DY262693

Overview
NameDY262693
Unique NameDY262693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length934
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_PEA (Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum GN=HIS3 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.032e-59
Identity = 122/188 (64.89%), Postives = 143/188 (76.06%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVLPPS 566
            KET+  V+I   GSGVADSS  I FL  M DQ+ SHGL  V+V +TG + I DHHT +   LA+GTALLQA+ D KGIN+FGDF+ PLDEALI V+LDLSG PH  Y+L I TQR GTYDTQ+VEHF QS+ NTSGMTL IRQLAG+NSHHIIEAT+KAFA AL   T+YDP   G++PSS+ VL  S
Sbjct:   94 KETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSLDLSGRPHLSYNLDIPTQRVGTYDTQVVEHFLQSIVNTSGMTLHIRQLAGRNSHHIIEATFKAFARALRQATEYDPRRRGSVPSSKGVLSRS 281          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7A_ARATH (Imidazoleglycerol-phosphate dehydratase 1 OS=Arabidopsis thaliana GN=At3g22425 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.006e-58
Identity = 122/188 (64.89%), Postives = 143/188 (76.06%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVLPPS 566
            KET+  V+I   G+GVADSS  I FL  M DQ+ SHGL  V+V +TG + I DHHT +   LA+GTALL+A+ + KGIN+FGDFT PLDEALI V+LDLSG P+  Y+L+I TQR GTYDTQLVEHFFQSL NTSGMTL IRQLAG+NSHHIIEAT+KAFA AL   T+ DP   G IPSS+ VL  S
Sbjct:   83 KETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGENSHHIIEATFKAFARALRQATETDPRRGGTIPSSKGVLSRS 270          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7B_ARATH (Imidazoleglycerol-phosphate dehydratase 2 OS=Arabidopsis thaliana GN=At4g14910 PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.484e-57
Identity = 122/188 (64.89%), Postives = 141/188 (75.00%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVLPPS 566
            KET+  V+I   G GV+DSS  I FL  M DQ+ SHGL  V+V +TG   I DHHT +   LA+GTALL+A+ + KGIN+FGDFT PLDEALI V+LDLSG P+  Y+L+I TQR GTYDTQLVEHFFQSL NTSGMTL IRQLAGKNSHHIIEAT+KAFA AL   T+ DP   G IPSS+ VL  S
Sbjct:   85 KETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS 272          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_WHEAT (Imidazoleglycerol-phosphate dehydratase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.765e-55
Identity = 118/188 (62.77%), Postives = 135/188 (71.81%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVLPPS 566
            KET+  V+I   G+GVA+SS  I FL  M DQ+ SHGL  VYV +TG   I DHH+ +   LA+GTALLQA+ D KGIN+FG FT PLDEA + V LDLSG PH    L I T+R GTYDTQLVEHFFQSL NTSGMTL IRQLAG NSHHIIEAT+KAFA AL   T+YD    G +PSS+ VL  S
Sbjct:    8 KETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDLSGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGNNSHHIIEATFKAFARALRQATEYDLRRQGTMPSSKGVLSRS 195          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_SYNY3 (Imidazoleglycerol-phosphate dehydratase OS=Synechocystis sp. (strain PCC 6803) GN=hisB PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.083e-44
Identity = 99/185 (53.51%), Postives = 121/185 (65.41%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVL 557
            KET   V +   GSG+   +  + FL  M  Q+ SHGL+ + V +TG I I DHHT +  G+ LG AL +A+ D +GIN+FG F  PLDEAL+ VTLD SG PH  Y LQI T+R GTYDTQLV  FF ++ N S MTL IRQL G NSHHIIEAT+KAFA A+    + DP     IPSS+ VL
Sbjct:   26 KETDVRVSLNLMGSGLCHVATGVPFLDHMLHQIASHGLIDLEVNATGDIEIDDHHTNEDVGITLGQALAEALGDRRGINRFGHFIAPLDEALVQVTLDFSGRPHLSYGLQIPTERVGTYDTQLVREFFVAVVNHSQMTLHIRQLDGINSHHIIEATFKAFARAMRMAIEVDPRRADTIPSSKGVL 210          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_THEEB (Imidazoleglycerol-phosphate dehydratase OS=Thermosynechococcus elongatus (strain BP-1) GN=hisB PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.414e-44
Identity = 99/185 (53.51%), Postives = 122/185 (65.95%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVL 557
            KET   V++   G+G+AD+   I FL+ M DQ+ +HGL+ + V ++G   I DHHT +  G+ LG AL QA+ D +GI +FG F  PLDE+L+ V LD SG PH  Y LQI TQR GTYDTQLV  FF +L N S MTL IRQL G NSHHIIEAT+KAFA AL      DP     IPSS+ V+
Sbjct:   24 KETKVHVELTLDGNGLADNHTGIPFLNHMLDQLCAHGLVDLRVQASGDTHIDDHHTNEDVGITLGMALDQALGDRRGIQRFGHFVAPLDESLVEVALDFSGRPHLNYGLQIPTQRVGTYDTQLVREFFVALVNHSRMTLHIRQLDGMNSHHIIEATFKAFARALRMAIALDPRRAQQIPSSKGVI 208          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_SYNS9 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9902) GN=hisB PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.042e-43
Identity = 94/184 (51.09%), Postives = 123/184 (66.85%), Query Frame = 3
Query:    6 ETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVL 557
            ET   V++   GSG  ++S  + FL  M +Q+ SHGL+ + + + G   I DHHT +  G+A+G AL QA+ D KGI++FG F  PLDEAL+ V LD SG PH  Y L I TQ+ G+YDT+LV+ FF ++ N SG+TL IRQL G NSHHI+EA +KAFA AL   T+ DP   G IPSS+ VL
Sbjct:   12 ETDVKVKLDLDGSGCCEASTGVPFLDHMLNQISSHGLIDLTITAVGDTHIDDHHTNEDVGIAVGQALSQALGDRKGIHRFGHFVAPLDEALVQVALDCSGRPHISYGLTIPTQKIGSYDTELVKEFFVAVANNSGLTLHIRQLDGVNSHHIVEACFKAFARALRMATEIDPRRAGAIPSSKGVL 195          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_MICAN (Imidazoleglycerol-phosphate dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=hisB PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.042e-43
Identity = 102/185 (55.14%), Postives = 117/185 (63.24%), Query Frame = 3
Query:    3 KETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVL 557
            KET   V I   GSG   +   I FL  M  Q+ SH  + + V +TG I I DHHT +  G+ LG ALLQA+ D KGI +FG F  PLDEAL+ V LD SG PH  Y L+I TQR GTYDTQLV  FF +L N S MTL IRQL G NSHHIIEAT+KAFA A+      DP   G IPSS+ VL
Sbjct:   25 KETDVQVTIDLDGSGNCRAQTGIPFLDHMLQQIASHAAIDLDVRATGDIEIDDHHTNEDVGITLGQALLQALGDKKGIVRFGHFVAPLDEALVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVALVNHSQMTLHIRQLDGINSHHIIEATFKAFARAMSMAIAIDPRRAGIIPSSKGVL 209          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_SYNSC (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9605) GN=hisB PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.758e-43
Identity = 94/184 (51.09%), Postives = 121/184 (65.76%), Query Frame = 3
Query:    6 ETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVL 557
            ET   V++   GSG   +S  + FL  M  Q+ SHGL+ + + + G   I DHHT +  G+A+G AL QA+ D +GI++FG F  PLDEAL+ V LD SG PH  Y L I +QR GTYDT+LV+ FF ++ N SG+TL IRQL G NSHHI+EA +KAFA AL   T+ DP   G IPSS+ VL
Sbjct:   13 ETDVKVRLDLDGSGQCQASTGVPFLDHMLHQISSHGLIDLEINAVGDTHIDDHHTNEDVGIAVGQALAQALGDRRGIHRFGHFVAPLDEALVQVALDCSGRPHLSYSLAIPSQRIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGVNSHHIVEACFKAFARALRMATEVDPRRAGAIPSSKGVL 196          
BLAST of DY262693 vs. ExPASy Swiss-Prot
Match: HIS7_PROM3 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9303) GN=hisB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.323e-42
Identity = 93/184 (50.54%), Postives = 122/184 (66.30%), Query Frame = 3
Query:    6 ETSA*VQIIYYGSGVADSSP*IHFLHDMRDQMVSHGLL*VYVMSTGHILIVDHHTADQFGLALGTALLQAIVDMKGINQFGDFTGPLDEALILVTLDLSGLPH*YYDLQIRTQRGGTYDTQLVEHFFQSLENTSGMTLLIRQLAGKNSHHIIEATYKAFAMALPTTTDYDPLHLGNIPSSRRVL 557
            ET   V++   G G  + S  + FL  M  Q+ SHGLL + + +TG   I DHHT +  G+A+G AL QA+ D +GI++FG F  PLDEAL+ V LD SG PH  Y LQI +QR G+YD++LV+ FF ++ N SG+TL IRQLAG NSHHI+EA +KAFA AL    + DP   G +PSS+ VL
Sbjct:   18 ETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHFSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVL 201          
The following BLAST results are available for this feature:
BLAST of DY262693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_PEA2.032e-5964.89Imidazoleglycerol-phosphate dehydratase OS=Pisum s... [more]
HIS7A_ARATH5.006e-5864.89Imidazoleglycerol-phosphate dehydratase 1 OS=Arabi... [more]
HIS7B_ARATH2.484e-5764.89Imidazoleglycerol-phosphate dehydratase 2 OS=Arabi... [more]
HIS7_WHEAT6.765e-5562.77Imidazoleglycerol-phosphate dehydratase (Fragment)... [more]
HIS7_SYNY31.083e-4453.51Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_THEEB1.414e-4453.51Imidazoleglycerol-phosphate dehydratase OS=Thermos... [more]
HIS7_SYNS92.042e-4351.09Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_MICAN2.042e-4355.14Imidazoleglycerol-phosphate dehydratase OS=Microcy... [more]
HIS7_SYNSC7.758e-4351.09Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_PROM31.323e-4250.54Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CG01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262693 ID=DY262693; Name=DY262693; organism=Citrus clementina; type=EST; length=934bp
CCAAAGAAACGAGCGCGTAAGTGCAAATTATTTACTATGGTTCTGGCGTT
GCTGATTCTTCCCCTTGAATTCACTTCCTACATGACATGCGTGATCAAAT
GGTTTCACACGGACTATTATAAGTGTACGTGATGTCCACGGGACACATTC
TCATTGTTGATCATCATACTGCTGACCAGTTTGGGCTTGCCCTTGGCACC
GCATTGCTGCAAGCTATTGTTGATATGAAAGGAATTAATCAGTTTGGTGA
TTTTACAGGTCCTCTTGATGAAGCTTTAATTCTTGTTACTTTGGATTTAT
CTGGACTGCCACATTGATATTATGATTTGCAAATTCGCACACAGAGAGGT
GGAACTTACGACACTCAATTGGTGGAGCACTTTTTCCAGTCTTTGGAGAA
CACTTCCGGAATGACTCTTCTCATTCGACAGCTTGCTGGAAAAAATTCTC
ATCACATTATTGAGGCAACCTACAAAGCTTTTGCGATGGCTCTCCCAACA
ACGACAGACTATGATCCACTTCACCTTGGAAATATACCAAGCTCAAGAAG
GGTTCTACCACCATCTTGATACTTTCGGGAATCCTGGACTGGGCATGGGG
TTCTTCATGCAGCCTTTAAAATAATGTTACAAGGTTAAAAATTTCACCCC
CTCTCCTATCGTAAAATTTAAAAGGGGTTCTTTTAATTTTAGGGGGTCAC
TCTTTTATCTTACCCGGGAACGGTGCTGGTTTAATGGGTAGGGGCAAGAA
AATTTTCAATCTTTCCTTTGTGCCTTGGCCCTTTCAAAAGAATAAGTTTA
AAAGGAAAAAATATGGGAGGGGAAAAATGGCTCCCGTTCTTTTGTTGGGC
CCCCCAGAGGTAAAGAGGATTAAAACCCCCCTTTTCTTTTTTTTTAGACA
AATTTGGGGTCGGCGGAAAATTATGGGTGTTAAA
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