DY262476

Overview
NameDY262476
Unique NameDY262476
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1341
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262476_ssr1316 microsatellite DY262476_ssr1316:1316..1325. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 8.638e-55
Identity = 104/206 (50.49%), Postives = 141/206 (68.45%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVSQKENGLLELT 904
            +DHF FAD+ TF QRYL+   HW      G I  Y GNEGDI WF  N+GF+WD+A    AMLVF EHRYYGES+P+G    +++++  L++LT+EQALADFA  I +L++ +  A+  PV+  GGSYGGMLAAW R+KYPHI +GALA+SAPI Q + +VP   F  IV++DF++    C  +I++SW  +  +S   +GL  LT
Sbjct:   55 VDHFGFADMRTFKQRYLVADKHW--QRNGGSILFYTGNEGDIVWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGQD--SFKDSQHLNFLTSEQALADFAELIRHLEKTIPGAQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPIWQLDGMVPCGEFMKIVTNDFRKSGPYCSESIRKSWNVIDKLSGSGSGLQSLT 256          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 9.887e-55
Identity = 105/206 (50.97%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVSQKENGLLELT 904
            +DHF F  + TF+QRYL+   +W      G I  Y GNEGDI WF  N+GF+WD+A    AMLVF EHRYYGES+P+G     ++++  L++LT+EQALADFA  I +LK+ +  AE  PV+  GGSYGGMLAAW R+KYPH+ +GALA+SAPI QFED+VP   F  IV++DF++    C  +I+ SW  +  +S   +GL  LT
Sbjct:   57 VDHFGFNTVKTFNQRYLVADKYW--KKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDN--TFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIRRSWDAINRLSNTGSGLQWLT 258          

HSP 2 Score: 22.3274 bits (46), Expect = 9.887e-55
Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 3
Query:  912 SPMSGVNSTEDLADWFESAYSYLAMVEY 995
            SP++     + L DW    +  LAMV+Y
Sbjct:  265 SPLTS-QDIQHLKDWISETWVNLAMVDY 291          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.680e-54
Identity = 105/206 (50.97%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVSQKENGLLELT 904
            +DHF F  + TF+QRYL+   +W      G I  Y GNEGDI WF  N+GF+WD+A    AMLVF EHRYYGES+P+G    +++++  L++LT+EQALADFA  I +LK+ +  AE  PV+  GGSYGGMLAAW R+KYPH+ +GALA+SAPI QFED+VP   F  IV++DF++    C  +I  SW  +  +S   +GL  LT
Sbjct:   57 VDHFGFNTVKTFNQRYLVADKYW--KKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDN--SFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIHRSWDAINRLSNTGSGLQWLT 258          

HSP 2 Score: 22.3274 bits (46), Expect = 1.680e-54
Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 3
Query:  912 SPMSGVNSTEDLADWFESAYSYLAMVEY 995
            SP++     + L DW    +  LAMV+Y
Sbjct:  265 SPLTS-QDIQHLKDWISETWVNLAMVDY 291          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.985e-52
Identity = 104/207 (50.24%), Postives = 138/207 (66.67%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVSQKENGLLELTK 907
            +DHF F    TF QRYLI  ++W      G I  Y GNEGDI WF  N+GF+WDIA    AMLVF EHRYYGES+P+G+   ++ ++  L++LT EQALADFA  I  LK+ +  A    V+  GGSYGGMLAAW R+KYPH+ +GALASSAPI QF D+VP + F  IV++DF +   +C  +I+ SW  +  +++K  GL  L++
Sbjct:   59 VDHFGFNIDRTFKQRYLIADNYWKEDG--GSILFYTGNEGDIIWFCNNTGFMWDIAEEMKAMLVFAEHRYYGESLPFGAD--SFSDSRHLNFLTTEQALADFAKLIRYLKRTIPGARNQHVIALGGSYGGMLAAWFRMKYPHLVVGALASSAPIWQFNDLVPCDIFMKIVTTDFSQSGPNCSESIRRSWDAINRLAKKGTGLRWLSE 261          

HSP 2 Score: 23.0978 bits (48), Expect = 1.985e-52
Identity = 8/28 (28.57%), Postives = 15/28 (53.57%), Query Frame = 3
Query:  912 SPMSGVNSTEDLADWFESAYSYLAMVEY 995
            +P++     + L DW    +  +AMV+Y
Sbjct:  267 TPLTKSQDVQRLKDWISETWVNVAMVDY 294          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: DPP2_RAT (Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.916e-42
Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 2
Query:  290 LDHFSFADLP--TFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG--STEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862
            +DHF+F      TF QR+L++   W      GPIF Y GNEGDI   A NSGF+ ++A +  A+LVF EHRYYG+S+P+G  ST+  Y        LT EQALADFAV +  L+ NL  + +P + FGGSYGGML+A+MR+KYPH+  GALA+SAP++    +  P+ F+  V++DF  +S  C   +++++ ++
Sbjct:   50 MDHFNFESFSNKTFGQRFLVSDKFWKMGE--GPIFFYTGNEGDIWSLANNSGFIVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQL-----LTVEQALADFAVLLQALRHNLGVQDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPDQFFRDVTADFYGQSPKCAQAVRDAFQQI 237          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 8.386e-42
Identity = 89/193 (46.11%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  290 LDHFSFADL--PTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862
            LDHF+F      TF QR+L++   WV     GPIF Y GNEGD+  FA NS FV ++A   GA+LVF EHRYYG+S+P+G+     Q   T   LT EQALADFA  +  L+++L A+ +P + FGGSYGGML+A++R+KYPH+  GALA+SAP+L    +     F+  V++DF+ +S  C   ++E++ ++
Sbjct:   40 LDHFNFERFGNKTFPQRFLVSDRFWVRGE--GPIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQST--QRGHT-ELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEGQSPKCTQGVREAFRQI 227          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 7.099e-41
Identity = 88/195 (45.13%), Postives = 126/195 (64.62%), Query Frame = 2
Query:  290 LDHFSFADL--PTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG--STEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862
            +DHF+F      TF QR+L++   W      GPIF Y GNEGDI  FA NSGF+ ++A +  A+LVF EHRYYG+S+P+G  ST+  Y        LT EQALADFAV +  L+Q+L    +P + FGGSYGGML+A+MR+KYPH+  GALA+SAP++    +     F+  V++DF  +S  C   +++++ ++
Sbjct:   50 MDHFNFESFGNKTFGQRFLVSDKFWKMGE--GPIFFYTGNEGDIWSFANNSGFMVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQL-----LTVEQALADFAVLLQALRQDLGVHDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAVAGLGDSYQFFRDVTADFYGQSPKCAQAVRDAFQQI 237          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: PCP5_CAEEL (Prolyl carboxy peptidase like protein 5 OS=Caenorhabditis elegans GN=pcp-5 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.895e-39
Identity = 84/202 (41.58%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL--SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVSQKENG 889
            +D F+F +   F  RY +N DH+      GPI  Y GNEG +E FA N+GF+WD+AP   A +VF EHR+YG+S P+ +   +Y +   L YL+++QALADFA+ +   K      A+ S V+ FGGSYGGML+AW R+KYPHI  GA+A+SAP+  F D   PE  Y+ + +    ++      I++ W  L  +++ ++G
Sbjct:   50 IDPFAFTNDLEFDLRYFLNIDHY---ETGGPILFYTGNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPFKNE--SYTDIRHLGYLSSQQALADFALSVQFFKNEKIKGAQKSAVIAFGGSYGGMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDFIVTRAFLDAGCNRKAIEKGWIALDELAKSDSG 246          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: PCP1_CAEEL (Putative serine protease pcp-1 OS=Caenorhabditis elegans GN=pcp-1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 2.613e-35
Identity = 82/207 (39.61%), Postives = 121/207 (58.45%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS------AEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE-DIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVSQKENG 889
            LDHF++ D  TF  R + N   +      GPIF Y GNEG +E F   +G ++D+AP F A ++F EHR+YG++ P+G+   +Y +   + YLT+EQALAD+A  +T LK++ +        A+ V+ FGGSYGGML+AW R KYPHI  GA A SAP++      V P  F +I S  +     + F  +  +W   +++S  + G
Sbjct:   51 LDHFTWGDTRTFDMRVMWNNTFYKPG---GPIFFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQPFGNQ--SYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQKYPHIVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTYIDNGCNRF-ILANAWNATLNLSSTDAG 251          
BLAST of DY262476 vs. ExPASy Swiss-Prot
Match: TSSP_HUMAN (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 2.896e-26
Identity = 68/155 (43.87%), Postives = 97/155 (62.58%), Query Frame = 2
Query:  290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ--NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 748
            LD F+ +D  +F QRY +N  HWVG +  GPIFL+ G EG +   +V  G    +AP +GA+++  EHR+YG S+P G  E+A      L +L++  ALAD       L +  N+S+ +SP + FGGSY G LAAW RLK+PH+   ++ASSAP+
Sbjct:   66 LDPFNVSDRRSFLQRYWVNDQHWVGQD--GPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQ-----LRFLSSRLALADVVSARLALSRLFNISS-SSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPV 212          
The following BLAST results are available for this feature:
BLAST of DY262476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PCP_MOUSE8.638e-5550.49Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
PCP_PONAB9.887e-5550.97Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]
PCP_HUMAN1.680e-5450.97Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
PCP_BOVIN1.985e-5250.24Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
DPP2_RAT4.916e-4245.13Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp... [more]
DPP2_HUMAN8.386e-4246.11Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
DPP2_MOUSE7.099e-4145.13Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=... [more]
PCP5_CAEEL3.895e-3941.58Prolyl carboxy peptidase like protein 5 OS=Caenorh... [more]
PCP1_CAEEL2.613e-3539.61Putative serine protease pcp-1 OS=Caenorhabditis e... [more]
TSSP_HUMAN2.896e-2643.87Thymus-specific serine protease OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262476 ID=DY262476; Name=DY262476; organism=Citrus clementina; type=EST; length=1341bp
CGACATCTAACAGTTTAACAGACGAGCTATCTTTCTCAGTCCTCACTGTC
GCTGAACGCCGAAATTGACAATGCCAAAAACCAGACAGCAAAAGCAAAAC
TCACTGTATCTCTCTCCTGTTATCACCATCGTCATCATCTCCATTTTATC
TCCGTTATCACTTGCATCACAGCCGTCCAAATTCAGGCGGGCCCCACGCT
TCGTCGGAAAATTGTCACACCTAACTGAACCCCCCCAACGACAACAACAG
CAGCAGTACCGGTATGAGACCCGATATTTCGAGCAACGACTCGACCACTT
CAGCTTTGCTGATCTCCCGACATTCTCTCAAAGGTACCTGATCAACACCG
ATCACTGGGTGGGCCCCAACCGTCTGGGTCCCATCTTCCTCTACTGTGGC
AACGAAGGCGACATCGAGTGGTTCGCCGTTAATTCCGGCTTTGTGTGGGA
CATCGCTCCCAGGTTTGGCGCCATGCTTGTCTTTCCCGAGCATCGGTACT
ATGGTGAGTCGATGCCATATGGAAGCACAGAAGTGGCATATCAAAATGCT
ACTACATTATCATATTTGACGGCCGAGCAAGCTCTTGCTGATTTTGCTGT
CTTTATTACTAACCTGAAGCAGAATTTATCGGCTGAAGCTTCTCCCGTAG
TGTTATTTGGTGGATCATATGGTGGAATGTTAGCTGCATGGATGAGGTTA
AAGTATCCTCACATTGCAATTGGTGCGCTTGCTTCATCAGCGCCAATTCT
TCAATTTGAAGATATTGTCCCACCAGAAACATTTTACAACATTGTATCCA
GTGATTTCAAGCGTGAAAGTGCCAGCTGCTTCAACACTATAAAGGAGTCC
TGGGGTGAGTTGGTATCAGTGAGCCAAAAAGAGAATGGACTTCTTGAACT
GACTAAAACTTTCACCTATGTCGGGAGTAAATAGTACAGAGGATCTTGCA
GACTGGTTTGAATCTGCATATAGTTACTTGGCAATGGTGGAATACCATAT
CCTTCTGACCTTATGATGCTTTTGCGGGATACCAAATAAAAAAGGTCTGC
AAAAAAATTGAACATGCCTCAGATGCTACCAGCCTTCTGGAGACGCAAAT
TTTGAGGGAAATAATTGCCTATTAAAAATTAATACTGAAAAAGTTTAACT
GGCTTTTAAATTGGAATAAAGAATCCTCCCCGGCTTGGGGAAGGGGGGGG
AAAAGTGTGCGGGGGAAGGGCCCCTGGAAAAAGGTGTTTTTGCCCAAAGG
TTCCTAATAAATCCAAAAAAAAAATAAAAACAAAGGTTTTTCCCCGCGTC
ATAAAAAAAAATTTAATATATATATTTTTCCTCCCTCTTTT
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