DY262828

Overview
NameDY262828
Unique NameDY262828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1343
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_AQUAE (Aspartate-semialdehyde dehydrogenase OS=Aquifex aeolicus GN=asd PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.423e-35
Identity = 81/163 (49.69%), Postives = 112/163 (68.71%), Query Frame = 2
Query:  293 FLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELT-EDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTR 778
            FL VL +R+FP   + + AS+RS GK L+F+ K YTV+ L  E+SF G+DIALFSAGGS SK++ P   + G +V+DNSSA+RM  +VPLV+PEVNPE +   K    K  +IANPNCSTI  ++A  P++ +A + R+VVSTYQ         +E+L+ QT+
Sbjct:   18 FLKVLEERNFPVDELVLYASERSEGKVLTFKGKEYTVKALNKENSFKGIDIALFSAGGSTSKEWAPKFAKDGVVVIDNSSAWRMDPDVPLVVPEVNPEDVKDFK----KKGIIANPNCSTIQMVVALKPIYDKAGIKRVVVSTYQAVSGAGAKAIEDLKNQTK 176          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_BACSU (Aspartate-semialdehyde dehydrogenase OS=Bacillus subtilis GN=asd PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.217e-32
Identity = 73/166 (43.98%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 784
            Q+ L  L DR+F   ++ +L+SKRSAG +++F+ +  TV+E + +SF+GV+IALFSAGGS+S+   P AV++G+IV+DN+SAFRM EN PLV+PEVN   +           +IANPNCSTI  + A  P+ +   + +++VSTYQ         ++EL  QT+ +
Sbjct:   18 QQMLKTLEDRNFEMDTLTLLSSKRSAGTKVTFKGQELTVQEASPESFEGVNIALFSAGGSVSQALAPEAVKRGAIVIDNTSAFRMDENTPLVVPEVNEADLH------EHNGIIANPNCSTIQMVAALEPIRKAYGLNKVIVSTYQAVSGAGNEAVKELYSQTQAI 177          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_CAMJE (Aspartate-semialdehyde dehydrogenase OS=Campylobacter jejuni GN=asd PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.590e-32
Identity = 77/161 (47.83%), Postives = 105/161 (65.22%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSF--DGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEEL 763
            +E L+VL + DFP  SI  LAS +S G ++ F+ KAY V+ELTE+ F  + +DIA FSAGGS+S+K+   AVE G++V+DN+S FRM ++VPLV+PE NPE +   K    K  +IANPNCSTI  +    PL+    + R+ VSTYQ         M+EL
Sbjct:   18 EELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHFRMEKDVPLVVPECNPEDIKDWK----KTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTYQAASGAGKEGMQEL 174          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_STRMU (Aspartate-semialdehyde dehydrogenase OS=Streptococcus mutans GN=asd PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 3.916e-31
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 2
Query:  305 LSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 784
            L     P   +++L+S RSAGK L ++D+  TVE  T+DSF+GVDIALFSAGGS+S KF P AV+ G++VVDN+S FR   +VPLV+PEVN  AM           +IA PNCSTI  ++A  P+ ++  ++R++VSTYQ         + E   + +EV
Sbjct:   22 LEQSTLPVDKVRLLSSSRSAGKVLQYKDQDVTVELTTKDSFEGVDIALFSAGGSVSAKFAPYAVKAGAVVVDNTSHFRQNPDVPLVVPEVNAYAMD------AHNGIIACPNCSTIQMMVALEPIRQKWGLSRVIVSTYQAVSGAGQSAINETVREIKEV 175          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_PROMA (Aspartate-semialdehyde dehydrogenase OS=Prochlorococcus marinus GN=asd PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 9.646e-30
Identity = 70/165 (42.42%), Postives = 107/165 (64.85%), Query Frame = 2
Query:  290 EFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 784
            E L +L +R FP R +++LAS+RSAG+   F+ +   V++++ + F+ VD+ L SAGGSIS+K+  +    G+++VDNS+A+RM  +VPLV+PEVNP      +V   KG LIANPNC+TI+  +   PL  +  + R+VVSTYQ         M EL+  +++V
Sbjct:   26 EILKILEERSFPIRELRLLASERSAGQVQFFKGEDLVVKKVSPEGFEDVDLVLASAGGSISRKWRKVINSAGAVIVDNSNAYRMEPDVPLVVPEVNPS-----QVFTHKG-LIANPNCTTILLALVLAPLSAQLPIKRVVVSTYQSASGAGARAMNELKQLSQDV 184          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_VIBCH (Aspartate-semialdehyde dehydrogenase OS=Vibrio cholerae GN=asd PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.067e-28
Identity = 70/166 (42.17%), Postives = 101/166 (60.84%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 784
            +  L VL +R+FP   + +LAS+RS GK   F  K   V+ + E  +  V IALFSAGG +S K+ PIA E G +V+DN+S FR   ++PLV+PEVNPEA++  +       +IANPNCSTI  L+A  P++    + R+ V+TYQ         ++EL  QT ++
Sbjct:   18 ETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFR----NRNIIANPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKL 179          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_LEGPN (Aspartate-semialdehyde dehydrogenase OS=Legionella pneumophila GN=asd PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.053e-28
Identity = 68/166 (40.96%), Postives = 103/166 (62.05%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 784
            + FL+VL +R+FP +S+  LAS RS GK ++F+D+   V +L E  F  VD+ALFSAGG++SK++ P AV  G +VVDN+S FR  +++PLV+    P + S       K  +IANPNCSTI  ++A  P++    ++R+ V+TYQ         + EL  Q  ++
Sbjct:   18 ETFLTVLEERNFPIKSLYPLASSRSVGKTVTFRDQELDVLDLAEFDFSKVDLALFSAGGAVSKEYAPKAVAAGCVVVDNTSCFRYEDDIPLVV----PGSESSSNRDYTKRGIIANPNCSTIQMVVALKPIYDAVGISRINVATYQSVSGTGKKAISELVAQVGDL 179          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_VIBMI (Aspartate-semialdehyde dehydrogenase (Fragment) OS=Vibrio mimicus GN=asd PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.540e-27
Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 784
            +  L VL +R+FP   + +LAS+RS GK   F  K   V+ + E  +  V IALFSAGG +S  + PI  E G +V+DN+S FR   ++PLVIPEVNPEA++  +       +IANPNCSTI  L+A  P++    + R+ V+TYQ         ++EL  QT ++
Sbjct:   18 ETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAHWAPIRAEAGVVVIDNTSHFRYDYDIPLVIPEVNPEAIAEFR----NRNIIANPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKL 179          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_SHEVI (Aspartate-semialdehyde dehydrogenase OS=Shewanella violacea GN=asd PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.982e-27
Identity = 63/146 (43.15%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQ 724
            Q  + +L +R+FP   +  LAS RSAG  +SF  K   + ++ +  +    I  FSAGG +S+K+ PIA E G +V+DN+S FR   +VPLVIPEVNPEA++  +       +IANPNCSTI  L+A  P++    ++R+ V+TYQ
Sbjct:   18 QTMIEILEERNFPVAKLFPLASSRSAGGTVSFNGKQVEILDVDDFDWSQAQIGFFSAGGDVSEKWAPIAAENGCVVIDNTSQFRYDNDVPLVIPEVNPEAIADFR----NRNIIANPNCSTIQMLVALKPIYDAFGISRINVATYQ 159          
BLAST of DY262828 vs. ExPASy Swiss-Prot
Match: DHAS_SHESP (Aspartate-semialdehyde dehydrogenase OS=Shewanella sp. (strain DB6705) GN=asd PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.304e-26
Identity = 63/146 (43.15%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  287 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQ 724
            Q  + +L +R+FP   +  LAS RSAG  +SF  K   + ++ +  +    I  FSAGG +S+K+ PIA E G +V+DN+S FR   +VPLVIPEVNPEA++  +       +IANPNCSTI  L+A  P++    ++R+ V+TYQ
Sbjct:   18 QTIIEILQERNFPIAKLFPLASSRSAGGTVSFNGKQVEILDVDDFDWSQAQIGFFSAGGDVSEKWAPIAAESGCVVIDNTSHFRYDNDVPLVIPEVNPEAIADFR----NRNIIANPNCSTIQMLVALKPIYDAFGISRINVATYQ 159          
The following BLAST results are available for this feature:
BLAST of DY262828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
DHAS_AQUAE3.423e-3549.69Aspartate-semialdehyde dehydrogenase OS=Aquifex ae... [more]
DHAS_BACSU1.217e-3243.98Aspartate-semialdehyde dehydrogenase OS=Bacillus s... [more]
DHAS_CAMJE1.590e-3247.83Aspartate-semialdehyde dehydrogenase OS=Campylobac... [more]
DHAS_STRMU3.916e-3145.63Aspartate-semialdehyde dehydrogenase OS=Streptococ... [more]
DHAS_PROMA9.646e-3042.42Aspartate-semialdehyde dehydrogenase OS=Prochloroc... [more]
DHAS_VIBCH1.067e-2842.17Aspartate-semialdehyde dehydrogenase OS=Vibrio cho... [more]
DHAS_LEGPN4.053e-2840.96Aspartate-semialdehyde dehydrogenase OS=Legionella... [more]
DHAS_VIBMI1.540e-2741.57Aspartate-semialdehyde dehydrogenase (Fragment) OS... [more]
DHAS_SHEVI9.982e-2743.15Aspartate-semialdehyde dehydrogenase OS=Shewanella... [more]
DHAS_SHESP1.304e-2643.15Aspartate-semialdehyde dehydrogenase OS=Shewanella... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AC07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262828 ID=DY262828; Name=DY262828; organism=Citrus clementina; type=EST; length=1343bp
TTAAGATTACGTTACAAATAACTCCGATTCAGACCCCACAGACGATCTTT
GAAGCAACCAAAAACCCGATATCTGTTTCCAACTATCAAACTCAAAACCT
CACTAGCCGCCATCCGCCGCCGCAGCAAACATGGCGACTTTCTCGTCACA
TCAAACACAGACCCACTTCATATCCAAACTGCCCGCCAACAAACCCAGAA
CCAAACCCATGTTCACAAGAGTCCGAATGTCCTACCAAGAATCGGCACCC
TCCGTGGCGGTCGTCGGCGTGACTGGCGCCGTCGGCCAAGAGTTCCTCTC
CGTCCTCTCCGATCGCGACTTCCCTTACCGTTCGATCAAAATGCTGGCCT
CCAAGCGTTCTGCTGGGAAGCAACTCAGCTTCCAAGACAAAGCGTACACG
GTCGAAGAGCTAACGGAGGATAGCTTTGATGGCGTTGATATCGCGCTGTT
TAGTGCTGGTGGGTCGATCAGTAAGAAGTTTGGGCCTATTGCTGTCGAGA
AAGGGAGCATTGTTGTGGATAATAGCTCGGCTTTTAGGATGGTGGAGAAT
GTGCCGCTTGTGATTCCTGAAGTGAATCCTGAAGCCATGAGTGGGATTAA
AGTTGGAATGGGGAAAGGTGCTTTGATTGCTAATCCTAATTGTTCTACTA
TCATTTGCTTGATGGCTGCCACGCCTCTCCATCGCCGTGCTAAGGTTACA
CGTATGGTGGTAAGTACATATCAGGCTGCTAGTGGTGCTGGTGCTGCTGC
AATGGAAGAACTTGAGCTGCAAACTCGTGAGGTTTCTATAATCTATCGCC
TCCTCATTAACTTATTGCATATAATTTGCAGGTAGTTGACAATTATATTT
TATTTTTATCTGTTATAAGTTACTTTTCATTTTTTTTTTATTTTTTAAGG
TGCTGGAGAGAAAACCTCAACTTGTAAAATCTTTCACACAGGTACTATTA
CCCTGCATCCAACACCCCTAAAACCTGGAAGTTTTCTGAAGTAACCTTTG
GAAATTTTCCACTTTTGCAGTATGCTTTCAAATTTGTTCTCCAAAATGGC
ACCTGTTCCTGGAAAAGGGTAAAAGGAAAAAAAAAGAAAAATGGAAAAAA
GAAAAAAAAAAATCTGAAAAGAAAAGGAAGTTTAGAGGGACGGCCCAAAG
GCAAAACAATTTTCCGGCTGGCGGGGCCCAAGGCTGAAAAAGGGGAAACC
CTTTATTGTTAAAAAACCCCCCTTGTGAGAAGAAAACAACAAAGGGGGGA
AATTTTCAAAAAAAAAGAGCAACCCTCGGGGGGGAAAATGTTTTTTTTGG
TTTGAAAATTGGGGGGGGGCGGCTCAACAATCTCCTTTTTTTT
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