DY262472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 5.936e-40 Identity = 115/349 (32.95%), Postives = 177/349 (50.72%), Query Frame = 3 Query: 81 RFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIELAIKG--KFDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEXVEKIRKLSETGKLKIPVE*NIHMTQV 1046 R + TTS R+ V+P ++G EVL N+ +P + PNEV+++ A S+NP+D MRSGYG + +PL PL LGRD+SG V G V+ G EV+ A+ P +GT +++ V+S +E++ KP S+TH A+++P+ ALTAW A+ +S+ G+R Q A G HV+A C + + V GA + +DY+ +E +K FD +LD +G TE LNFLK+ G Y+TL D G+A G L TV K W G+ Y + + A +++I +L + GK++ +E ++V Sbjct: 31 RGISTTSARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWK-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVGG-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLW--QGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIERTFPFSEV 375
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.936e-40 Identity = 113/341 (33.14%), Postives = 174/341 (51.03%), Query Frame = 3 Query: 78 VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIELAIKGK--FDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEXVEKIRKLSETGKLKIPVE 1022 VR + TTS R+ V+P ++G EVL N+ +P + PNEV+++ A SINP+D MRSGYG + +PL PL LGRD+SG V G VR G EV+ A+ P +GT +++ V+S +E++ KP S+TH A+++P+ ALTAW A+ +++ G+R Q A HV+A C + + V GA +DY S ++E +K FD +LD +G TE L FLK+ G Y+TL D G+A G+ + T V + + + G+ Y + + A ++ I +L E GK++ +E Sbjct: 30 VRKISTTSPRSTVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVGG-STETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKTLKHFWQGVHYRWAFFMASGPCLDDIAELVEAGKIQPVIE 367
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 9.477e-38 Identity = 110/341 (32.26%), Postives = 173/341 (50.73%), Query Frame = 3 Query: 78 VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIELAIKG--KFDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEXVEKIRKLSETGKLKIPVE 1022 VR + TTS R+ V+P ++G EVL N+ +P + PNEV+V+ A S+NP+D MRSGYG + +PL PL LGRD+SG V G V+ G EV+ A+ P +GT +++ V+S +E++ KP S+TH A+++P+ ALTAW A+ +++ G+R Q A HV+A C + + V GA +DY S +E +K FD +LD +G TE +FLK+ G Y+TL D G+A G+ + T V + + + G+ Y + + A ++ I +L + GK++ +E Sbjct: 30 VRRISTTSPRSTVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIE 367
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.416e-33 Identity = 101/339 (29.79%), Postives = 170/339 (50.15%), Query Frame = 3 Query: 108 AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSV----ASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIELAIKG--KFDAVLDTIGAPETERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEXVEKIRKLSETGKLKIPVE*NIHMTQVKKTHE 1061 A V+ ++G +VL N +P + PNEV+V+ A +NP+D MR GYG + +PL PLILGRD+SGE+ G V+ G +V+ A+ P +G+ A++ V+S +E++ KP S+ H +A++IP+ A TAW A+ +++ F++ A G HV+ TC + V GA VDY++ +E +K KFD +LD+IG ETE+ L+ LK G ++TL D GLA G+ + + V + ++ G+ Y + + ++++ ++ + GK++ VE QV + + Sbjct: 31 AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWK-QGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGG-ETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGM-MQSAVTVGCKVVKNLRKGVHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPEAFQ 366
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: RT4I1_DICDI (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.991e-28 Identity = 89/322 (27.64%), Postives = 157/322 (48.76%), Query Frame = 3 Query: 138 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL--PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA----LKCAARMSEGQRXXXXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAGAV-QAVDYSSKDIELAIKGKFDAVLDTI----GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL--KKRMQTWYSYGIDYSYIYMRADAEXVEKIRKLSETGKLKIPVE*NIHMTQVKKTH 1058 ++LE + ++ VP ++VL++ + SINPLD MR GY SI + L P+ILGR+ SGE+ +G SV +G +V+ A P ++ G++ +Y + E E++ KP ++TH +++IPFA+LTAW A L +++ + Q + VS TC K +++ V + +DY++ I KFD + + E E+ ++ LK GG+ + +G +D G+ GLP+ L +R++ YS + Y +++I KL E L ++ ++ Q+K + Sbjct: 14 DLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLKLKLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSM-GSHCEYITVDESEISLKPKNLTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLKKHLNVNQVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDNDNNKFDLIFNCYDGGKNQNENEKKCIDALKDGGNLIGFNGPLVKFSDKDGVLSGLPMGMMNQLNSSERIKKQYSKNVHLDYAIFSPSGSTLKQISKLYENNILIPNIDKQFNLNQIKDAY 334
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.918e-22 Identity = 73/247 (29.55%), Postives = 125/247 (50.61%), Query Frame = 3 Query: 105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFS--VASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG 824 +A V +GG +VL++ N+ VP++K ++VL++ A ++NP+D + R G ++ P LP + G D++G V VG++V+ L G EV+ + A+ G+ A+Y + E L KP ++ A A+ +P A TA L S G+ Q + V V+AT ++ ++ V + GA A+DY+ ++IE + K+D V D IG + + +K GG + L G Sbjct: 79 KAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSP-LPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGL-VRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIE-DLPDKYDVVFDAIGMCDK---AVKVIKEGGKVVALTG 319
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.224e-20 Identity = 62/197 (31.47%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM-----SEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKD 704 GG + L+ V VPD K +E+L++ A ++NP+D +++ G R + P I G D++GEV G++V G +V L A G A+YAV E+ +P V+ A+ +A+P AALTA +AL A + E + Q + HV+ATCG++++D V GA + +DY + + Sbjct: 16 GGTDALK-HVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVL-SHATGGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLDFVKGLGADEVLDYKTPE 210
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.195e-18 Identity = 72/247 (29.15%), Postives = 123/247 (49.80%), Query Frame = 3 Query: 105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAVQAVDYSSKD----IELAIKGK---FDAVLDTIGAPETERLGLNFLKRGGHYMTL 818 RA+ + FGGPEVL+++ +V VP + ++VL++ A +NP++T +RSG Y R +P LP G D++G + +VG V + G VF + V G YA++A+ ++D + P P ++ +A+ TA RAL +AR G+ Q + A G V T GS+ + VL GA + ++ + I++++ K D +++ + A E L L GG + + Sbjct: 9 RAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR---KPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCY---STVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEML-ANENLSNDLKLLSHGGRVVVV 248
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.195e-18 Identity = 68/244 (27.87%), Postives = 113/244 (46.31%), Query Frame = 3 Query: 105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAV------DYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 818 RA+ + FGGPEVL+++ +V VP K ++VL++ +A +NP+DT +RSG +PLLP G D++G + AVG SV + G VF + G YA+YA+ ++ + P + +AI TA+RAL +A + G+ Q + A G V T ++ +++ V DY K + + D +++ + LN L GG + + Sbjct: 9 RAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHN--IKPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTT---RTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSN-DLNLLSHGGRVIVV 246
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.867e-18 Identity = 70/245 (28.57%), Postives = 120/245 (48.98%), Query Frame = 3 Query: 105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAVQA-----VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 818 RAV + FGGPEVL++R ++ VP K ++VL++ A +NP++T +RSG Y R +PLLP G D++G + AVG + + G VF + + + G YA+YA+ ++ + P + +AI TA+RAL +A + G+ Q + A G + T G++ + VL GA + V+Y K + + D +++ + + L+ L GG + + Sbjct: 9 RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR---KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSK-DLSLLSHGGRVIVV 246 The following BLAST results are available for this feature:
BLAST of DY262472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262472 ID=DY262472; Name=DY262472; organism=Citrus clementina; type=EST; length=1329bpback to top |