DY263115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 1.397e-80 Identity = 150/212 (70.75%), Postives = 169/212 (79.72%), Query Frame = 1 Query: 268 LINRFLRRGFCTA-VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 900 +++R RR +CT+ V RPWLF+GLGNPGDKYKGTRHN+GFEMID FAES GI MN V+ KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGV KSVMN+FRGNREFARLRIGIG+PPGQMDPKAFLLQKF+ ARER+D AL EGV+ LKL+L+K ES R FN QKYKH++ Sbjct: 1 MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 3.133e-56 Identity = 103/196 (52.55%), Postives = 137/196 (69.90%), Query Frame = 1 Query: 316 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 903 PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GV ++V+ + G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QKYK R+ Sbjct: 61 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 5.909e-55 Identity = 102/192 (53.12%), Postives = 130/192 (67.71%), Query Frame = 1 Query: 316 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 891 PWL VGLGNPG+KY GTRHNVGFEMID A +G+ MNT+ KA G G + D P+LLAKPQTYMN SGES G LA++Y++PL +L+ +D+M LP GV KSVM + G R F RL IGIG+PPG MD KAFLLQKF+ + +++I+ AL++G E +K L+ G + FN +QKYK Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 2.245e-54 Identity = 98/187 (52.41%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 316 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 876 PWL VGLGNPG KY+GTRHNVGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LAKPQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G +S+++ +G+R+F RLRIGIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G +SA NT Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNT 280
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.830e-54 Identity = 101/192 (52.60%), Postives = 132/192 (68.75%), Query Frame = 1 Query: 316 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 891 PWL GLGNPG KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVLL KPQ+Y+N SGE+ GPLAAYY++PL +LV +D+M LP GV ++VM +RE RL IGIG PPG+MD +AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QKYK Sbjct: 64 PWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYK 255
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.455e-53 Identity = 104/192 (54.17%), Postives = 129/192 (67.19%), Query Frame = 1 Query: 316 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 891 PWL VGLGNPG KY GTRHN+GFEMID A + ISMNT+ KA G G VG+ P+LL KPQ YMN SGES GPLAAYY++PL +L+ +DDMGL GV K+V + G R + RL IGIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G ++S FN QKYK Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 242
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.901e-53 Identity = 97/190 (51.05%), Postives = 135/190 (71.05%), Query Frame = 1 Query: 313 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 882 +PWLFVGLGNPG Y+GTRHNVGFEMID AE++GIS++++ KA G+G +GDAP++LAKPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP +S++N+ + NR+F RLRIGIGRPPG+MDP F+L+ FN +E +D A G+E ++++ +G +SA + NT Q Sbjct: 54 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQ 243
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0347800 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.753e-39 Identity = 78/103 (75.73%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 304 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 612 +V PWLFVGLGNPG+KY+ TRHNVGF+MID FA+SQGIS+ KA FG+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGV Sbjct: 56 SVINPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGV 158
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_THEFY (Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) GN=pth PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 3.727e-33 Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 1 Query: 319 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 858 WL VGLGNPG KY G RHNVGF ++D A +G A + VGDAPV+LAKP +YMNLSG L+A+YK+P++R++V HD++ +P +S+ + G+ ++ R+R+GIGRPPG+MD +F+LQ F+ R+ +D + + ++ +++ GL ++ Sbjct: 35 WLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKPASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASL-GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_CHLAD (Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pth PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.045e-31 Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 319 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 879 WL VGLGNPG++Y TRHN+GF ++ AE G++ K+ +G + V L KPQTYMNLSG++ L +YK+ P +LV +DD+ LP +S++ G EF RLRIGIG+PPGQMD ++L +F + L + +++++S+GLT + +N + Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKPQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQL-GTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAAMNRYNPL 188 The following BLAST results are available for this feature:
BLAST of DY263115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263115 ID=DY263115; Name=DY263115; organism=Citrus clementina; type=EST; length=1228bpback to top |