DY262886

Overview
NameDY262886
Unique NameDY262886
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1226
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP1_HUMAN (Transcription factor Dp-1 OS=Homo sapiens GN=TFDP1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.127e-40
Identity = 88/158 (55.70%), Postives = 114/158 (72.15%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQT 869
            +K+G+GLR FSMKVCEKV+ KG T+YNEVADELVAEF+   N +  P++  YD+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP  S  + + L+ ER     RI++K + LQEL  Q +  +NL+QRN   E+  S    P+  + LPFI+V T
Sbjct:  110 EKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHIL-PNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASRPPPPNSVIHLPFIIVNT 266          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP1_MOUSE (Transcription factor Dp-1 OS=Mus musculus GN=Tfdp1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.033e-39
Identity = 86/158 (54.43%), Postives = 112/158 (70.89%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGN---APSGGVALPFILVQT 869
            +K+G+GLR FSMKVCEKV+ KG T+YNEVADELVAEF+   N +  P++  YD+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP  S  + + L+ ER     RI++K + LQEL  Q +  +NL+QRN +          P+  + LPFI+V T
Sbjct:  110 EKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHIL-PNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQAEQQARRPPPPNSVIHLPFIIVNT 266          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP1_BOVIN (Transcription factor Dp-1 OS=Bos taurus GN=TFDP1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.655e-39
Identity = 88/158 (55.70%), Postives = 114/158 (72.15%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQT 869
            +K+G+GLR FSMKVCEKV+ KG T+YNEVADELVAEF+  ++S   P +  YD+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP  S  + + L+ ER     RI++K + LQEL  Q +  +NL+QRN   E+  S    P+  + LPFI+V T
Sbjct:  110 EKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFS-AADSHILPSESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQSLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQVEQQASRPPPPNSVIHLPFIIVNT 266          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP2_HUMAN (Transcription factor Dp-2 OS=Homo sapiens GN=TFDP2 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 3.468e-39
Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAP---SGGVALPFILVQT 869
            DK+G+GLR FSMKVCEKV+ KG T+YNEVADELV+EF + +N LA      YD+KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP  S  + + L+ E+     RI++K A LQEL  Q +  +NL+QRN +       P   +  + LPFI++ T
Sbjct:  126 DKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAA--DSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINT 281          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP_DROME (Transcription factor Dp OS=Drosophila melanogaster GN=Dp PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 6.122e-36
Identity = 84/157 (53.50%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAPS--GGVALPFILVQT 869
            DK+G+GLR FSMKVCEKVE KG+TTYNEVAD+LV+E  +  N+         D+KNIRRRVYDALNVLMA+++ISKDKKEI+W GLP  S      L+ E    R RI++K   L+E+  Q V  + L++RN+R  S G  PS    + LPFI+V T
Sbjct:  164 DKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSE--EMKNNAY---DNNCDQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTETFLALEEENCQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVPSPNASIQLPFIIVNT 315          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP2_MOUSE (Transcription factor Dp-2 OS=Mus musculus GN=Tfdp2 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.011e-30
Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAP---SGGVALPFILVQT 869
            DK+G+GLR FSMKVCEKV+ KG T+YNEVADELV+EF + +N LA      YD++NIRRRVYDALNVLMAM+IIS      +   +   S  + + L+ E+     RI++K A LQEL  Q +  +NL+QRN +       P   +  + LPFI++ T
Sbjct:  126 DKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAA--DSAYDQENIRRRVYDALNVLMAMNIISSLPTGKKRNQVDCNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPAVNSTIQLPFIIINT 281          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP1_CAEEL (Transcription factor dpl-1 OS=Caenorhabditis elegans GN=dpl-1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.011e-30
Identity = 75/160 (46.88%), Postives = 101/160 (63.12%), Query Frame = 3
Query:  420 GLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPD--QQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRNERLYSSGNAPSGGVA--LPFILVQTRPHATV 887
            GLR FS KVCEKV+ KG T YNEVADELVA++   +N +   D  +Q+YD KNIRRRVYDALNVL+AM+II+K KK+I+W GLP ++  +I  L+ E+      I  K   L+E+  Q V  +NL++RN +       P       LPF+++ T   A V
Sbjct:   72 GLRHFSTKVCEKVKEKGLTNYNEVADELVADYFQ-NNLIKQIDVVKQEYDMKNIRRRVYDALNVLLAMNIITKSKKDIRWIGLPASASQEISRLEEEKSRREASISSKKQALEEMVLQIVSYKNLVERNRKNEHKNGRPENDTVLHLPFLIINTDKEANV 230          
BLAST of DY262886 vs. ExPASy Swiss-Prot
Match: TFDP3_HUMAN (Transcription factor Dp family member 3 OS=Homo sapiens GN=TFDP3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.698e-28
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 3
Query:  405 DKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKTAYLQELEDQFVGLQNLIQRN---ERLYSSGNAPSGGVALPFILVQT 869
            +K+G GL + SMKV E V+ KG T+  EV  ELVA+F   SN  A+P++  YD KNI+RR YDALNVLMAM+IIS++KK+I+W GL   S  + + L+ ER     RI++K + LQ+L  Q +  +NL+ RN   E   S    P+  + +PFI++ +
Sbjct:  105 EKNGMGLCRLSMKVWETVQRKGTTSCQEVVGELVAKFRAASNH-ASPNESAYDVKNIKRRTYDALNVLMAMNIISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEEQVSQRPLPNSVIHVPFIIISS 261          
The following BLAST results are available for this feature:
BLAST of DY262886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TFDP1_HUMAN9.127e-4055.70Transcription factor Dp-1 OS=Homo sapiens GN=TFDP1... [more]
TFDP1_MOUSE2.033e-3954.43Transcription factor Dp-1 OS=Mus musculus GN=Tfdp1... [more]
TFDP1_BOVIN2.655e-3955.70Transcription factor Dp-1 OS=Bos taurus GN=TFDP1 P... [more]
TFDP2_HUMAN3.468e-3954.43Transcription factor Dp-2 OS=Homo sapiens GN=TFDP2... [more]
TFDP_DROME6.122e-3653.50Transcription factor Dp OS=Drosophila melanogaster... [more]
TFDP2_MOUSE1.011e-3048.10Transcription factor Dp-2 OS=Mus musculus GN=Tfdp2... [more]
TFDP1_CAEEL1.011e-3046.88Transcription factor dpl-1 OS=Caenorhabditis elega... [more]
TFDP3_HUMAN4.698e-2844.94Transcription factor Dp family member 3 OS=Homo sa... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10AH11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262886 ID=DY262886; Name=DY262886; organism=Citrus clementina; type=EST; length=1226bp
TTTTCTTCAACCCAGCCACTTTGTCATTTTTATCAACGCATAGCAATACT
AATGCTCAAAACCCCATAAAAAAATTTACTAAGAATCGATTGATTAATTG
ATAATTTTTACTCTTTTTTGTATTTATGGTTACTGGGAATAACAGCCACC
AGGAGGATGGTGACCGCCAACAACCGGCAGCCAAAGGGGGAGGGGCTACG
CGGTCGTGGGGCACCACCGTTTCCGGCCAATCAGTCTCTACAAGCGGCAG
CGTGGGGTCGCCGTCGCAAAGCATGGCTACGCCAGCAAGTGATAGCACCT
TTCTCCGGCTAAACCACCTTGACATTCACGGTGATGATGCCGGCTCCCAA
GGCGCTGTTGTCGGTGGCAAGAAGAAAAAGAGAGGTCAAAGGGCGGGCGG
AGGAGATAAAAGTGGCCGAGGACTTCGCCAATTTAGCATGAAAGTGTGTG
AGAAAGTGGAAAGCAAGGGAAGAACTACATACAATGAGGTTGCAGATGAG
CTTGTGGCTGAATTTGCTGATCCTAGCAATAGTTTAGCAACCCCAGATCA
GCAACAATATGATGAGAAAAACATAAGACGAAGGGTATATGATGCCCTAA
ATGTACTGATGGCGATGGATATTATATCAAAGGATAAAAAGGAAATACAG
TGGAAGGGTCTTCCTCGCACTAGCCTGAATGACATTGAAGAATTAAAGGC
TGAGCGTCTTGGACTGAGAAATAGAATTGAAAAGAAAACTGCCTATCTGC
AGGAACTGGAGGATCAATTTGTAGGACTTCAAAACCTTATACAACGAAAT
GAGCGATTATACAGTTCAGGAAATGCTCCCAGTGGGGGTGTGGCTTTACC
TTTTATTCTGGTGCAGACACGACCTCATGCAACCGTTTGAAATGGAAATA
TCAAAAGATATGCCCCTGGGGCATTTTGACTTTTATAACACCCCTTTTAA
GCTTCCTGAACGACAATTCTGGTTCTGAAGGCATTGAAATTTTGTGAGAG
ACAAACAAAATGATGATATGGCAAAAAAGTTTTTCCTGCCAAAAGAAGGT
GAAAAGGTCAAGCCAGGGGCGGGGGGGTGTATCACCCAACAACAACCCCC
TTCCCCCCACCTCCGGGCAAAAAAACATTAAAAAAAGGGCCCTCCCCCCT
TACCCACCCGTGGTTTCGGGGTAAAAATCTAAGGGGCCCCGGGTGGGAAA
AAAAAGAAAACAATTTTAAATAAAAA
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