DY262717

Overview
NameDY262717
Unique NameDY262717
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1167
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12564 contig Ccv1_Contig12564:82..1249. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 6.251e-75
Identity = 130/224 (58.04%), Postives = 159/224 (70.98%), Query Frame = 1
Query:  160 FTITNECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTC-AAADYVITFCP 822
            FT TN+C NT+WPG L+G G PQL  TGF L SG STS++V A WSGR W R+HC+ DS  KF C TGDCGSG + C+G GA+PPA+L E TL   GG DF+DVSLVDG+NLP+ + PR   G +G+C +  C A +N  CP+EL   +  +G  + CKSAC A   PQYCC+GA+ TPDTC PT +S  FKN CP+AYSYAYDD +STFTC    +Y ITFCP
Sbjct:   25 FTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPR---GGSGDCNSTSCAANINTVCPAELS-DKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.033e-69
Identity = 125/223 (56.05%), Postives = 152/223 (68.16%), Query Frame = 1
Query:  163 TITNECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAA-DYVITFCP 822
            T TN C NT+WPG L+G   PQLS TGF L S  S S+  P+ WSGR W RT C+ D+  KFTC T DCGSG + C+G GA PPATL E T+   GG D++DVSLVDG+NLPM V P+   G  G C  + C A +N  CP+ L+V +A +G  ++CKSAC AFGD +YCC+    TP+TC PT YS  F+  CP+AYSYAYDD  STFTC+   DYVITFCP
Sbjct:   28 TFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQ---GGTGECKPSSCPANVNKVCPAPLQV-KAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 5.667e-68
Identity = 123/223 (55.16%), Postives = 153/223 (68.61%), Query Frame = 1
Query:  163 TITNECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAAD-YVITFCP 822
            T TN+CS T+WPG L+G   PQLS TGF L +G S S+  P+ WSGR + RT C+ D+  KFTC T DCGSG + C+G GAAPPATL E T+   GG DF+DVSLVDG+NLPM V P+   G  G C A+ C A++N  CP+ L+V +  +G  +ACKSAC AF  P+YCC+     P+TC P  YS  FK  CP+AYSYAYDD +STFTC+    Y+ITFCP
Sbjct:   28 TFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQ---GGTGKCKASTCPADINKVCPAPLQV-KGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 3.673e-67
Identity = 128/223 (57.40%), Postives = 149/223 (66.82%), Query Frame = 1
Query:  160 FTITNECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDSKFT--CLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAADYVITFCP 822
            FT+ N C  T+W G L+G G P+L   GF L  G S  ++ PA WSGR WART C  D+     C+TGDCG   L C+G G  PP TLAEFTL G GG DF+DVSLVDGYN+ + + P   SG +G+C  AGC+++LN ACP  LKV +  N   VACKSACE F   QYCC GA   P+TC PT YS  FKNACP AYSYAYDD TSTFTC  A+Y ITFCP
Sbjct:   26 FTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG--LRCNG-GGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRP---SGGSGDCKYAGCVSDLNAACPDMLKVMDQNNV--VACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGANYEITFCP 239          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 4.797e-67
Identity = 125/222 (56.31%), Postives = 147/222 (66.22%), Query Frame = 1
Query:  163 TITNECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS-KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAA-DYVITFCP 822
            T TN C  TIWPG L+    PQL  TGF L S  S ++ V A W GR WART CT +S KFTC T DC +G + C+G GA PPA+L E  +    G+DF+DVSLVDGYNLP+ V  R   G  G+C A  C A +N  CP+EL+V +  +   +ACKSAC AF  PQYCC+GAF T  TC  T YS  FK  CP+AYSYAYDD TSTFTC+ A DYVITFCP
Sbjct:   26 TFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATR---GGTGDCKATSCRANVNAVCPAELQV-KGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 2.381e-66
Identity = 120/216 (55.56%), Postives = 149/216 (68.98%), Query Frame = 1
Query:  184 NTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAA-DYVITFCP 822
            NT+WPG L+G   PQLS T F L S  S S+  P+ WSGR W RT C+ D+  KF+C T DCGSG + C+G GA PPATL E T+   GG D++DVSLVDG+NLPM V P+   G  G C  + C A +N ACP++L+V +A +G  ++CKSAC AFGD +YCC+    TP+TC PT YS  F+  CP+AYSYAYDD  STFTC+   DYVITFCP
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQ---GGTGECKPSSCPANVNMACPAQLQV-KAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 3.438e-65
Identity = 121/220 (55.00%), Postives = 142/220 (64.55%), Query Frame = 1
Query:  172 NECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTC-AAADYVITFCP 822
            N C   +WPG L+    PQLS TGF L S  S  +  P  W+GR WART C+ D+  KF C T DC SG + C+G GA PPATLAEF +   GG DF+DVSLVDG+NLPM VTP+   G  G+C  A C A +N  CPSEL+  +  +G  VAC SAC  FG PQYCC+    TP+TC PT+YS  F NACP AYSYAYDD   TFTC    +Y ITFCP
Sbjct:   30 NNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQ---GGTGDCKTASCPANVNAVCPSELQ-KKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 4.646e-62
Identity = 116/219 (52.97%), Postives = 142/219 (64.84%), Query Frame = 1
Query:  172 NECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQD--SKFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAADYVITFCP 822
            N+C + +WPGI   AG   L+  GF L + ++ S+ +P  WSGR W R  CT D   +  C TGDCG G+L C+G G  PPATLAE TL     LDF+DVSLVDGYNL M + P   SG    C+ AGC+++LN  CP  L+V        VACKSAC AF  PQYCC+G F  P +C PT+YS  FK ACPKAYSYAYDD TS  TC+ A+Y++TFCP
Sbjct:   27 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCG-GSLSCNGAGGEPPATLAEITLGPE--LDFYDVSLVDGYNLAMSIMPVKGSG---QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCP 239          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.330e-60
Identity = 115/220 (52.27%), Postives = 136/220 (61.82%), Query Frame = 1
Query:  172 NECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGTGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAA-DYVITFCP 822
            N C  T+WP   +  G PQLS TGF L S  S  +  P  WSGR WART C+ D+  KF C T DC SG L C+G    PPATLAEFT+   GG DF+DVSLVDG+NLPM VTP+   G  G C    C A +N  CPSEL+     +G  VAC SAC  FG+PQYCC+    T + C PT+YS  F   CP AYSYA+DD    FTC+   +Y+ITFCP
Sbjct:   30 NNCPYTVWP---ASFGNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQ---GGTGTCKMGSCAANVNLVCPSELQKI-GSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of DY262717 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.311e-53
Identity = 105/222 (47.30%), Postives = 135/222 (60.81%), Query Frame = 1
Query:  166 ITNECSNTIWPGILSGAGTPQLSPTGFSLESGQSTSISVPASWSGRLWARTHCTQDSKF--TCLTGDCGSGTLECSGTGAAPPATLAEFTLN-GAGGLDFFDVSLVDGYNLPMLVTPRTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCIPTSYSMFFKNACPKAYSYAYDDGTSTFTCAAADYVITFCP 822
            + N C  ++WPG+L  AG P     GF L +G+  ++ VPA WSGR+W R  C+ DS+   +C TGDCG G L C+G   A PAT+ E TL   A  + F+DVSLVDG+N P  V+     G  G C  A C A++N  CPS L+V +   G    C+SAC A G  +YCC+G +A+P  C PT +S  FK  CP+AYSYAYDD TS   C A  Y+ITFCP
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCG-GVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAP--VSMAAVGGGVG-CGTAACGADVNVCCPSALEVRDR-EGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFCP 249          
The following BLAST results are available for this feature:
BLAST of DY262717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_PYRPY6.251e-7558.04Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1A_MALDO1.033e-6956.05Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_PRUPE5.667e-6855.16Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
PR5_ARATH3.673e-6757.40Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_CASSA4.797e-6756.31Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TP1B_MALDO2.381e-6655.56Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP_PRUAV3.438e-6555.00Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLPH_ARATH4.646e-6252.97Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLP2_PRUPE3.330e-6052.27Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLPH_ORYSJ2.311e-5347.30Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DA03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262717 ID=DY262717; Name=DY262717; organism=Citrus clementina; type=EST; length=1167bp
CTACCATCTTATTAATCAAGAGTCAAAACCAAACAAACATTTCATTTACA
CATTTCTTTCTCTCTTATTACAAATTCAATGGCGGCCCCTATTCAAATTT
CTATCGCCATAACCACCCTCTGTCTTCTCCAATTGCTTTCCGAAACATTG
TCAGCGACATTCACAATCACAAACGAGTGCAGCAATACAATATGGCCAGG
CATACTCTCAGGCGCAGGAACCCCACAACTCTCGCCCACTGGCTTCTCCT
TGGAGTCAGGCCAGTCCACTTCGATCTCTGTTCCAGCTTCTTGGTCAGGC
CGCCTTTGGGCCCGCACTCACTGTACCCAAGATTCCAAATTCACTTGCCT
GACCGGCGACTGTGGCTCCGGCACTCTCGAATGCTCCGGCACTGGCGCCG
CCCCTCCAGCCACCCTTGCTGAATTCACGTTGAACGGCGCAGGCGGCCTT
GATTTCTTCGACGTCAGCCTCGTGGACGGATATAATCTCCCCATGCTGGT
CACACCTCGAACTCAAAGCGGGACCGCTGGCAATTGTACGGCAGCTGGGT
GTATTGCTGAATTGAACAATGCGTGTCCCTCGGAGCTTAAGGTTACAGAG
GCCGGCAATGGTGAGGATGTTGCTTGCAAGAGCGCATGTGAAGCCTTTGG
TGACCCCCAGTACTGCTGCAGTGGAGCTTTCGCGACGCCGGATACTTGTA
TACCCACTTCTTATTCAATGTTCTTCAAGAATGCGTGCCCTAAAGCTTAC
AGCTACGCTTATGATGATGGCACCAGCACCTTCACCTGTGCCGCTGCCGA
TTATGTCATCACTTTCTGTCCTAGCCCCAGTACCAGTCTGAAATCGGCAA
ATGGGACACTGTCGGTGGCGGCCATATATCGGTCAGCACTCGACGCAGGA
GTCCGACTTGCTTCGGTACTGCCGTCGTCATGCTGGTGGCAGTTTGGCCG
GTTGTGGCGGCTCCATTGAACCCGCCAAGCTACTAAGCTACTCAAAAACC
AAATACCATCCCCTTGCTCCTTTGTTTTGTGCCTGCCTCTGAAAAATTGG
GCTTTTGGATTTTGCTCCCCCCTCCAGGCCACCCAACCCAGGGGTTCCTC
AAATTTTTCTAAAAGGGGCTTGTTTTCCCAAAAATTGGAGAGGCCACACC
TCCAAAAGCCCCCAAAG
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