DY262864

Overview
NameDY262864
Unique NameDY262864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1241
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: RCC2_HUMAN (Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 2.348e-35
Identity = 90/254 (35.43%), Postives = 137/254 (53.94%), Query Frame = 1
Query:  256 LLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------TRAKAALAGRNNV--KVACGTKHTVAVDPKAKFTPGGF 957
            LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +TE G+  AFG NK GQLG G+ + +  PSP + + +   +T  ACGA+F++ +      ++ + G P+YGQLGH +D ++  +   ++   E  PR        T+    L   N V   VACG  HT+ +D + +    GF
Sbjct:  106 LLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 356          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: RCC2_MOUSE (Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.232e-35
Identity = 91/254 (35.83%), Postives = 139/254 (54.72%), Query Frame = 1
Query:  256 LLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------TRAKAALAGRNNV--KVACGTKHTVAVDPKAKFTPGGF 957
            LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T+ G+  AFG NK GQLG G+ + +  PSP + + +   +T  ACGA+F++ L   +G ++ + G P+YGQLGH +D ++  +   ++   E  PR        T+    L   N V   VACG  HT+ +D + +    GF
Sbjct:  104 LLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSM-LMDCKG-NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 354          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: RCC2_XENLA (Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.988e-34
Identity = 89/254 (35.04%), Postives = 137/254 (53.94%), Query Frame = 1
Query:  256 LLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------TRAKAALAGRNNV--KVACGTKHTVAVDPKAKFTPGGF 957
            LL  G+T WD +GR++          L  NL  P R   L GV +R VA+G  + H + + VEG+ ++WGRN++GQLGHGD  + D P ++  L       A  GR+HT+ +TE+G+  AFG NK GQLG G+ + +  PSP + L +   +T  ACGA+F++ +      ++ + G P+YGQLGH +D +Y  +   ++   E   R        T+    L   N V   +ACG  H++ +D + +    GF
Sbjct:   97 LLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGAEFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGF 347          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: RCC2_DANRE (Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.206e-31
Identity = 82/253 (32.41%), Postives = 131/253 (51.78%), Query Frame = 1
Query:  256 LLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------TRAKAALAGRNNV--KVACGTKHTVAVDPKAKFTPGGF 957
            LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H + +  EG+ ++WGRN++GQLGHGD  + + P ++  L +  I  A  GR+HT+ +TE+G    FG NK GQLG G+  + +  P+ ++     +   ACGA+F++ +      ++ + G P+YGQLGH +D ++  +   ++   E  PR        T+    L   N V   VACG  HT+ +D + +    GF
Sbjct:   79 LLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGF 329          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 6.633e-22
Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  331 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+       ACG+     L   +  ++ + G   YG+LG G  +         KL Y+ +       +LAG   VKV CG++ +VA+
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYKIE-------SLAGLGVVKVECGSQFSVAL 4309          

HSP 2 Score: 90.1225 bits (222), Expect = 2.884e-17
Identity = 56/218 (25.69%), Postives = 101/218 (46.33%), Query Frame = 1
Query:  277 CWDAVGRRKG-ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            C +    R G  +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P  V  L    V   ACG+     L+  E  ++ + G   +G+LG G     +T     +              L+G   V++ CG + ++A+
Sbjct: 3043 CGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER--------------LSGIGVVQIECGAQFSLAL 3246          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.134e-20
Identity = 66/195 (33.85%), Postives = 99/195 (50.77%), Query Frame = 1
Query:  328 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK-----DSSVKLAYEAQPRTRAKAALAGRN 882
            +P  +  L GV +  ++AG    H +A+ + G  Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + GQLG+G   +          SS +L  E+    +    +AG N
Sbjct:  181 TPQIVEHLAGVPLAQISAG--EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGN 368          

HSP 2 Score: 80.8777 bits (198), Expect = 1.750e-14
Identity = 56/188 (29.79%), Postives = 88/188 (46.81%), Query Frame = 1
Query:  367 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVA 921
            + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  AG +H++ ++  GN  ++G N+ GQLG G   ++ +PS +  L ++ V   ACG   +  L+  +   +   G  ++GQLGH  T NE                R    A L G    ++ACG  HT+A
Sbjct:  139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIACGRWHTLA 309          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: HERC2_HUMAN (Probable E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.171e-18
Identity = 63/219 (28.77%), Postives = 105/219 (47.95%), Query Frame = 1
Query:  271 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            +T + A GR       ++ +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++  L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V   ACG+     L   +  ++ + G   YG+LG G      +    V +  +         +L G   VKV CG++ +VA+
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKID---------SLTGLGVVKVECGSQFSVAL 4212          

HSP 2 Score: 85.5001 bits (210), Expect = 7.104e-16
Identity = 52/219 (23.74%), Postives = 99/219 (45.21%), Query Frame = 1
Query:  277 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            C +A   R G     G +  P ++  L    ++ VA      H  A+ V+G+ ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G     N   +  +              L G+   ++ CG + ++A+
Sbjct: 3016 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--------------LNGQGVCQIECGAQFSLAL 3220          

HSP 3 Score: 78.9518 bits (193), Expect = 6.649e-14
Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 1
Query:  307 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P  V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T            P+   K  L   + VKV CG++ ++A+
Sbjct:  476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT------------PKLIEK--LQDLDVVKVRCGSQFSIAL 672          

HSP 4 Score: 75.8702 bits (185), Expect = 5.629e-13
Identity = 53/187 (28.34%), Postives = 84/187 (44.92%), Query Frame = 1
Query:  373 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            V   C S +  A+  EG  YTWGR   G+LGHG       P +V+ L   K+     G+G + T+ VTE+G   ++G   +G+LG G       P  +  L   +V    CG+ F++ L+  +   + + G     +LGHGT+              E     +    L G+  + VA G+ H +A+
Sbjct:  554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT--KDGQVYSWGKGDNQRLGHGTE--------------EHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724          

HSP 5 Score: 70.8626 bits (172), Expect = 1.811e-11
Identity = 51/148 (34.46%), Postives = 68/148 (45.95%), Query Frame = 1
Query:  301 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 741
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG      RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V  L   +V   ACG+  T+  S+ + AS
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPAS 4323          

HSP 6 Score: 68.5514 bits (166), Expect = 8.986e-11
Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  385 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 741
            C +   +A+   G  +TWG+ +  +LGHG  +   +P +V  L   KI     G  H + VT+ G   A+G N HGQ G+G+     +P+ V+ L  + +T  ACG+  +V  ++V+ A+
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3331          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (Probable E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.529e-18
Identity = 63/219 (28.77%), Postives = 105/219 (47.95%), Query Frame = 1
Query:  271 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            +T + A GR       ++ +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++  L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V   ACG+     L   +  ++ + G   YG+LG G      +    V +  +         +L G   VKV CG++ +VA+
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKID---------SLTGLGVVKVECGSQFSVAL 4214          

HSP 2 Score: 84.3445 bits (207), Expect = 1.583e-15
Identity = 52/220 (23.64%), Postives = 100/220 (45.45%), Query Frame = 1
Query:  274 TCWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            +C +A   R G     G +  P ++  L    ++ VA      H  A+ V+G+ ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G     N   +  +              L G+   ++ CG + ++A+
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--------------LNGQGVCQIECGAQFSLAL 3221          

HSP 3 Score: 79.7221 bits (195), Expect = 3.898e-14
Identity = 56/211 (26.54%), Postives = 99/211 (46.92%), Query Frame = 1
Query:  307 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P  V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T            P+   K  L   + +KV CG++ ++A+
Sbjct:  477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT------------PKLIEK--LQDLDVIKVRCGSQFSIAL 673          

HSP 4 Score: 73.9442 bits (180), Expect = 2.139e-12
Identity = 52/187 (27.81%), Postives = 83/187 (44.39%), Query Frame = 1
Query:  373 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAV 924
            V   C S +  A+  EG  YTWGR   G+LGHG       P +V+ L   K+     G+G + T+ VTE+G   ++G   +G+LG G       P  +  L   +V    CG+ F++ L+  +   + + G     +LGHGT+              E     +    L G+  + VA G+ H + +
Sbjct:  555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT--KDGQVYSWGKGDNQRLGHGTE--------------EHVRYPKLLEGLQGKKVIDVAAGSTHCLVL 725          

HSP 5 Score: 70.8626 bits (172), Expect = 1.811e-11
Identity = 51/148 (34.46%), Postives = 68/148 (45.95%), Query Frame = 1
Query:  301 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 741
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG      RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V  L   +V   ACG+  T+  S+ + AS
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPAS 4325          

HSP 6 Score: 68.5514 bits (166), Expect = 8.986e-11
Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  385 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 741
            C +   +A+   G  +TWG+ +  +LGHG  +   +P +V  L   KI     G  H + VT+ G   A+G N HGQ G+G+     +P+ V+ L  + +T  ACG+  +V  ++V+ A+
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3332          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.912e-18
Identity = 60/155 (38.71%), Postives = 79/155 (50.97%), Query Frame = 1
Query:  328 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHG 786
            SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V  L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEVT  ACG   T  L+ V  + ++ A G    GQLG G
Sbjct:  180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT--LAFVPSSGLIYAFGCGARGQLGTG 330          

HSP 2 Score: 85.1149 bits (209), Expect = 9.278e-16
Identity = 56/186 (30.11%), Postives = 87/186 (46.77%), Query Frame = 1
Query:  385 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAVDPKA 936
            C + HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H+  ++  G    +G N  GQLG    ++   P  V+ L   +V   +CG + T  L+   G     AG    GQLGH + N+            E  PR   +  L G    ++ACG +HT+A  P +
Sbjct:  144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMND------------EVNPRRVLE--LMGSEVTQIACGRQHTLAFVPSS 313          
BLAST of DY262864 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.165e-16
Identity = 57/155 (36.77%), Postives = 75/155 (48.39%), Query Frame = 1
Query:  328 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 789
            SP  L+ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++  L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V   + S VT  ACG   T       G  I + GL   GQLG G+
Sbjct:  180 SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331          

HSP 2 Score: 82.8037 bits (203), Expect = 4.604e-15
Identity = 59/194 (30.41%), Postives = 89/194 (45.88%), Query Frame = 1
Query:  361 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRTRAKAALAGRNNVKVACGTKHTVAVDPKA 936
            DI+ V   C   H +A+      + WG+N+ GQLG G D  ++  P ++  L      +  AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L S+ +    CG D T  L+   G     AG   YGQLGH + +            +E  PR   +  L G    ++ACG +HT A  P +
Sbjct:  136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG--GYGQLGHNSTS------------HEINPRKVFE--LMGSIVTEIACGRQHTSAFVPSS 313          

HSP 3 Score: 67.0106 bits (162), Expect = 1.223e-11
Identity = 55/176 (31.25%), Postives = 81/176 (46.02%), Query Frame = 1
Query:  304 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 825
            G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD +  T    +K
Sbjct:   15 GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLK 185          

HSP 4 Score: 24.2534 bits (51), Expect = 1.223e-11
Identity = 9/34 (26.47%), Postives = 20/34 (58.82%), Query Frame = 3
Query:  933 G*VYTWGLCG*GRLGIKNKKKKWVPLVLNPFKEK 1034
            G ++ WG    G+LG+ ++  ++VP +L   + +
Sbjct:  209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242          
The following BLAST results are available for this feature:
BLAST of DY262864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
RCC2_HUMAN2.348e-3535.43Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2[more]
RCC2_MOUSE5.232e-3535.83Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1[more]
RCC2_XENLA1.988e-3435.04Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=... [more]
RCC2_DANRE1.206e-3132.41Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 S... [more]
HERC2_DROME6.633e-2231.16Probable E3 ubiquitin-protein ligase HERC2 OS=Dros... [more]
HERC5_HUMAN2.134e-2033.85Probable E3 ubiquitin-protein ligase HERC5 OS=Homo... [more]
HERC2_HUMAN1.171e-1828.77Probable E3 ubiquitin-protein ligase HERC2 OS=Homo... [more]
HERC2_MOUSE1.529e-1828.77Probable E3 ubiquitin-protein ligase HERC2 OS=Mus ... [more]
HERC3_HUMAN9.912e-1838.71Probable E3 ubiquitin-protein ligase HERC3 OS=Homo... [more]
HERC4_HUMAN4.165e-1636.77Probable E3 ubiquitin-protein ligase HERC4 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AF11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262864 ID=DY262864; Name=DY262864; organism=Citrus clementina; type=EST; length=1241bp
TTTCGTTTTCTTCTTCACTTCCGTCCAACTGCTTAAACCCTAATTTTTCG
ATCTCGGATACTAGCCGTTATCTCCCCCTTTCCCGCCAATTTTACCCTTA
TTTTGGCCGTTGCTTGTTCATATTTCAAAACGCAAGCATCTAGATCTGCT
CCATTGGGCTTATTTGACCCTTCCTCGCGCGTTTGACTTGAAATGGCGGA
GCTAGAGGCCGAGAAGATGGTGGAAGAAGAGACTGGGAAGGAGAAGGGAG
GAGAGCTGTTGTTTTGCGGATCCACGTGTTGGGATGCTGTTGGTCGACGC
AAAGGTGCTCTTGATGGCAACTTGGTTTCTCCCACTCGCCTCCGCCCCCT
CGTAGGAGTCGACATCCGCTTCGTTGCCGCCGGTTGCGTGTCGTGCCATT
GTGTGGCAGTAGACGTTGAAGGGCGATGCTATACTTGGGGACGCAATGAG
AGGGGGCAATTGGGTCATGGAGATAAAATTCAGCGTGATAGGCCGACAAT
TGTTTCTGAACTTTCCAAGTACAAAATTAAAAAGGCTGGAGCAGGGAGGA
GTCATACTGTGGTGGTTACTGAAGATGGTAATTCTTTAGCCTTTGGTTGG
AATAAGCATGGGCAGCTGGGTTCAGGCTCGATAAGAAATGAAATTGAGCC
ATCTCCTGTTCGCTGTCTTGTGTCTGAAGTCACTGCTACTGCTTGTGGGG
CTGACTTCACAGTTTGGTTATCTTCTGTTGAAGGAGCATCTATATTGAAT
GCCGGCCTTCCCCAGTATGGTCAGCTTGGTCATGGAACTGACAATGAGTA
TAATACTAAGGATAGCTCTGTGAAACTTGCGTACGAAGCCCAACCACGAA
CCAGAGCTAAAGCTGCTCTTGCAGGAAGAAACAATGTGAAGGTTGCATGT
GGAACAAAACATACAGTGGCTGTGGATCCCAAGGCTAAGTTTACACCTGG
GGGCTTTGTGGTTAGGGAAGGCTGGGAATAAAGAACAAAAAAAAGAAGTG
GGTTCCCCTCGTGTTGAACCCTTTTAAAGAAAAAGGTCAACCTCCTGAAA
CGGTTATTTTTCCCGGGTTTTTTAACCCTTTCCGTTTTGGCAGGGGGGGG
AAAGTTTTAATCTGGGGGGGAAAACTTAAAAAAAAAGGGGAAGGGCGGGG
GAGTATCACCAAACCCCCCCCCGGGGAATTTTATAAGGGGAAGGGAATTA
TTTCATTTTGTGGATGGGTATTTAGGGCGCAATAAAATCCC
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