DY263081

Overview
NameDY263081
Unique NameDY263081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1278
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2395 contig Ccv1_Contig2395:1..1278. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Neurospora crassa GN=B9J10.140 PE=3 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 2.310e-126
Identity = 243/367 (66.21%), Postives = 285/367 (77.66%), Query Frame = 1
Query:   97 PLMRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLAHNGH*SAPRGPRQPTS-SNVGRGCYTRSYQAGV*TGLPPTPRVTAIFCQTSLGGYAPFCHAFG*GVSNSGFVKEKKKPL 1194
            P +  QQRR L+IHEY SA LL  YGIGVPKG VA +GAEAE IAK IGGED VIKAQVLAGGRGKGTFDNG KGGVRV+YSP EA + A+QMIGHKLITKQTGA GRLC++V+I +RKFARREFYLA+LMDRASQGPVIV+SSQGGMDIE VAKE+PEAI TT IDI+ GVTD++AR+IAT+LGFSEQC+E+AKDTIQKLYK+F EKDATQIEINPLSET+DH+V+AMDAK  FDDNADFRQ ++F  RD TQEDP+EV+ A+ GLNFIKLD DIGCLVNGAGL +A         G  QP +  +VG G    + +      +   P+VTAIF   ++ G    C A   G+ N+    + K P+
Sbjct:   27 PSVSQQQRRALSIHEYLSADLLRQYGIGVPKGDVARTGAEAEAIAKQIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFSEQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADFRQPDIFKLRDTTQEDPDEVRAAQAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGG--QPANFLDVGGGATPAAIREAF-ELITSDPKVTAIF--VNIFGGIVRCDAIAHGLINTVKSLDLKIPI 388          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC1620.08 PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 2.135e-97
Identity = 172/282 (60.99%), Postives = 213/282 (75.53%), Query Frame = 1
Query:  115 QRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            Q+R LA+HEY S  +L  +G+ VP+G  A SG EAEK+A+D+   D V+KAQVLAGGRGKG FD+G +GGVR VY   EA + A+QMIGHKLIT+QTG AG++CN V++ +RKF R+E+Y AILMDR +Q P+IVAS QGG+DIETVA E+P AII   +     +   IA  +  +LGFS      A D I KLYKVF + DATQ+EINPL+ETTDH+VL MDAKLNFDDNA+FR   +F  RDI+QEDP+E + AKVGLNFIKLD +IGCLVNGAGL +A
Sbjct:   19 QKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDLKVTDLVVKAQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGFSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSNIFVLRDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMA 300          

HSP 2 Score: 32.7278 bits (73), Expect = 2.135e-97
Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGF 1057
            G  + TMDI +LHGG  +     +GG A  EAIR+ F
Sbjct:  296 GLAMATMDIIKLHGGEPANF-LDVGGNANAEAIREAF 331          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB1_MACFA (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 3.076e-90
Identity = 157/286 (54.90%), Postives = 211/286 (73.78%), Query Frame = 1
Query:  103 MRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            ++ QQ+R L++HEY S  LL+  G+ +PKG VA S  EA  +AK +G +D VIKAQVLAGGRGKGTF++G KGGV++V+SP EA  ++ QMIG KL TKQTG  GR+CN V + +RK+ RRE+Y AI M+R+ QGPV++ SSQGG++IE VA E PEAIIT PIDI +G+  + A  +A ++GF    +E A + + KLY +F++ DAT IEINP+ E +D  VL MDAK+NFD N+ +RQK++FD +D TQED  +   A+  LN+I LD +IGCLVNGAGL +A
Sbjct:   45 VQQQQQRNLSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMA 330          

HSP 2 Score: 30.0314 bits (66), Expect = 3.076e-90
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI +LHGG  +     +GGGAT   + + F+
Sbjct:  326 GLAMATMDIIKLHGGTPANF-LDVGGGATVHQVTEAFK 362          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3)

HSP 1 Score: 323.553 bits (828), Expect = 8.907e-90
Identity = 158/286 (55.24%), Postives = 209/286 (73.08%), Query Frame = 1
Query:  103 MRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            ++ QQ+R L++HEY S  LL+  G+ VPKG VA S  EA  IAK +G +D VIKAQVLAGGRGKGTF++G KGGV++V+SP EA  ++ QMIG KL TKQTG  GR+CN V + +RK+ RRE+Y AI M+R+ QGPV++ SS GG++IE VA E PEAII  PIDI +G+  + A  +A ++GF    +E A + + KLY +F++ DAT IEINP+ E +D  VL MDAK+NFD N+ +RQK++FD +D TQED  +   AK  LN+I LD +IGCLVNGAGL +A
Sbjct:   45 VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMA 330          

HSP 2 Score: 30.0314 bits (66), Expect = 8.907e-90
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI +LHGG  +     +GGGAT   + + F+
Sbjct:  326 GLAMATMDIIKLHGGTPANF-LDVGGGATVHQVTEAFK 362          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB1_PIG (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.749e-89
Identity = 154/286 (53.85%), Postives = 210/286 (73.43%), Query Frame = 1
Query:  103 MRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            ++ QQ+R L++HEY S  LL+  G+ +PKG VA S  EA  IAK +G +D VIKAQVLAGGRGKGTF++G KGGV++V+SP EA  ++ QMIG KL TKQTG  GR+CN V + +R++ RRE+Y AI M+R+ QGPV++ SSQGG++IE VA E PEAI+  PIDI +G+  + A  +A ++GF    ++ A + + KLY +F++ DAT +EINP+ E +D  VL MDAK+NFD N+ +RQK++FD +D TQED  +   AK  LN+I LD +IGCLVNGAGL +A
Sbjct:    7 IQQQQQRNLSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPPSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMA 292          

HSP 2 Score: 30.0314 bits (66), Expect = 9.749e-89
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI +LHGG  +     +GGGAT   + + F+
Sbjct:  288 GLAMATMDIIKLHGGTPANF-LDVGGGATVHQVTEAFK 324          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB_NEOFR (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Neocallimastix frontalis GN=SCSB PE=2 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 1.464e-88
Identity = 157/288 (54.51%), Postives = 217/288 (75.35%), Query Frame = 1
Query:  100 LMRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKG-AKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + ++ Q+R L++HEY S  LL  Y +  PKG VA +  EA + AK +  ED VIKAQVLAGGRGKG FD+G +GGV++ Y+P +    A +M+GHKLITKQTGAAGR CN+V++V+R++A RE+Y AIL+DRA++GPV+VASS+GG++IE VAK +P+AI+T P  I  G+T ++A + A ++GF+E+C+  A DT  KLYK+F+EKDAT +EINP++E    +V+ MDAK  FDDNA ++ K +F  RD TQEDP EV G AK  LN++ ++ +IGCLVNGAGL +A
Sbjct:   19 IAQTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKLNTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVALDTAKKMGFTEKCVPQAADTFMKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKPKGIFALRDTTQEDPREVAGHAKWNLNYVGMEGNIGCLVNGAGLAMA 306          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 1.658e-88
Identity = 153/286 (53.50%), Postives = 211/286 (73.78%), Query Frame = 1
Query:  103 MRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            ++ QQ+R L++HEY S  LL+  G+ VPKG VA S  EA  IAK +G +D VIKAQVLAGGRGKGTF +G KGGV++V+SP EA  ++ QMIG KLITKQTG  GR+CN V + +RK+ RRE+Y AI M+R+ QGPV++ S+QGG++IE VA E+PEAI+  PIDI +G+  + A  +A ++GF    ++ A + + KLY +F++ DAT +EINP+ E +D +VL MDAK+NFD N+ +RQK++FD +D +QED  + + A   +N+I LD  IGCLVNGAGL +A
Sbjct:   45 VQQQQQRTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIFDLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMA 330          

HSP 2 Score: 30.8018 bits (68), Expect = 1.658e-88
Identity = 15/38 (39.47%), Postives = 23/38 (60.53%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI +LHGG  +     +GGGAT + + + F+
Sbjct:  326 GLAMATMDIIKLHGGTPANF-LDVGGGATVQQVTEAFK 362          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.366e-87
Identity = 153/286 (53.50%), Postives = 208/286 (72.73%), Query Frame = 1
Query:  103 MRSQQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            ++ QQ+R L++HEY S  LL+  G+ +PKG VA S  EA  IAK +G +D VIKAQVLAGGRGKGTF++G KGGV++V+SP EA  ++ QMIG KL TKQTG  GR+CN V + +R++ RRE+Y AI M+R+ QGPV++ SS GG++IE VA E PEAI+  PIDI +G+  + A  +A ++GF    ++ A + + KLY  F++ DAT +EINP+ E +D  VL MDAK+NFD N+ +RQK++FD +D TQED  +   AK  LN+I LD +IGCLVNGAGL +A
Sbjct:   45 IQHQQQRNLSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMA 330          

HSP 2 Score: 30.0314 bits (66), Expect = 2.366e-87
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI +LHGG  +     +GGGAT   + + F+
Sbjct:  326 GLAMATMDIIKLHGGTPANF-LDVGGGATVHQVTEAFK 362          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB_YEAST (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=LSC2 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 9.775e-86
Identity = 151/286 (52.80%), Postives = 203/286 (70.98%), Query Frame = 1
Query:  112 QQRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSE---TTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            Q RR L+IHEYRSA LL  YGIG P+G  A +  EA + AK +     VIKAQ L GGRGKG FD G+K GV ++ SP++A  +A +M+ H LITKQTG AG+  ++V+IV R   + E YL+ILMDR ++ P+I+ASSQGGM+IE VA+  P+AI    I+  KG++  +A+++A  LGFS    ++A   +  LYK+FME+DATQ+EINPLSE      H+++  DAK  FDDNA FRQ++++ WRD++QEDP+EVK  K  LNF+KL  +IGCLVNGAGL +A
Sbjct:   26 QARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMA 311          

HSP 2 Score: 38.1206 bits (87), Expect = 9.775e-86
Identity = 19/38 (50.00%), Postives = 25/38 (65.79%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD+ +L+GG  +      GGGATPE I+QGFE
Sbjct:  307 GLAMATMDVIKLNGGDPANF-LDCGGGATPETIKQGFE 343          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCB1_DICDI (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsC PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 4.269e-80
Identity = 149/282 (52.84%), Postives = 202/282 (71.63%), Query Frame = 1
Query:  115 QRRGLAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            Q+R L +HEY++  +++SYGI  P G VA +  EAEKIA+ +  +D V+KAQVLAGGRGKG F +G KGGV++  S  +    A +M+GH L+TKQTG  G++ + V++ +R F R+E Y AILMDR + GPV+VAS +GG+DIE VA+++P AI   PIDI  GV  +  + +A +LGFS++ I  A+D ++KLY  F++ D T +EINPL+ET    VL MDAKLNFDDNA FR  ++F  RD +QEDP EVK A+  LN+I LD +IGCLVNGAGL +A
Sbjct:   31 QKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAEVMNTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFRHPDIFKLRDKSQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMA 312          
The following BLAST results are available for this feature:
BLAST of DY263081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUCB_NEUCR2.310e-12666.21Probable succinyl-CoA ligase [GDP-forming] subunit... [more]
SUCB_SCHPO2.135e-9760.99Probable succinyl-CoA ligase [GDP-forming] subunit... [more]
SUCB1_MACFA3.076e-9054.90Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]
SUCB1_HUMAN8.907e-9055.24Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]
SUCB1_PIG9.749e-8953.85Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]
SUCB_NEOFR1.464e-8854.51Succinyl-CoA ligase [GDP-forming] subunit beta, hy... [more]
SUCB1_MOUSE1.658e-8853.50Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]
SUCB1_BOVIN2.366e-8753.50Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]
SUCB_YEAST9.775e-8652.80Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]
SUCB1_DICDI4.269e-8052.84Succinyl-CoA ligase [ADP-forming] subunit beta, mi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DA11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263081 ID=DY263081; Name=DY263081; organism=Citrus clementina; type=EST; length=1278bp
CGATATACCCCGACGTGTGTCTGCCGCTCAGACATCATGTACAACTTTGC
CCGCGCCCGGCCGCTGGCTCGCGCTGTTCGCGCTGCTGCTGAGACACCAC
TGATGCGCTCCCAGCAAAGGAGAGGGCTCGCCATCCACGAATACAGGTCC
GCTGCCCTGCTCGAGTCGTATGGCATCGGCGTGCCCAAGGGTGGTGTCGC
TACCAGCGGCGCCGAGGCAGAGAAGATTGCCAAGGACATTGGCGGAGAGG
ACGCCGTGATCAAGGCCCAGGTTCTTGCTGGAGGTCGTGGAAAGGGCACC
TTTGACAATGGCTTCAAGGGCGGTGTCAGAGTCGTCTACTCTCCCCGCGA
AGCCTCCATCCTCGCCGACCAGATGATCGGCCACAAGCTCATCACCAAGC
AAACGGGAGCCGCCGGCCGGCTCTGCAACTCCGTCTTCATTGTCGACCGC
AAGTTTGCCCGCCGCGAGTTCTACCTCGCTATCCTCATGGACCGCGCGTC
ACAAGGCCCCGTCATTGTCGCTTCGTCGCAAGGAGGCATGGACATTGAGA
CAGTCGCAAAGGAGCACCCAGAGGCTATCATCACCACCCCGATCGACATC
CACAAGGGCGTCACCGACGACATTGCCCGCAACATCGCAACCGAACTCGG
CTTCTCCGAGCAGTGCATCGAGGACGCCAAGGACACCATCCAGAAGCTGT
ACAAGGTCTTCATGGAGAAGGACGCCACCCAGATTGAAATCAACCCCCTC
TCTGAGACCACCGACCACCAGGTCCTCGCCATGGACGCCAAGCTCAACTT
TGACGACAACGCCGATTTCCGCCAGAAGGAGGTTTTCGACTGGCGCGACA
TCACCCAGGAAGACCCCGAGGAAGTCAAGGGCGCTAAAGTCGGTCTCAAC
TTCATCAAGCTCGACCGTGACATTGGCTGCCTCGTCAACGGAGCCGGGCT
CCCCCTTGCCCACAATGGACATTAATCAGCTCCACGGGGGCCGCGCCAGC
CAACTTCCTCGAACGTTGGGCGGGGGTGCTACACCCGAAGCTATCAGGCA
GGGGTTTGAACCGGATTACCACCGACCCCCAGGGTTACGGCCATCTTTTG
TCAAACTTCTTTGGGGGGGTATGCTCCCTTTTGCCATGCTTTTGGCTAAG
GGGTTTCGAATTCCGGGTTTGTCAAAGAGAAAAAAAAACCCCTCCAAAAA
TCTCCGGGGTTATTACTCTCGGGGGTTTTAAAGGGGGGAACAATAAAAAA
AGGGGGAGAGGGGGGCTTCCTCCCCCCA
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