DY263004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 532.332 bits (1370), Expect = 2.354e-150 Identity = 263/329 (79.94%), Postives = 287/329 (87.23%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQIQRT*KPM--MSFTTDSVSDGQE*GCCSNKAKRRESNR 1042 MQYK+LGRSGLRVSQLSYGAWV+FGNQLDVKEAK+LLQ CRD GVNFFDNAEVYANGRAEEIMGQA+R+LGW+RSD+VVSTK+FWGGQGPNDKGLSRKHIVEG + SLKRLDMDYVDV+YCHRPD +TP+EETVRAMN+VID G AFYWGTSEWSAQQITEAW +A RLDLVGPIVEQPEYN+ SRHKVE+E+LPLYS YG+GLTTWSPLASGVLTGKY KG+IP DSRFALENYKNLA+RSLVDD L KVN LKPIA ELGV LAQLAIAWCASNPNVSSVITG TKE+QI K + + T V D E +K KR ES R Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVEQPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASGVLTGKYAKGNIPADSRFALENYKNLANRSLVDDTLRKVNGLKPIASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDVIPLLTPEVVDKIE-AVVQSKPKRTESYR 328
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 2.482e-83 Identity = 148/293 (50.51%), Postives = 208/293 (70.99%), Query Frame = 2 Query: 68 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL +DYVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ Y+ L + L ++ + +LK IA+ LG L QLAIAWC N VSSV+ G + Q+ Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYD-GGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQL 330
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 3.241e-83 Identity = 147/293 (50.17%), Postives = 208/293 (70.99%), Query Frame = 2 Query: 68 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ Y+ L + L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ G + Q+ Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQL 330
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 4.234e-83 Identity = 147/293 (50.17%), Postives = 208/293 (70.99%), Query Frame = 2 Query: 68 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ Y+ L + L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ G + Q+ Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQL 330
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 4.234e-83 Identity = 147/293 (50.17%), Postives = 208/293 (70.99%), Query Frame = 2 Query: 68 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ Y+ L + L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ G + Q+ Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQL 330
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 308.145 bits (788), Expect = 7.221e-83 Identity = 147/293 (50.17%), Postives = 207/293 (70.65%), Query Frame = 2 Query: 68 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ Y+ L + L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ G + Q+ Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQL 330
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 2.744e-82 Identity = 143/295 (48.47%), Postives = 208/295 (70.51%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQL 364
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 2.744e-82 Identity = 143/295 (48.47%), Postives = 208/295 (70.51%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQL 364
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 2.744e-82 Identity = 143/295 (48.47%), Postives = 208/295 (70.51%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQL 364
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 4.681e-82 Identity = 143/295 (48.47%), Postives = 207/295 (70.17%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 78 MAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQL 371 The following BLAST results are available for this feature:
BLAST of DY263004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263004 ID=DY263004; Name=DY263004; organism=Citrus clementina; type=EST; length=1303bpback to top |