DY263012

Overview
NameDY263012
Unique NameDY263012
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1205
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_HUMAN (Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 3.045e-87
Identity = 111/200 (55.50%), Postives = 153/200 (76.50%), Query Frame = 2
Query:  284 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGW 883
            L  +KH  YI S   KKD +E  + E+LR++G YWGLT +D++G+L  ++ E+++++I  CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV  YV GLQ  DGSF+GDIWGE+DTRFS+ A+  L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC G LAI   LH V+ DLLGW
Sbjct:   18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGW 217          

HSP 2 Score: 86.2705 bits (212), Expect = 3.045e-87
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 3
Query:  876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L  W+CERQ+ SGGL GRPEKLPDVCYSWWVL+SL +I ++HWI++ +L  F+L     E G
Sbjct:  215 LGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276          

HSP 3 Score: 72.7886 bits (177), Expect = 4.606e-12
Identity = 45/167 (26.95%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  293 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 790
            +K V+Y+  ++K+  SF   +   +    ++  + TL +LGKLDA++ E  I ++L C +  GGF    G + H          LA+  +L  +++D +  ++   Q   G  +G      D  +S+  +  L I+ RL  I+ +K   +I++C++ + GGF   PG
Sbjct:  117 NKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPG 283          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_BOVIN (Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.957e-86
Identity = 110/200 (55.00%), Postives = 152/200 (76.00%), Query Frame = 2
Query:  284 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGW 883
            L  +KH  YI S   KKD +E  + E+LR++G YWGLT +D++G+L  ++ E+++++I  CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV  YV  LQ  DGSF+GDIWGE+DTRFS+ A+  L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC G LAI   LH V+ DLLGW
Sbjct:   18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGW 217          

HSP 2 Score: 86.2705 bits (212), Expect = 1.957e-86
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 3
Query:  876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L  W+CERQ+ SGGL GRPEKLPDVCYSWWVL+SL +I ++HWI++ +L  F+L     E G
Sbjct:  215 LGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETG 276          

HSP 3 Score: 74.3294 bits (181), Expect = 1.583e-12
Identity = 46/167 (27.54%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  293 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 790
            +K V+Y+ S++K+  SF   +   +    ++  + TL +LGKLDA++ E  I ++L C +  GGF    G + H          LA+  +L  +++D +  ++   Q   G  +G      D  +S+  +  L I+ RL  I+ +K   +I++C++ + GGF   PG
Sbjct:  117 NKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_RAT (Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus GN=Rabggtb PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.392e-86
Identity = 110/200 (55.00%), Postives = 151/200 (75.50%), Query Frame = 2
Query:  284 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGW 883
            L  +KH  YI S   KKD +E  + E+LR++G YWGLT +D++G+L  +++E+++ +I  CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV  YV  LQ  DGSF+GDIWGE+DTRFS+ A+  L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC G LAI   LH V+ DLLGW
Sbjct:   18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGW 217          

HSP 2 Score: 86.2705 bits (212), Expect = 7.392e-86
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 3
Query:  876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L  W+CERQ+ SGGL GRPEKLPDVCYSWWVL+SL +I ++HWI++ +L  F+L     E G
Sbjct:  215 LGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETG 276          

HSP 3 Score: 75.485 bits (184), Expect = 7.106e-13
Identity = 47/167 (28.14%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  293 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 790
            DK V Y+ S++K+  SF   +   +    ++  + TL +LGKLDA++ E  I ++L C +  GGF    G + H          LA+  +L  +++D +  ++   Q   G  +G      D  +S+  +  L I+ RL  I+ +K   +I++C++ + GGF   PG
Sbjct:  117 DKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG 283          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_DICDI (Probable geranylgeranyl transferase type-2 subunit beta OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.835e-84
Identity = 120/200 (60.00%), Postives = 149/200 (74.50%), Query Frame = 2
Query:  284 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGW 883
            L  DKHV+YI+ +  KKDSFE  V EH+R+NG YWGL++L +L  LD +D+ +VI W+L CQ  +GGF GN  HD H+L TLSAVQ+L  +D LD +D + V +YV  LQ  DGSF GD WGEVDTRFSY AI CLS+L+ LDKIN +KAVEYI+SC+N DGGFG  PG ESH+GQIF CVGAL+I   ++ +D D LGW
Sbjct:   22 LLIDKHVEYIVKLGSKKDSFEYWVTEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDKLGW 221          

HSP 2 Score: 77.411 bits (189), Expect = 8.835e-84
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 3
Query:  876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L  W+ ERQ+ +GGL GRPEK  DVCYSWWVLS+L  ID++HWI+  +L  ++L+    E G
Sbjct:  219 LGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNETG 280          

HSP 3 Score: 74.3294 bits (181), Expect = 1.583e-12
Identity = 44/164 (26.83%), Postives = 81/164 (49.39%), Query Frame = 2
Query:  302 VKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCK-NLDGGFGCTPG 790
            V Y++ ++++  SF       +    +Y  +  L +L  LD ++ E  + +IL CQ+  GGF    G + H     + V  L++ ++++ +D DK+  +++  Q  +G  +G      D  +S+  +  LS + RL  I+ DK   YI+ C+ N  GG    PG
Sbjct:  124 VDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNETGGIADKPG 287          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_MOUSE (Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.260e-82
Identity = 110/200 (55.00%), Postives = 150/200 (75.00%), Query Frame = 2
Query:  284 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGW 883
            L  +KH  YI S   KKD +E  + E+LR++G YWGLT +D++G+L  ++ E+++ +I  CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV  YV  LQ  DGSF+GDIWGE+DTRFS+ A+  L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC G LAI   LH V+ DLLGW
Sbjct:   26 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGW 225          

HSP 2 Score: 75.8702 bits (185), Expect = 1.260e-82
Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 3
Query:  876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L  W+CE Q+ SG L GR EKLPDVCYSWWVL+SL +I ++HWI   +L  F+L     E G
Sbjct:  223 LGWWLCEAQLPSGALNGRREKLPDVCYSWWVLASLKIIGRLHWIVSEKLRSFILACQDEETG 284          

HSP 3 Score: 75.0998 bits (183), Expect = 9.280e-13
Identity = 47/167 (28.14%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  293 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 790
            DK V Y+ S++K+  SF   +   +    ++  + TL +LGKLDA++ E  I ++L C +  GGF    G + H          LA+  +L  +++D +  ++   Q   G+ +G      D  +S+  +  L I+ RL  I  +K   +I++C++ + GGF   PG
Sbjct:  125 DKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCEAQLPSGALNGRREKLPDVCYSWWVLASLKIIGRLHWIVSEKLRSFILACQDEETGGFADRPG 291          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_SCHPO (Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe GN=ptb1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.369e-69
Identity = 94/203 (46.31%), Postives = 131/203 (64.53%), Query Frame = 2
Query:  275 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGW 883
            M  L  DKH+ Y+  +  + D  +  + EHL ++  YW   +  +L K D +D+E ++S++L C  ESGGFA   GHD H+  T+ AVQVLA+ D L ++D DKV++Y+ GLQN DGS  GD WGE+D RF Y  I CL+IL +LD +N + AV++++ C N DGGFG  PG ESH   +F CV AL I   L  +D++LLGW
Sbjct:    1 MAVLLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVAALKILNKLDLIDEELLGW 203          

HSP 2 Score: 81.2629 bits (199), Expect = 1.369e-69
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  858 MLTRTFLAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            ++    L  W+ ERQVK GGL GRPEKLPD CY WW LS L +I K+ WI++ QL+ FLL     ++G
Sbjct:  195 LIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDWIDRNQLIDFLLGTQDADSG 262          

HSP 3 Score: 73.559 bits (179), Expect = 2.700e-12
Identity = 40/160 (25.00%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  293 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGG 772
            DK   YII ++ +  S +      +     Y G+  L ILGKLD +++   + W++KC +  GGF    G + H     + V  L + +KLD++D + +  +++  Q   G  +G      D+ + +  +  L+I+ +LD I+ ++ +++++  ++ D G
Sbjct:  103 DKVASYIIGLQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDWIDRNQLIDFLLGTQDADSG 262          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_YEAST (Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae GN=BET2 PE=1 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 1.935e-65
Identity = 101/206 (49.03%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  284 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADK---VSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLLGWVG 889
            L  +KH++YI S++ KK +FE  + EHLRLNG YWGLT L +L   +   +E+VIS++L C D+  G FA    HD H+L TLSAVQ+LA +D LD+L  D+   + +++ G Q  DGSF GD +GEVDTRF Y A+  LSIL  L    VD AV++++ C N DGGFG  P  ESH+ Q F C+GALAIA  L  +  D L  +G
Sbjct:    7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLSCWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSFQGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCLGALAIANKLDMLSDDQLEEIG 212          

HSP 2 Score: 81.6481 bits (200), Expect = 1.935e-65
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3
Query:  885 WVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            W+CERQ+  GGL GRP KLPDVCYSWWVLSSL +I ++ WIN  +L +F+L+    + G
Sbjct:  214 WLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQDEKKG 272          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB2_CANAL (Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans GN=BET2 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.729e-57
Identity = 95/214 (44.39%), Postives = 132/214 (61.68%), Query Frame = 2
Query:  296 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKC-QDESGGFAGNIGHDPHVLYTLSAVQVLALFDK-LDILDADKVSN----------YVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKD-----LLGWV 886
            KHV+YI+  E  + SFE  + EHLR+NG YWG+T L  + +L A+ ++DVI +I+ C  D++G F     HD H+L TLSA+QVL ++D+ L +L+ +  S+          ++ GLQ  DGSF GD +GEVDTRF Y A+  LS+L  L     D A  +I+ C N DGGFG  PG ESH+ Q+F CVGALAI   L  +D +     L+ W+
Sbjct:   17 KHVQYIVEQESHR-SFEYWLSEHLRMNGLYWGVTALITMNELSALAQQDVIDYIMLCWDDKTGAFGSFPKHDGHILSTLSALQVLKIYDQELTVLNDNNESSNGNKRERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFNFDGGFGLIPGSESHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWL 229          

HSP 2 Score: 74.7146 bits (182), Expect = 1.729e-57
Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 3
Query:  876 LAGWVCERQV-KSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L  W+ ERQV  SGG  GRPEKLPDVCYSWWVLSSL ++ + +W++   L  F+L    +ENG
Sbjct:  225 LIDWLTERQVLPSGGFNGRPEKLPDVCYSWWVLSSLSILKRKNWVDLKILENFILTCQDLENG 287          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: GGTB2_CAEEL (Probable geranylgeranyl transferase type-2 subunit beta OS=Caenorhabditis elegans GN=ggtb-1 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 4.553e-52
Identity = 92/197 (46.70%), Postives = 134/197 (68.02%), Query Frame = 2
Query:  281 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKD 871
            EL  D H  +I   EK K+S+  ++ EHLR++G YW +  +D+  +L+ +  E++++++L C++  GG+    GHD H+L+TL AVQ L +F+ ++  DAD +S YV GLQ  DGSF GD+ GEVDTRF+  ++    +L RL  +N+D AV +++ C N DGGFG  PG ESHSGQI+CCVGALAIA  L  +D+D
Sbjct:   23 ELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRD 219          

HSP 2 Score: 71.633 bits (174), Expect = 1.026e-11
Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 3
Query:  834 LLLPGLCIMLTRTFLAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLLEWSGMENG 1061
            L + G    + R   A W+  RQ  SGGL GRPEKLPDVCYSWWVL+SL ++ ++++I+   + KF+      E G
Sbjct:  207 LAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETG 282          

HSP 3 Score: 69.3218 bits (168), Expect = 5.092e-11
Identity = 43/168 (25.60%), Postives = 83/168 (49.40%), Query Frame = 2
Query:  290 ADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPG 790
            AD   +Y+  ++++  SF   +   +        L T  +LG+L  ++ +  + ++++C +  GGF    G + H       V  LA+  +LD +D D+ + ++A  Q   G  +G      D  +S+  +  L+IL RL+ I+ D   ++I +C++ + GGF   PG
Sbjct:  122 ADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPG 289          
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_HUMAN (Protein farnesyltransferase subunit beta OS=Homo sapiens GN=FNTB PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.343e-25
Identity = 66/207 (31.88%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  284 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVD-KDLLGWV 886
            L  +KH  Y+   + +  D++E +      L   YW L +L++L + +  +   DV  ++  CQ   GGF G  G  PH+  T +AV  L +    +  DI++ +K+  Y+  L+  DGSF   + GEVD R +Y A    S+   +     +   E+I  C+N +GG G  PG E+H G  FC + AL I      ++ K LL WV
Sbjct:   73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWV 277          

HSP 2 Score: 35.039 bits (79), Expect = 4.343e-25
Identity = 17/41 (41.46%), Postives = 23/41 (56.10%), Query Frame = 3
Query:  876 LAGWVCERQVK-SGGLYGRPEKLPDVCYSWWVLSSLVMIDK 995
            L  WV  RQ++  GG  GR  KL D CYS+W    L ++ +
Sbjct:  273 LLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313          
The following BLAST results are available for this feature:
BLAST of DY263012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PGTB2_HUMAN3.045e-8755.50Geranylgeranyl transferase type-2 subunit beta OS=... [more]
PGTB2_BOVIN1.957e-8655.00Geranylgeranyl transferase type-2 subunit beta OS=... [more]
PGTB2_RAT7.392e-8655.00Geranylgeranyl transferase type-2 subunit beta OS=... [more]
PGTB2_DICDI8.835e-8460.00Probable geranylgeranyl transferase type-2 subunit... [more]
PGTB2_MOUSE1.260e-8255.00Geranylgeranyl transferase type-2 subunit beta OS=... [more]
PGTB2_SCHPO1.369e-6946.31Geranylgeranyl transferase type-2 subunit beta OS=... [more]
PGTB2_YEAST1.935e-6549.03Geranylgeranyl transferase type-2 subunit beta OS=... [more]
PGTB2_CANAL1.729e-5744.39Geranylgeranyl transferase type-2 subunit beta OS=... [more]
GGTB2_CAEEL4.553e-5246.70Probable geranylgeranyl transferase type-2 subunit... [more]
FNTB_HUMAN4.343e-2531.88Protein farnesyltransferase subunit beta OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263012 ID=DY263012; Name=DY263012; organism=Citrus clementina; type=EST; length=1205bp
CACTCTCTCCTTCTCCGGTCACCATCTTACTCTCACGGTCTCTCAACGTC
TCATTCTCTCAGCCTGACTGCCGTCAGCCCCACCTCCCCCAGTTTCCTCA
AGAACTCGACTTCCGCTAGCCCCAACCGTCGCTGGCTGCGTCTCCTCCTC
AGGCGCATTCCAACGTCAGTAAAGCTGAGGCCTTCCCTCAAATTTTGGCT
GAAGTGGCTAAAGAAAGTTCTCATTTGCTGTTGTGAAGCCGCTGCCGCTG
ACATCACTGCTGCTGCATTTGGAGATGGGAGAGCTGGCTGCAGATAAACA
TGTGAAATACATTATTTCAGTTGAGAAGAAAAAGGATAGTTTTGAATCTG
TGGTGATGGAACATTTGAGATTGAATGGGGCATATTGGGGGCTGACGACC
CTCGATATTTTAGGAAAGCTTGATGCTGTAGATGAAGAAGATGTTATTTC
ATGGATCTTGAAGTGTCAGGATGAATCTGGTGGTTTTGCTGGTAATATTG
GACATGATCCACATGTGTTGTATACCCTCAGCGCCGTGCAAGTTTTGGCC
CTTTTTGATAAGTTAGATATTCTTGATGCCGATAAGGTGTCAAATTATGT
TGCGGGGCTGCAAAATGGAGATGGCTCCTTTTCTGGAGACATATGGGGGG
AAGTGGATACACGGTTTTCTTATATCGCTATATGTTGTCTCTCAATACTA
CAGCGGCTGGATAAAATCAATGTGGATAAGGCCGTGGAGTACATAGTGAG
TTGCAAAAATCTGGATGGTGGATTTGGATGCACTCCTGGTGGAGAATCTC
ATTCAGGGCAAATCTTCTGTTGTGTTGGTGCACTTGCTATTGCCNGGGCT
CTGCATCATGTTGACAAGGACCTTCTTGGCTGGGTGGGTATGTGAGCGAC
AAGTCAAATCTGGAGGTCTTTATGGCCGCCCTGAGAAACTTCCTGATGTT
TGCTACTCCTGGTGGGTTCTTTCAAGCTTGGTCATGATTGACAAAGTCCA
CTGGATCAATAAGGGACAACTTGTTAAGTTTCTCTTGGAATGGTCGGGAA
TGGAAAATGGGAGAAATTTCAAAAAAACCTGAAAAAAGCGTTTAAAGTTT
TCTCAAAATAATTTTGAAAAAAACGGAGACTCCCCCTTTTTTGAAAATCC
AGAAAGGGAAAAAAAATTGATCCAACCCCAAGGCTTTTCGCCGGTGGAGG
GGTGA
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