DY262716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: VPS91_SCHPO (Vacuolar protein sorting-associated protein 9a OS=Schizosaccharomyces pombe GN=vps901 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.385e-40 Identity = 95/254 (37.40%), Postives = 140/254 (55.12%), Query Frame = 1 Query: 142 HDFLERMRQPSAADFVKSIKSFIVSFSNNAPDPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFA------SIP------DDVKTDEQLSEKIALVQQFVRPENLDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNIDAQALSMEESEF 867 H FLE++R SA K +KSF+ F+ ++ FL + + WA S+ E+D+A EG+EK V+ +L+T +F+ IP DDV+ D LSEK+ L Q ++ ENLDIK + + LA EL++IN Y APRDK++C+LNCCKV AD F+P+LI+V ++A P L SN+ YIQR+R +L GE Y+ + ++ A SFI +D +L++ E EF Sbjct: 116 HMFLEQLRSSSAEPVAKYLKSFLSEFTKRRWTVNYQVKLIRDFLKFINEKIEQYEPWASGSQAEIDNAKEGMEKLVLNRLYTSLFSPEIAKSGIPLSSEHSDDVEEDRVLSEKMELFQ-WITEENLDIKKQKSSSKFFKLAADELRRINDYHAPRDKIICLLNCCKVIFSYLRNVV-----KEESADMFVPILIFVVLQARPAHLVSNIQYIQRFRSPEKLTGEVMYYLSTLMGAMSFIETLDCSSLTITEEEF 363
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: GAPD1_HUMAN (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 1.076e-24 Identity = 75/218 (34.40%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 190 KSIKSFIVSFSNNAPDPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFASIPD-DVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNID 834 K I+ FI F ++ +A V+ FL + A +W SEE+L A +E+ VM ++F F D D+ D+ L E I + + V + L I + E W AQ E++ I+ YK PRDK+ CIL C ++ PGAD+F+PVL++V IKANPP L S + YI + S L GE +Y++ +A FI ID Sbjct: 1263 KKIREFIQDFQKLTAADDK-TAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANE---DSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSF-YASCLSGEESYWWMQFTAAVEFIKTID 1475
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: GAPD1_BOVIN (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Bos taurus GN=GAPVD1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.076e-24 Identity = 75/218 (34.40%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 190 KSIKSFIVSFSNNAPDPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFASIPD-DVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNID 834 K I+ FI F ++ +A V+ FL + A +W SEE+L A +E+ VM ++F F D D+ D+ L E I + + V + L I + E W AQ E++ I+ YK PRDK+ CIL C ++ PGAD+F+PVL++V IKANPP L S + YI + S L GE +Y++ +A FI ID Sbjct: 1198 KKIREFIQDFQKLTAADDK-TAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLKEAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANE---DSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSF-YASCLSGEESYWWMQFTAAVEFIKTID 1410
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: GAPD1_XENLA (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Xenopus laevis GN=gapvd1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.130e-24 Identity = 72/216 (33.33%), Postives = 108/216 (50.00%), Query Frame = 1 Query: 196 IKSFIVSFSNNAPDPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFASIPD-DVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNID 834 I FI F ++ +A V+ FL ++ A +W SEE+L A +E+ +M ++F F D D+ D+ L E I + + V + L I + E W AQ E++ I+ YK PRDK+ CIL C + PGAD+F+PVL++V IKANP L S + YI + +RL+GE +Y++ +A FI ID Sbjct: 1239 IHEFIQDFQKLTAADDK-TAQVEEFLQSLYGAMAQDVIWQNASEEQLQDAQIAIERSIMNRIFKLAFNPNQDADILRDQVLHEHIKRLSKVVTANHRALQIPEVYLREAPWPSAQTEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEY---SVPGADDFVPVLVFVLIKANPTYLLSTVQYISSF-YSNRLIGEESYWWMQFTAAVEFIKTID 1449
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: GAPD1_MOUSE (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus GN=Gapvd1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 3.130e-24 Identity = 74/218 (33.94%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 190 KSIKSFIVSFSNNAPDPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFASIPD-DVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNID 834 K I+ FI F ++ +A V+ FL + +W SEE+L A +E+ VM ++F F D D+ D+ L E I + + V + L I + E W AQ E++ I+ YK PRDK+ CIL C ++ PGAD+F+PVL++V IKANPP L S + YI + S L GE +Y++ +A FI ID Sbjct: 1243 KKIREFIQDFQKLTAADDK-TAQVEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANE---DSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSF-YASCLSGEESYWWMQFTAAVEFIKTID 1455
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RABX5_BOVIN (Rab5 GDP/GTP exchange factor OS=Bos taurus GN=RABGEF1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.338e-24 Identity = 70/216 (32.41%), Postives = 114/216 (52.78%), Query Frame = 1 Query: 241 ERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFA-SIPDDVKTDEQLSEKIALVQQFVRPENLDIKASFQ-NETSWLLAQK--ELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLV-GEAAYFFTNMLSAESFISNIDAQALSMEESEFER 873 E S Q F N+ + E ++ + +EKY+MT+L+ VF DD K D + ++I + +V P+ L + + + E S ++ + ++ +++ + PRDKL CI C K P AD+FLP LIY+ +K NPP+L SN+ YI R+ SRL+ GE Y+FTN+ A +FI +DAQ+L++ + +F+R Sbjct: 177 EEQSECTQDFYQNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSK----HIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDR 384
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RABX5_MOUSE (Rab5 GDP/GTP exchange factor OS=Mus musculus GN=Rabgef1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.189e-23 Identity = 81/287 (28.22%), Postives = 141/287 (49.13%), Query Frame = 1 Query: 31 RKTSESQSPLQTYSRNTQA*ISGGGRLMENADVFLGLHDFLERMRQPSAADFVKSIKSFIVSFSNNAP-DPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFA-SIPDDVKTDEQLSEKIALVQQFVRPENLDIKASFQ-NETSWLLAQK--ELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLV-GEAAYFFTNMLSAESFISNIDAQALSMEESEFER 873 ++ E+++P + +R T +E V DFL+ + + + K K F+ + E S Q F N+ + E+++ + +EK++MT+L+ VF DD K D + ++I + +V P+ L + + + E S ++ + ++ +++ + PRDKL CI C K P AD+FLP LIY+ +K NPP+L SN+ YI R+ SRL+ GE Y+FTN+ A +FI +DAQ+L++ + +F+R Sbjct: 115 KEIQEAKAPSPSINRQTS---------IETDRVTKEFIDFLKTFHK-TGQEVYKQTKMFLEAMPYKRDLSIEEQSECTQDFYQNVAERMQTR---GKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSK----HIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDR 383
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RABX5_HUMAN (Rab5 GDP/GTP exchange factor OS=Homo sapiens GN=RABGEF1 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.553e-23 Identity = 65/187 (34.76%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 328 EELDSAGEGLEKYVMTKLFTRVFA-SIPDDVKTDEQLSEKIALVQQFVRPENLDIKASFQ-NETSWLLAQK--ELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLV-GEAAYFFTNMLSAESFISNIDAQALSMEESEFER 873 E ++ + +EKY+MT+L+ VF DD K D + ++I ++ +V P+ L + + E S ++ + ++ +++ + PRDKL CI C K P AD+FLP LIY+ +K NPP+L SN+ YI R+ SRL+ GE Y+FTN+ A +FI +DAQ+L++ + +F+R Sbjct: 419 ERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALR-WVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSK----HIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDR 600
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: VPS9_YEAST (Vacuolar protein sorting-associated protein 9 OS=Saccharomyces cerevisiae GN=VPS9 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 7.708e-23 Identity = 79/263 (30.04%), Postives = 129/263 (49.05%), Query Frame = 1 Query: 130 FLGLHDFLERMRQPSAADFVKSIKSFIVSFSNNAP--DPERDSAAVQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFAS---------IPD----DVKTDEQLSEKIALVQQFVRPENLDIKASFQN---ETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNIDAQALSMEESE 864 F F+++++ P A VK KSF+ +F + + F + F + + ++ +A EG+EK +M KL++R F+ + D D+ D+ L EKI + F+ P LDI + N LA KEL KIN +K+PRDK+VC+LN KV GAD F+PVLIY +K L SN+ YI+R+R + GE Y+ +++ +A +FI ++ ++L++++ E Sbjct: 60 FYDFQIFIKQLQTPGADPLVKYTKSFLRNFLAQRLLWTVSEEIKLISDFKTFIYDKFTLYEPFRSLDNSKMRNAKEGMEKLIMGKLYSRCFSPSLYEILQKPLDDEHMKDLTNDDTLLEKIRHYR-FISPIMLDIPDTMPNARLNKFVHLASKELGKINRFKSPRDKMVCVLNASKVIFGLLKHTKLEQN----GADSFIPVLIYCILKGQVRYLVSNVNYIERFRSPDFIRGEEEYYLSSLQAALNFIMSLTERSLTIDDHE 317
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RME6_DROME (Receptor-mediated endocytosis protein 6 homolog OS=Drosophila melanogaster GN=CG1657 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.965e-18 Identity = 61/173 (35.26%), Postives = 91/173 (52.60%), Query Frame = 1 Query: 325 EEELDSAGEGLEKYVMTKLFTRV-FASIPDDVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNID 834 E ++D+A +E+ ++ +++ +V F + DV DE LS I +Q+FV P + L I + E W AQ++L + YK PR+KL CI+NC P AD+ LPVLIYV I ANPP L S + YI + + +L GE +++T S FI +D Sbjct: 1542 EWQVDAARVAIERMLLEQMYEQVMFPNEDADVSRDEVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTFAQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSSGRV----PAADDLLPVLIYVVIMANPPYLLSTVEYISCFLGK-KLEGEDEFYWTLFGSVVKFIKTMD 1709 The following BLAST results are available for this feature:
BLAST of DY262716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262716 ID=DY262716; Name=DY262716; organism=Citrus clementina; type=EST; length=1218bpback to top |