEEIIKKNKAEGKPTVIVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIKHKPGADSAAVIYDAIQHAKARGIDVVLADTAGR 295          
The following BLAST results are available for this feature:
BLAST of DY262470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
SRPR_DROME5.446e-5341.09Signal recognition particle receptor subunit alpha... [more]
SRPR_MOUSE1.005e-5138.51Signal recognition particle receptor subunit alpha... [more]
SRPR_DICDI1.424e-5039.00Signal recognition particle receptor subunit alpha... [more]
SRPR_BOVIN5.355e-5040.13Signal recognition particle receptor subunit alpha... [more]
SRPR_HUMAN1.186e-4937.69Signal recognition particle receptor subunit alpha... [more]
SRPR_CANFA4.461e-4936.72Signal recognition particle receptor subunit alpha... [more]
SRPR_SCHPO1.460e-4032.91Signal recognition particle receptor subunit alpha... [more]
SRPR_YEAST2.042e-3430.51Signal recognition particle receptor subunit alpha... [more]
DOCK_SULAC2.767e-2332.52Probable signal recognition particle protein OS=Su... [more]
Y291_METJA1.793e-2237.71Probable signal recognition particle protein MJ029... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100AC07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262470 ID=DY262470; Name=DY262470; organism=Citrus clementina; type=EST; length=1266bp
AGAATCTAGGGTAACAGGTGTTGCTAACGGTAAAGAAAATACTAGTTCTA
ATATTGGGGCTTTTGATGTAAGTAAGTTACAGAAGTTAAGAAATAAAGGT
GGTAAGAAAACTGATACTGTTGTTAGCAAGGGTTCAAATCCAGACCCAAA
GAAAAAGATAACAAAGAAGAACAGAGTTTGGGACGATTCGCCTCCAGAGT
CCAAATTGGACTTCACGGATCCTGCAGGTGGAAATGGCAGTAATATCGAG
GTTGAGGCAGCAGATCATGGTGAAAGTATGATGGACAAGGAAGAGGTTTT
CAGCAGTGATAGTGAATCCGAAGAAGATGAAGAAGTGGGTAAGCACAACA
AGCCTGATGCTAAGAAGACGGGCTGGTTTTCATCTATGTTCCAGAGTATT
GCTGGAAAGGCAAACTTGGATAAGGCAGACCTTGAACCCGCTCTGAAAGC
TCTCAAGGATAGGCTCATGACCAAGAATGTTGCTGAGGAGATAGCTGAGA
AACTTTGTGAATCAGTTGCAGCAAGTCTTGAAGGCAAAAAGCTGGCCTCA
TTTACAAGGATTTCTTCAATTGTGCAGGCTGCAATGGAAGAGGCTCTTGT
TCGCATTTTAACTCCTAGGCGTTCCATTGATATATTAAGAGATGTTCACG
CTGCCAAGGAACAACGGAAGCCATATGTAGTTGTTTTCGTTGGTGTTAAT
GGAGTTGGGAAATCTACCAACCTAGCTAAGGTAGCTTACTGGCTTCTTCA
GCACAAGGTCAGTGTTATGATGGCTGCATGTGATACATTCCGCTCTGGCG
CTGTCGAACAGTTGCGAACTCACGCACGCAGGCTCCAGGTCCCTATATTT
GAAAAGGGCTATGAAAAAGATCCTGCAATTGTTGCAAAGGAAGCTATCCA
GGAAGGCACACGGCATGGCTCTGATGTTGTTCTTGTTGATACAGCTGGTC
GGATGCAGGATATGAAGCGCTGATGAGGGCACTGTCAAAGCTTATCTACC
TCAACATCCAGACCTTGTCCTGGTTGTCGGAAAAGCTCCTGTGGGGGAAT
GAATGCTGTGAATTAACTGTTCTAAGTTCAACCAAAAATTAACTTGACCT
GTCGTCCTTCTCCTAATCCCAAAATTGGATTGGAGGGGAAATTTGCTCCA
CTAAAATTTAAAAAAAATTTGAAGGAAAAAGGTGTGGGACCACCCATTTA
CCAAAGTGGGTTTTTTGTTGTCGGGGGAAACCCCCCGGGGAAAGTGTTTC
TTTTTGGGAGAGGGGG
back to top