DY263008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY263008 vs. ExPASy Swiss-Prot
Match: XPO4_MOUSE (Exportin-4 OS=Mus musculus GN=Xpo4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.133e-13 Identity = 71/266 (26.69%), Postives = 123/266 (46.24%), Query Frame = 1 Query: 211 AEATILGLCQSPQPYKACQFILENSQVXXXXXXXXXXXXXXXXXEWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFSPST-SSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKAC-TAALRLLHQILNWDFQFDTSGRKISIIVFSAGVRTENSSSKKSECIIFQPGPAWCDALISSGHMVGF*TYFR 1002 AE L +S P+ C+ ILE S+V EW L +SL F L +V+Q + + YV+ +I A ++KRG LD S D ++ F +V Q ++ Q + + L +L+SEFS S+ +S +GL EFH C+ + + L+ + + V ++ + ++++ + L L +Q+L+W+F GR I +F + S+ ++ +P +W +AL+ S M F T R Sbjct: 37 AEHIFLSFRKSKSPFAVCRHILETSKVDYVLFQAATAIMEAVVREWVLLEKGSIESLRTFLLTYVLQRPNLQK-YVREQILLAVAVIVKRGSLD-KSIDCKSIFHEVSQ-LISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFM----LTVGVLQEFSRRENLSAQMSSVFQRYLALANQVLSWNFLPPNLGRHY-IAMF-----------ESSQNVLLKPTESWREALLDSRVMELFFTVHR 283
BLAST of DY263008 vs. ExPASy Swiss-Prot
Match: XPO4_CHICK (Exportin-4 OS=Gallus gallus GN=XPO4 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.638e-13 Identity = 72/270 (26.67%), Postives = 122/270 (45.19%), Query Frame = 1 Query: 211 AEATILGLCQSPQPYKACQFILENSQVXXXXXXXXXXXXXXXXXEWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFSPST-SSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAA-----LRLLHQILNWDFQFDTSGRKISIIVFSAGVRTENSSSKKSECIIFQPGPAWCDALISSGHMVGF*TYFR 1002 AE L +S P+ C+ ILE S+V EW L +SL F L +V+Q + + YV+ +I A ++KRG LD S D ++ F +V Q ++ Q + + L +L+SEFS S+ +S +GL EFH C+ + D L+ + +T ++++ + A ++ L L +Q+L+W+F GR I +F + S+ ++ +P +W + L+ S M F T R Sbjct: 40 AEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKTSIESLRTFLLTYVLQRPNLQK-YVREQILLAVAVIVKRGSLD-KSIDCKSIFHEVSQ-LISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRIFQEDDLRQIF--------MLTVEVLQEFRRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHY-IAMF-----------ESSQNVMLKPTESWRETLLDSRVMELFFTVHR 286
BLAST of DY263008 vs. ExPASy Swiss-Prot
Match: XPO4_HUMAN (Exportin-4 OS=Homo sapiens GN=XPO4 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 4.751e-13 Identity = 71/270 (26.30%), Postives = 123/270 (45.56%), Query Frame = 1 Query: 211 AEATILGLCQSPQPYKACQFILENSQVXXXXXXXXXXXXXXXXXEWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFSPST-SSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAA-----LRLLHQILNWDFQFDTSGRKISIIVFSAGVRTENSSSKKSECIIFQPGPAWCDALISSGHMVGF*TYFR 1002 AE L +S P+ C+ ILE S+V EW L +SL F L +V+Q + + YV+ +I A ++KRG LD S D ++ F +V Q ++ Q + + L +L+SEFS S+ +S +GL EFH C+ + + L+ + +T ++++ + + A ++ L L +Q+L+W+F GR I +F + S+ ++ +P +W + L+ S M F T R Sbjct: 37 AEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQRPNLQK-YVREQILLAVAVIVKRGSLD-KSIDCKSIFHEVSQ-LISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIF--------MLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHY-IAMF-----------ESSQNVLLKPTESWRETLLDSRVMELFFTVHR 283
BLAST of DY263008 vs. ExPASy Swiss-Prot
Match: XPO4_XENLA (Exportin-4 OS=Xenopus laevis GN=xpo4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.805e-12 Identity = 70/270 (25.93%), Postives = 123/270 (45.56%), Query Frame = 1 Query: 211 AEATILGLCQSPQPYKACQFILENSQVXXXXXXXXXXXXXXXXXEWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFSPST-SSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAA-----LRLLHQILNWDFQFDTSGRKISIIVFSAGVRTENSSSKKSECIIFQPGPAWCDALISSGHMVGF*TYFR 1002 AE L +S P+ C+ ILE S+V EW L +SL F L +V+Q + + YV+ +I A ++KRG LD S D ++ F +V Q + + Q + + L +L+ EFS S+ +S +GL EFH C+ + + L+ + +T ++++ + + A ++ L L +Q+L+W+F GR I +F + S+ ++ +P +W + L++S M F T R Sbjct: 36 AEHVFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQK-YVREQILLAVAVIVKRGSLD-KSIDCKSIFHEVSQLISSCNPT-MQTLACSILTALLIEFSSSSKTSNIGLSMEFHGSCKRVFQDEDLRRIF--------MLTIEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHY-IAMF-----------ESSQNVMLKPTESWRETLLNSRVMELFFTVHR 282
BLAST of DY263008 vs. ExPASy Swiss-Prot
Match: XPO4_DANRE (Exportin-4 OS=Danio rerio GN=xpo4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.022e-12 Identity = 72/270 (26.67%), Postives = 122/270 (45.19%), Query Frame = 1 Query: 211 AEATILGLCQSPQPYKACQFILENSQVXXXXXXXXXXXXXXXXXEWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFSPST-SSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAA-----LRLLHQILNWDFQFDTSGRKISIIVFSAGVRTENSSSKKSECIIFQPGPAWCDALISSGHMVGF*TYFR 1002 AE L +S P+ C+ ILE S+V EW L + +SL F L +V+Q + + YV+ +I A ++KRG LD S + ++ F +V Q ++ Q + + L +L+SEFS S +S +GL EFH C+ + D L+ + +T ++++ + + A + L L +Q+L+W+F GR I +F A T N ++ +P +W ++L+ M F T R Sbjct: 36 AEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKNSIESLRTFLLTYVLQRPNLQK-YVREQILLAVAVIVKRGSLD-KSINCKSIFLEVSQ-LISSGNPTVQTLACSILTALLSEFSSSNKTSNIGLSMEFHGSCKRIFQEDDLRQIF--------MLTMEVLQEFSRRENLNAQMSCVFQRYLALANQVLSWNFLPPNLGRHY-IAMFEA---TPN--------VMLKPTESWRESLLDHRVMDLFFTVHR 282 The following BLAST results are available for this feature:
BLAST of DY263008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263008 ID=DY263008; Name=DY263008; organism=Citrus clementina; type=EST; length=1329bpback to top |