DY262854 | Citrus Genome Database

Overview


Name	DY262854
Unique Name	DY262854
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1195

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1)

HSP 1 Score: 590.882 bits (1522), Expect = 4.977e-168
Identity = 281/334 (84.13%), Postives = 303/334 (90.72%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYT-KFEHFGLLTKCYQCPPP 1000
            L FNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL+MTTYTAWYLTIA++LHGQVEGVKH+GP K++LYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYV+TLT+PSA AVYWAFGDMLLNHSNAF+LLP+SPFRDMAVILMLIHQFITFGFACTPLYFVWEK +GMHECKSLCKRA  RLPVVIPIWFLAI+FPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKS++AR+NAVEQPPKFVGRWVGT+ IN                 G A ++++  + + FGL TKCYQCPPP
Sbjct:  135 LGFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLTIAAVLHGQVEGVKHSGPNKIILYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTIPSATAVYWAFGDMLLNHSNAFALLPKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKTVGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTFVINVFIVVWVLIVGFGFG--GWASMVNFVHQIDTFGLFTKCYQCPPP 466

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1)

HSP 1 Score: 585.874 bits (1509), Expect = 1.601e-166
Identity = 284/363 (78.24%), Postives = 311/363 (85.67%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYT-KFEHFGLLTKCYQCPPPPRIXXXXXXXXXXXXXXXXXXNPTFNHFH 1087
            LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIAS+LHGQVEGVKH+GP+KLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK+IYL ATLYV+TLTLPSA+AVYWAFGD+LLNHSNAF+LLP++ +RD AV+LMLIHQFITFGFACTPLYFVWEK IGMHEC+S+CKRAAARLPVVIPIWFLAI+FPFFGPINSTVGSLLVSFTVYIIPALAHIFTF+S+AARENAVEQPP+F+GRW G +TIN                 G A +I++  + + FGL TKCYQCPPP  +                  +P FNH H
Sbjct:  133 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASILHGQVEGVKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLFATLYVLTLTLPSASAVYWAFGDLLLNHSNAFALLPKNLYRDFAVVLMLIHQFITFGFACTPLYFVWEKLIGMHECRSMCKRAAARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFRSSAARENAVEQPPRFLGRWTGAFTINAFIVVWVFIVGFGFG--GWASMINFVHQIDTFGLFTKCYQCPPPVMV------------SPPPISHPHFNHTH 481

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1)

HSP 1 Score: 546.584 bits (1407), Expect = 1.076e-154
Identity = 266/333 (79.88%), Postives = 288/333 (86.49%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYT-KFEHFGLLTKCYQCPP 997
            L FNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL+MTTYTAWY+TIAS+LHGQ E VKH+GPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYVMTLTLPSAAAVYWAFGD LL HSNA SLLPR+ FRD AVILMLIHQFITFGFACTPLYFVWEK +G+HE KSL KRA  RLPVVIPIWFLAI+FPFFGPINSTVGSLLVSFTVYIIPALAH+ TF SA ARENAVE+PP F+G WVG Y++N                 G A ++++  + + FGL  KC+QCPP
Sbjct:  132 LFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYMTIASILHGQAEDVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVMTLTLPSAAAVYWAFGDNLLTHSNALSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFLGVHETKSLLKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSFLGGWVGLYSVNVFVAVWVLVVGFGLG--GWASMLNFVHQIKTFGLFAKCFQCPP 462

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX3_ORYSJ (Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1)

HSP 1 Score: 544.273 bits (1401), Expect = 5.343e-154
Identity = 259/338 (76.63%), Postives = 285/338 (84.32%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTKFEH----FGLLTKCYQCPPPP 1003
            LAFNCTFLLFGSVIQLI CASNIYYIND+LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWY+ +ASL+HGQVEGV H+GPT +VLYFTGATNILYTFGGHAVTVEIMHAMW+PQKFKAIYLLAT+YV+TLTLPSA+A YWAFGD LL HSNA +LLPR+P+RD AV+LMLIHQFITFGFACTPLYFVWEK +G+H C SLCKRAAARLPVV+PIWFLAI+FPFFGPINS VGSLLVSFTVYIIP+LA++ TF+S  +R+NAVE+PP+F G W G Y IN                 G     S T F H    FGL  KCYQCPP P
Sbjct:  154 LAFNCTFLLFGSVIQLIGCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYIAVASLIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLLATVYVLTLTLPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFACTPLYFVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPSLAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVIN-----SFVVAWVLVVGFGFGGWASITNFVHQVDTFGLFAKCYQCPPHP 486

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1)

HSP 1 Score: 541.962 bits (1395), Expect = 2.651e-153
Identity = 261/335 (77.91%), Postives = 284/335 (84.78%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTK-FEHFGLLTKCYQCPPPP 1003
            LAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWYLTIAS LHGQ EGV H+GPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKP+KFK+IYL+ATLYV TLTLPSA+AVYWAFGD LLNHSNAFSLLP++ FRD AVILMLIHQFITFGFACTPLYFVWEKAIGMH  KSLC RA  RLPVV+PIWFLAI+FPFFGPINS VG+LLV+FTVYIIPALAH+ T+++A+AR NA E+PP F+  W G Y IN                 G A + ++ +  + FGL  KCYQC PPP
Sbjct:  145 LAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASFLHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPRKFKSIYLMATLYVFTLTLPSASAVYWAFGDQLLNHSNAFSLLPKTRFRDTAVILMLIHQFITFGFACTPLYFVWEKAIGMHHTKSLCLRALVRLPVVVPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPALAHMLTYRTASARRNAAEKPPFFIPSWAGVYVINAFIVVWVLVLGFGFG--GWASMTNFIRQIDTFGLFAKCYQCKPPP 477

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1)

HSP 1 Score: 539.265 bits (1388), Expect = 1.719e-152
Identity = 262/333 (78.68%), Postives = 285/333 (85.59%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTK-FEHFGLLTKCYQCPP 997
            L FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYT+WYLTIASLLHGQ E VKH+GPT +VLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLAT+YV+TLTLPSA+AVYWAFGD LL HSNA SLLP++ FRD AVILMLIHQFITFGFA TPLYFVWEK IG+HE KS+ KRA ARLPVV+PIWFLAI+FPFFGPINS VGSLLVSFTVYIIPALAH+ TF  A +RENAVE+PP+ VG W+GTY IN                 G A ++++ +  + FGL TKCYQCPP
Sbjct:  137 LIFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTSWYLTIASLLHGQAEDVKHSGPTTMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATIYVLTLTLPSASAVYWAFGDKLLTHSNALSLLPKTGFRDTAVILMLIHQFITFGFASTPLYFVWEKLIGVHETKSMFKRAMARLPVVVPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTFAPAPSRENAVERPPRVVGGWMGTYCINIFVVVWVFVVGFGFG--GWASMVNFVRQIDTFGLFTKCYQCPP 467

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1)

HSP 1 Score: 532.332 bits (1370), Expect = 2.101e-150
Identity = 255/333 (76.58%), Postives = 284/333 (85.29%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTK-FEHFGLLTKCYQCPP 997
            LAFNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWYL IAS++HGQ EGVKH+GPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYV TLT+PSAAAVYWAFGD LL+HSNAFSL+P++ +RD AVILMLIHQFITFGFACTPLYFVWEK IGMH+ KS+C RA ARLPVVIPIWFLAI+FPFFGPINS VG+LLVSFTVYIIP+LAH+ T++SA+AR+NA E+PP F+  W   Y +N                 G A + ++ +  + FGL  KCYQC P
Sbjct:  139 LAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASIIHGQAEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSAAAVYWAFGDALLDHSNAFSLMPKNAWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPFFMPSWTAMYVLNAFVVVWVLIVGFGFG--GWASVTNFVRQVDTFGLFAKCYQCKP 469

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1)

HSP 1 Score: 526.554 bits (1355), Expect = 1.153e-148
Identity = 252/334 (75.45%), Postives = 281/334 (84.13%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTK-FEHFGLLTKCYQCPPP 1000
            LAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWY+ IA++++GQ+E V H+GPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IY LATLYV TLT+PSA AVYWAFGD LLNHSNAFSLLP++ FRD AVILMLIHQFITFGFACTPLYFVWEK IGMH+ KS+C RA  RLPVVIPIWFLAI+FPFFGPINS VG+LLV+FTVYIIPALAH+ T+++A+AR+NAVE+PP F+  W   Y +N                 G A + ++ +  + FGL  KCYQC PP
Sbjct:  139 LAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMAIAAIVNGQIENVVHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYFLATLYVFTLTIPSAVAVYWAFGDELLNHSNAFSLLPKNGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALVRLPVVIPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPALAHMLTYRTASARKNAVEKPPSFLPSWTAVYVLNAFIVVWVLVVGFGFG--GWASMTNFIRQIDTFGLFAKCYQCKPP 470

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1)

HSP 1 Score: 526.554 bits (1355), Expect = 1.153e-148
Identity = 254/335 (75.82%), Postives = 279/335 (83.28%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTK-FEHFGLLTKCYQCPPPP 1003
            LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWYLTIAS++HGQ E V H GP KLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYV TLT+PSA AVYWAFGD LLNHSNAFSLLP++ +RD AVILMLIHQFITFGFACTPLYFVWEK IGMH+ +S+C RA ARLPVVIPIWFLAI+FPFFGPINS VG+LLVSFTVYIIP+ AH+ T++ A+AR+NA E+PP F+  W   Y  N                 G A + ++ +  + FGL  KCYQC PPP
Sbjct:  139 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQAENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSATAVYWAFGDELLNHSNAFSLLPKNGWRDGAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSAAHMLTYRKASARKNAAEKPPFFMPSWTAMYIFNAFIVIWVLVVGFGFG--GWASMTNFIRQIDTFGLFAKCYQCKPPP 471

[Close]

BLAST of DY262854 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2)

HSP 1 Score: 526.168 bits (1354), Expect = 1.506e-148
Identity = 253/334 (75.75%), Postives = 281/334 (84.13%), Query Frame = 2

Query:    2 LAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASLLHGQVEGVKHAGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKFVGRWVGTYTINXXXXXXXXXXXXXXXAVGRA*IISYTK-FEHFGLLTKCYQCPPP 1000
            LAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWYL IA+LL+GQ EG+ H GPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKP KFK IYLLATLYV TLTLPSA+A+YWAFGD LL HSNAFSLLP++ +RD AVILMLIHQFITFGFACTPLYFVWEK IGMH+ KS+C RA ARLP+V+PIWFLAI+FPFFGPINS VG+LLVSFTVYIIPALAHI T+++A+AR NA E+PP F+  W G + +N                 G A ++++ +  + FGL  KCYQCP P
Sbjct:  147 LAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFGDELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAEKPPFFLPSWTGMFVLNMFIVVWVLVVGFGLG--GWASMVNFIRQIDTFGLFAKCYQCPKP 478

The following BLAST results are available for this feature:

BLAST of DY262854 vs. ExPASy Swiss-Prot

BLAST of DY262854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13


Match Name	E-value	Identity	Description
LAX5_MEDTR	4.977e-168	84.13	Auxin transporter-like protein 5 OS=Medicago trunc...	[more]
LAX2_ARATH	1.601e-166	78.24	Auxin transporter-like protein 2 OS=Arabidopsis th...	[more]
LAX3_MEDTR	1.076e-154	79.88	Auxin transporter-like protein 3 OS=Medicago trunc...	[more]
LAX3_ORYSJ	5.343e-154	76.63	Auxin transporter-like protein 3 OS=Oryza sativa s...	[more]
LAX1_ARATH	2.651e-153	77.91	Auxin transporter-like protein 1 OS=Arabidopsis th...	[more]
LAX3_ARATH	1.719e-152	78.68	Auxin transporter-like protein 3 OS=Arabidopsis th...	[more]
AUX1_ARATH	2.101e-150	76.58	Auxin transporter protein 1 OS=Arabidopsis thalian...	[more]
LAX4_MEDTR	1.153e-148	75.45	Auxin transporter-like protein 4 OS=Medicago trunc...	[more]
LAX2_MEDTR	1.153e-148	75.82	Auxin transporter-like protein 2 OS=Medicago trunc...	[more]
LAX1_ORYSJ	1.506e-148	75.75	Auxin transporter-like protein 1 OS=Oryza sativa s...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA10AE12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262854 ID=DY262854; Name=DY262854; organism=Citrus clementina; type=EST; length=1195bp
TTTGGCTTTTAATTGTACTTTTCTTCTGTTTGGATCTGTCATTCAACTCA
TAGCTTGTGCAAGCAACATATATTACATAAATGATAATCTGGACAAGAGA
ACTTGGACTTATATATTCGGGGCTTGTTGTGCCACCACGGTGTTTATTCC
TTCATTTCACAACTACAGAATCTGGTCTTTTCTTGGCCTCCTGATGACTA
CATACACTGCTTGGTACCTCACCATTGCCTCTCTCCTCCATGGCCAGGTG
GAAGGAGTTAAGCATGCAGGTCCTACCAAGTTGGTGCTATATTTTACAGG
AGCTACAAACATTCTCTACACGTTTGGCGGACATGCTGTCACTGTGGAGA
TTATGCACGCAATGTGGAAGCCTCAGAAATTCAAGGCCATATACTTACTG
GCTACCCTGTATGTGATGACGCTAACACTTCCATCTGCAGCTGCTGTGTA
TTGGGCATTTGGAGACATGCTTCTCAATCACTCAAATGCCTTTTCTCTTC
TCCCAAGATCCCCCTTCAGAGACATGGCTGTCATTTTAATGCTTATTCAC
CAGTTTATTACATTTGGTTTTGCATGTACACCATTGTATTTTGTTTGGGA
GAAAGCAATTGGGATGCATGAATGCAAGAGCTTGTGCAAAAGAGCAGCAG
CAAGATTGCCTGTGGTGATCCCCATTTGGTTTTTGGCTATAGTCTTTCCA
TTCTTTGGCCCCATCAACTCAACCGTTGGATCACTTCTTGTCAGCTTTAC
TGTCTACATCATCCCTGCTCTTGCCCACATCTTCACTTTCAAATCAGCTG
CTGCAAGAGAGAATGCTGTGGAGCAACCACCAAAGTTTGTGGGAAGATGG
GTAGGGACGTACACGATCAATGTGTTTGTAGTAATGTGGGTGCTTGTTGT
TGGGGTTTGGATTTGGGCGGTGGGGCGAGCATGAATAATTTCATACACCA
AATTTGAACATTTTGGGCTCCTTACTAAATGCTACCAATGCCCACCACCC
CCAAGGATTTCGCCCGCCACCACCGCATTCTTTTAAACCACCGGGGCCCC
TTCCCCCCCCCCCAACCCAACTTTCAATCACTTTCATCAAAACCTTTGAT
TTGGCCCTCCCAGGGCACCAAACTTTTTCATTTAAATTATCAAAATGTTC
CCCCCCCCCCCGGGTTTTCAAATTAAAAGGCTACCCCGGTAAAGG