DY262758

Overview
NameDY262758
Unique NameDY262758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262758_ssr146 microsatellite DY262758_ssr146:146..169. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLLC (Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 5.131e-50
Identity = 83/131 (63.36%), Postives = 93/131 (70.99%), Query Frame = 1
Query:  472 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFF 864
            S L+V FGEMLIDFVPTVSG+SLAE+                   RLGG SAF+GK+G DEFG+MLA ILK N V   G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL  AEL+L  +R  K F
Sbjct:    9 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQAEGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAELNLDLIRSAKVF 139          

HSP 2 Score: 64.3142 bits (155), Expect = 5.131e-50
Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 3
Query:  840 LITKAKIFHYGSISLNTKPCXXXXXXXXXXXXXXGVVLFYEPHLKLPLWPSANKARKRNSEPFGKLPNLTKISEKKISFSNPRKKI 1097
            LI  AK+FHYGSISL  +PC              G +L Y+P+L+LPLWPSA +A+K+    +    ++ K+S+ ++ F     KI
Sbjct:  132 LIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDS-ADVIKVSDVELEFLTGSNKI 216          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLHA (Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 8.718e-50
Identity = 83/131 (63.36%), Postives = 93/131 (70.99%), Query Frame = 1
Query:  472 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFF 864
            S L+V FGEMLIDFVPTVSG+SLAE+                   RLGG SAF+GK+G DEFG+MLA ILK N V   G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL  AEL+L  +R  K F
Sbjct:    9 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGRSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAELNLDLIRSAKVF 139          

HSP 2 Score: 64.3142 bits (155), Expect = 8.718e-50
Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 3
Query:  840 LITKAKIFHYGSISLNTKPCXXXXXXXXXXXXXXGVVLFYEPHLKLPLWPSANKARKRNSEPFGKLPNLTKISEKKISFSNPRKKI 1097
            LI  AK+FHYGSISL  +PC              G +L Y+P+L+LPLWPSA +A+K+    +    ++ K+S+ ++ F     KI
Sbjct:  132 LIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDS-ADVIKVSDVELEFLTGSNKI 216          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK5_ARATH (Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.028e-47
Identity = 78/131 (59.54%), Postives = 93/131 (70.99%), Query Frame = 1
Query:  472 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFF 864
            +PL+V FGEMLIDFVP  SG+SLAES                   +LGG SAFIGK G DEFG+ML +ILK+N VN  G+ FD  ARTALAFVTL+ DGEREFMFYRNPSADMLL+E+EL+   +++ K F
Sbjct:    4 TPLIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGDDEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESELNKDLIKKAKIF 134          

HSP 2 Score: 61.2326 bits (147), Expect = 1.028e-47
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:  840 LITKAKIFHYGSISLNTKPCXXXXXXXXXXXXXXGVVLFYEPHLKLPLWPSANKARKRNSEPFGKLPNLTKISEKKISF 1076
            LI KAKIFHYGSISL ++PC              GV+L Y+P+++LPLWPS   A +     + +  ++ K+S+ +++F
Sbjct:  127 LIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKSIWNE-ADIIKVSDDEVTF 204          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK_SOLTU (Fructokinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.566e-47
Identity = 82/131 (62.60%), Postives = 92/131 (70.23%), Query Frame = 1
Query:  472 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFF 864
            S L+V FGEMLIDFVPTVSG+SLAE+                   RLGG SAF+GK+G DEFG+MLA ILK N V   G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL   EL+L  +R  K F
Sbjct:   10 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLDLIRSAKVF 140          

HSP 2 Score: 56.6102 bits (135), Expect = 6.566e-47
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 3
Query:  840 LITKAKIFHYGSISLNTKPCXXXXXXXXXXXXXXGVVLFYEPHLKLPLWPSANKARK 1010
            LI  AK+FHYGSISL  +PC              G +L Y+P+L+LPLW S  +ARK
Sbjct:  133 LIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWSSEAEARK 189          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK1_ARATH (Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.894e-46
Identity = 78/129 (60.47%), Postives = 93/129 (72.09%), Query Frame = 1
Query:  478 LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFF 864
            L+V FGEMLIDFVPT SG+SLAE+                   RLGG SAF+GK+G DEFG+MLA IL++N V+  G+ FD GARTALAFVTLR+DG+REFMFYRNPSADMLL+  EL+L  +R  K F
Sbjct:    9 LIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEFGHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLLRPDELNLDLIRSAKVF 137          

HSP 2 Score: 58.9214 bits (141), Expect = 1.894e-46
Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 3
Query:  840 LITKAKIFHYGSISLNTKPCXXXXXXXXXXXXXXGVVLFYEPHLKLPLWPSANKARKRNSEPFGKLPNLTKISEKKISFSNPRKKI 1097
            LI  AK+FHYGSISL  +PC              G +L Y+P+L+ PLWPS  +A+ +    + K   + K+S+ ++ F     KI
Sbjct:  130 LIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQIMSIWDK-AEIIKVSDVELEFLTGSNKI 214          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.652e-38
Identity = 92/183 (50.27%), Postives = 109/183 (59.56%), Query Frame = 1
Query:  478 LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFFIMVL*V*IQNHVSQLTLLQQKLQRMLVWFSSMNPILSFPFGPQQTKQEKGILNL 1026
            LVV FGEMLIDFVP V+GLSLAES                   +LGGSSAF+GK G DEFG+ML +ILK+NNVN  G  FD  ARTALAFVTL+ DGEREFMFYRNPSADMLL EAELDL  +RR + F       I        +   +  +      S +P +  P  P      +GIL++
Sbjct:   18 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNAEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSAHMAAMRAAKAAGVLCSYDPNVRLPLWPSPDAAREGILSI 200          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK4_ARATH (Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.907e-38
Identity = 91/186 (48.92%), Postives = 114/186 (61.29%), Query Frame = 1
Query:  469 ESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFFIMVL*V*IQNHVSQLTLLQQKLQRMLVWFSSMNPILSFPFGPQQTKQEKGILNL 1026
            E  L+V FGEMLIDFVPTVSG+SLA++                   RLGG +AF+GK+G DEFG+MLA ILK+N V+  G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+  EL+L  +R  K F       I        L   ++ +      S +P L  P  P + + +K IL++
Sbjct:    7 EKSLIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGDDEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQKQILSI 192          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.907e-38
Identity = 95/197 (48.22%), Postives = 113/197 (57.36%), Query Frame = 1
Query:  436 GDGLPETKETRESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFFIMVL*V*IQNHVSQLTLLQQKLQRMLVWFSSMNPILSFPFGPQQTKQEKGILNL 1026
            GDG        E  LVV FGEMLIDFVP V+G+SLAES                   +LGGSSAF+GK G DEFG+ML DILK+N VN  G  FD  ARTALAFVTL+S+GEREFMFYRNPSADMLL EAEL+L  +RR K F       I        +   +  +      S +P +  P  P +     GIL++
Sbjct:    5 GDGAAAAAAA-EPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSI 200          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 5.907e-38
Identity = 95/197 (48.22%), Postives = 113/197 (57.36%), Query Frame = 1
Query:  436 GDGLPETKETRESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFFIMVL*V*IQNHVSQLTLLQQKLQRMLVWFSSMNPILSFPFGPQQTKQEKGILNL 1026
            GDG        E  LVV FGEMLIDFVP V+G+SLAES                   +LGGSSAF+GK G DEFG+ML DILK+N VN  G  FD  ARTALAFVTL+S+GEREFMFYRNPSADMLL EAEL+L  +RR K F       I        +   +  +      S +P +  P  P +     GIL++
Sbjct:    5 GDGAAAAAAA-EPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSI 200          
BLAST of DY262758 vs. ExPASy Swiss-Prot
Match: SCRK3_ARATH (Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.114e-36
Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  463 TRESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS*LRRQKFF 864
            T E  L+V FGEMLIDFVPTVSG+SL+ES                   RLGG +AF+GK+G D+FG+MLA IL++N V+  G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+  EL+L  +R  K F
Sbjct:    5 TGEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVF 138          
The following BLAST results are available for this feature:
BLAST of DY262758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
SCRK2_SOLLC5.131e-5063.36Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=... [more]
SCRK2_SOLHA8.718e-5063.36Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=... [more]
SCRK5_ARATH1.028e-4759.54Putative fructokinase-5 OS=Arabidopsis thaliana GN... [more]
SCRK_SOLTU6.566e-4762.60Fructokinase OS=Solanum tuberosum PE=2 SV=1[more]
SCRK1_ARATH1.894e-4660.47Probable fructokinase-1 OS=Arabidopsis thaliana GN... [more]
SCRK2_MAIZE2.652e-3850.27Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK4_ARATH5.907e-3848.92Probable fructokinase-4 OS=Arabidopsis thaliana GN... [more]
SCRK2_ORYSJ5.907e-3848.22Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI5.907e-3848.22Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK3_ARATH1.114e-3660.45Probable fructokinase-3 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DE01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262758 ID=DY262758; Name=DY262758; organism=Citrus clementina; type=EST; length=1140bp
CAACACCCAAAGGCCAAAGCGGCAGACAATAAACTAGTTTCACTTCTCTT
AGCTTTCTCCGTTACTTTCTCAAAGCTGTCCCCACTCTTCTTGCCATTTA
TCCAACACTCACAAAACGCTGACACTAGACTAAACTACATAACATCACCA
CCACCACCACCACCACCACCAATCCACTCTAATGCTATTGCCAGCAGAAA
TCCCCACTATTTTATCCGTACATCAATCTTAACGCCTGATCAAATTTCAA
AAACCTTCATCAACCACCAATTAACTCAACGACTAGCTCTTGCTATGGCT
CTTCATTCTACTGCATTTTGCTTCACTGGTGCTGTTTCTTCTTACTCTCA
CTCTTCAGTTAAGCTCGGTACTCACCCAACGATCAAAGCTTCATCTCCGC
TTCCTCGGTTGAATGTTCGAGTGAAAGCACTTCCAGGTGATGGGTTACCT
GAAACAAAGGAAACAAGGGAATCTCCGCTCGTGGTTTGTTTTGGGGAAAT
GCTGATTGATTTTGTTCCAACTGTTAGTGGACTTTCATTGGCTGAGTCGC
CAGCTTTCAAGAAAGCTCCCGGCGGTGCACCTGCTAATGTGGCTGTTGGC
ATCGCTCGCCTTGGAGGCTCATCCGCTTTTATTGGGAAGGTTGGTGCAGA
TGAATTTGGTTACATGCTTGCTGATATATTGAAGGAGAACAATGTGAATG
GTGCTGGGATGCGCTTTGACCCTGGTGCACGTACGGCTTTAGCATTTGTT
ACACTAAGGAGTGATGGGGAACGCGAGTTCATGTTTTACCGTAATCCTAG
TGCTGATATGTTGCTTCAAGAAGCTGAACTTGATCTCAGTTAATTACGAA
GGCAAAAATTTTTCATTATGGTTCTATAAGTCTAAATACAAAACCATGTA
AGTCAGCTCACATTGCTGCAGCAAAAGCTGCAAAGGATGCTGGTGTGGTT
CTCTTCTATGAACCCCATCTTAAGCTTCCCCTTTGGCCCTCAGCAAACAA
AGCAAGAAAAAGGAATTCTGAACCTTTTGGGAAACTGCCTAACTTAACCA
AAATTAGTGAAAAAAAGATTTCTTTTTCCAACCCAAGGAAAAAAATCCAA
ATAAGAATGCCGTTGTTTAAAAACTTATTTCCGGGCAAAT
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