DY262544

Overview
NameDY262544
Unique NameDY262544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1057
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262544 vs. ExPASy Swiss-Prot
Match: ATXR4_ARATH (Histone-lysine N-methyltransferase ATXR4 OS=Arabidopsis thaliana GN=ATXR4 PE=2 SV=2)

HSP 1 Score: 387.111 bits (993), Expect = 9.155e-107
Identity = 188/299 (62.88%), Postives = 228/299 (76.25%), Query Frame = 3
Query:   42 SAATHNGKPSQPSPPPIQVALTESAGRGVFATRRIGAGDLIHTAKPIITHPTLSTLNSVCYFCLRKITSSSQHFQHHNARFCSEVCKDNAKAFYDVERRADWSVFNDYCRSQGLKYPLLVKRLACMIISGAESADCIDILQPASLSPELILAMEEGFVMLRSAFKKAGIDDEQMKFLNKQWYTNVLAQIRINAFRIELAGG-LYEDLLXXXXXXXXXXXXVGNAIYMLPSFYNHDCDPNAHIMWIDNADARLMALRDVEEGEELRICYIDASMARDARQAILTQGFGFQCNCLRCSSGD 935
            SAA++     Q  PPPI+V LTESAGR VFATR+IGAGDLIHTAKP++  P+L  L+SVCY CL+K+  S++ F+     +CS+ C++N+K F DVE RADWS F+DYCR+   KYPL+VKRL CMIISGA  ADC+DILQPA LS E+I  +E+G+ +L +AF+KA   D+ + FL KQWYT +LA+IRINAFRI+L GG   EDLL            VG+A+YMLPSFYNHDCDPNAHI+W+ NADARL  LRDVEEGEELRICYIDASM  +ARQ IL+QGFGF CNCLRC S D
Sbjct:   28 SAASNRDGDYQIGPPPIRVGLTESAGRAVFATRKIGAGDLIHTAKPVVACPSLLKLDSVCYLCLKKLMGSAK-FEDRGVSYCSQECQENSKGFLDVETRADWSSFDDYCRTHNFKYPLMVKRLCCMIISGARPADCLDILQPAVLSSEMISKIEDGYGLLWNAFRKANFKDDDVAFLTKQWYTAILARIRINAFRIDLVGGSCGEDLLSLAAASVEGEGAVGHAVYMLPSFYNHDCDPNAHIIWLHNADARLNTLRDVEEGEELRICYIDASMGYEARQTILSQGFGFLCNCLRCQSTD 325          
BLAST of DY262544 vs. ExPASy Swiss-Prot
Match: Y2454_DICDI (SET and MYND domain-containing protein DDB_G0292454 OS=Dictyostelium discoideum GN=DDB_G0292454 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.946e-17
Identity = 70/280 (25.00%), Postives = 126/280 (45.00%), Query Frame = 3
Query:  156 DLIHTAKPIITHPTLSTLN-SVCYFCLRKITSSSQHFQHHNA-----RFCSEVCKDNAKA-FYDVERRADWSVFN---DYCRSQGLKYPLLVKRLACMIISGAESADCIDILQPASLSPELILAM-------------EEGFVMLRSAFKKAGIDDEQMKF-LNKQWYTNVLAQIRINAFRIELAGGLYEDLLXXXXXXXXXXXXVGNAIYMLPSFYNHDCDPNAHIMWIDNADARLMALRDVEEGEELRICYIDASMARDARQAILTQGFGFQCNCLRC 923
            +LI   +P I++P++   N ++C  CL++I    +  +         ++CS  CK+ +   ++ V  ++  S FN    +   +  ++PLL  ++   +I G         L+ +S S  L L M             ++  +  RS  K  GI++E MK   +  W+  V+  + +N   I++        +             G  +Y+L SF NHDCDPNA I + D+    L  L+ +  G+E+ I Y D +     R++ L + +GF C C +C
Sbjct:   71 NLIFKEEPFISYPSIIKSNENICNHCLKEIKKEEEEIKQECEECKVYKYCSIECKEKSSIEYHSVLCKSTGSGFNYLEKHASIEKRRFPLLAGKILARMIMGYH-------LEKSSKSTWLPLQMLSFAKKPPPLEWKDDYLIFSRSLLK--GINNESMKKKFDYDWFVRVMQILYLNTIGIDIDPNQQSTKMSSPES--------GIGLYLLTSFINHDCDPNAFIHFPDDHTMHLSPLKPINPGDEITISYTDTTKDLVDRRSQLFENYGFNCECKKC 333          
BLAST of DY262544 vs. ExPASy Swiss-Prot
Match: SMYD3_HUMAN (SET and MYND domain-containing protein 3 OS=Homo sapiens GN=SMYD3 PE=1 SV=4)

HSP 1 Score: 72.7886 bits (177), Expect = 3.822e-12
Identity = 77/294 (26.19%), Postives = 118/294 (40.14%), Query Frame = 3
Query:   81 PPPIQVALTESAGRGVFATRRIGAGDLIHTAKPIITHPTLSTLNSVCYFCLRKITSSSQHFQHHNARFCSEVCKDNAKAFYDVERRADWSVFNDYCRSQGLKYP----LLVKRLACMIISGA--ESADCIDILQPASLSPELILAMEEGF---VMLRSAFKKAGIDDEQMKFLNKQWYTNVLAQIRINAFRIELAGGLYEDLLXXXXXXXXXXXXVGNAIYMLPSFYNHDCDPNAHIMWIDNADARLMALRDVEEGEELRICYIDASMARDARQAILTQGFGFQCNCLRCSSGD 935
            P  ++   T   G G+ A   +  G+L+  + P+       +   VC  CL       +  Q   A++CS  C+   KA+ D +R           +S   +YP     L+ R+   ++ GA  ES          S   +L    +EG    VM    F +  I D          +    A++  N+F I  A                    VG  +Y   S  NH CDPN  I++ +     L A+RD+E GEEL ICY+D  M  + R+  L   + F+C+C RC + D
Sbjct:    3 PLKVEKFATAKRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQK--KAWPDHKRECKC------LKSCKPRYPPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKLTEDKKEGLRQLVMTFQHFMREEIQDASQLPPAFDLF-EAFAKVICNSFTICNA----------------EMQEVGVGLYPSISLLNHSCDPNCSIVF-NGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQD 270          
BLAST of DY262544 vs. ExPASy Swiss-Prot
Match: MSTAA_DROME (Protein msta, isoform A OS=Drosophila melanogaster GN=msta PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11
Identity = 67/283 (23.67%), Postives = 110/283 (38.87%), Query Frame = 3
Query:   84 PPIQVALTESAGRGVFATRRIGAGDLIHTAKPIITHPTLSTLN-SVCYFCLRKITSSSQHFQHHNARFCSEVCKDNAKAFYDVERRADWSVFNDYCRSQGLKYPLLVKRLACMIIS--GAESADCIDILQPASLSPELILAMEEGFVMLRSAFKKAGIDDEQMKFLNKQWYTNVLAQIRINAFRIELAGGLYEDLLXXXXXXXXXXXXVGNAIYMLPSFYNHDCDPNAHIMWIDNADARLMALRDVEEGEELRICYIDASMARDARQAILTQGFGFQCNCLRC 923
            P   ++ +  AGRGVFATR I AG+LI   + ++T PT      S C  C   +  +    +H       E C D+ +   + E    W    D    Q    P+ ++ L  + +   G E    +D +Q  +       A     +     F+     D    F+++ +   ++  +  NAF      G +E LL                ++ L +  NH+C PNA   + +   A + A RD+ +G E+   Y         R   L     F C+C+RC
Sbjct:   55 PNWTISSSTVAGRGVFATRDIAAGELIFQERALVTGPTARKGQLSSCICCHETLPQTGFLCRHRCTLPVCETCSDSEEHQAECEHFRRWQP-KDVDAEQEQVNPMSLRILTAVRVFHLGKEQRHLVDAMQANAER-----AYRREIIQAAQCFRNFPTTDRV--FMDQLF--RIVGVLNTNAFEAPCRSGGHETLL--------------RGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDCVRC 313          
BLAST of DY262544 vs. ExPASy Swiss-Prot
Match: SMYD3_MOUSE (SET and MYND domain-containing protein 3 OS=Mus musculus GN=Smyd3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.477e-11
Identity = 73/286 (25.52%), Postives = 114/286 (39.86%), Query Frame = 3
Query:  105 TESAGRGVFATRRIGAGDLIHTAKPIITHPTLSTLNSVCYFCLRKITSSSQHFQHHNARFCSEVCKDNAKAFYDVERRADWSVFNDYCRSQGLKYPLLVKRLACMII------SGAESADCIDILQPASLSPELILAMEEGFVMLRSAFK---KAGIDDEQMKFLNKQWYTNVLAQIRINAFRIELAGGLYEDLLXXXXXXXXXXXXVGNAIYMLPSFYNHDCDPNAHIMWIDNADARLMALRDVEEGEELRICYIDASMARDARQAILTQGFGFQCNCLRCSSGD 935
            T + G G+ A   +  G+L+  + P+       +   VC  CL       +  Q   A++CS  C+   KA+ D  R           +S   +YP    RL   +I        +ES          S   +L    +EG   L   F+   +  I D      +   +    A++  N+F I  A                    VG  +Y   S  NH CDPN  I++ +     L A+R++E GEEL ICY+D  M  + R+  L   + F+C+C+RC + D
Sbjct:   11 TANRGNGLRAVAPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRIAKYCSAKCQK--KAWPDHRRECSC------LKSCKPRYPPDSVRLLGRVIVKLMDEKPSESEKLYSFYDLESNISKLTEDKKEGLRQLAMTFQHFMREEIQDASQLPPSFDLF-EAFAKVICNSFTICNA----------------EMQEVGVGLYPSMSLLNHSCDPNCSIVF-NGPHLLLRAVREIEAGEELTICYLDMLMTSEERRKQLRDQYCFECDCIRCQTQD 270          
The following BLAST results are available for this feature:
BLAST of DY262544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATXR4_ARATH9.155e-10762.88Histone-lysine N-methyltransferase ATXR4 OS=Arabid... [more]
Y2454_DICDI3.946e-1725.00SET and MYND domain-containing protein DDB_G029245... [more]
SMYD3_HUMAN3.822e-1226.19SET and MYND domain-containing protein 3 OS=Homo s... [more]
MSTAA_DROME1.112e-1123.67Protein msta, isoform A OS=Drosophila melanogaster... [more]
SMYD3_MOUSE2.477e-1125.52SET and MYND domain-containing protein 3 OS=Mus mu... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100BB03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262544 ID=DY262544; Name=DY262544; organism=Citrus clementina; type=EST; length=1057bp
CCCGCCTCGAAAGTCTTCATTTAGAAAAGAGGCAGCTTTGCTCCGCCGCA
ACGCACAATGGGAAACCCAGTCAACCCTCGCCGCCGCCAATCCAAGTCGC
GCTCACCGAGTCCGCCGGTCGCGGCGTCTTCGCCACTCGGAGAATCGGGG
CCGGCGATCTCATCCACACCGCCAAGCCCATCATAACTCACCCGACTCTT
TCCACACTAAACAGCGTGTGTTACTTTTGTCTCAGAAAGATTACTTCGAG
TTCGCAGCATTTTCAACATCATAATGCTCGCTTTTGCAGTGAAGTGTGCA
AAGATAACGCTAAGGCATTTTATGATGTTGAGAGGAGAGCGGATTGGTCT
GTTTTCAATGACTATTGCCGGAGTCAAGGATTGAAATACCCTCTTCTGGT
GAAGCGGTTGGCTTGTATGATTATATCAGGAGCTGAATCTGCTGACTGTA
TTGACATACTTCAACCTGCTAGTTTATCCCCTGAATTGATTTTGGCGATG
GAAGAGGGTTTTGTTATGCTAAGGAGTGCCTTTAAAAAGGCAGGTATAGA
TGATGAACAGATGAAATTTCTAAACAAGCAATGGTACACTAATGTACTGG
CTCAAATTCGTATCAATGCGTTTCGTATTGAATTGGCTGGAGGATTGTAT
GAAGATCTTCTTTCATCAGCTGCAGCCTCCATAGAATCTGAAATTGCAGT
TGGGAATGCAATTTATATGCTTCCATCCTTCTATAACCACGATTGTGATC
CGAATGCACATATTATGTGGATAGACAATGCAGATGCAAGATTGATGGCC
CTTCGTGATGTTGAGGAAGGGGAAGAACTTCGGATATGCTACATCGATGC
AAGTATGGCTCGTGATGCTCGTCAAGCTATCTTAACGCAAGGGTTCGGTT
TTCAGTGCAACTGCTTGCGGTGTTCATCTGGTGACTGGAAAACGTTTTCT
CGTGTTTTCTTCTGGTTTTAGCACTTTGGTACCGAAACCATCTCTTGTCA
CATAACCGTAGGGTTATGATCTGGCTACATGATAAATGAAAAATCGTTAA
AAAAGGG
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