DY263222

Overview
NameDY263222
Unique NameDY263222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1338
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: ATB15_ARATH (Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 9.001e-28
Identity = 58/78 (74.36%), Postives = 64/78 (82.05%), Query Frame = 1
Query:  757 MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:    1 MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 78          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: ATHB8_ARATH (Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana GN=ATHB-8 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.066e-20
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query:  790 SLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            ++DNGKYVRYTPEQVEALERLY++CP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:   10 NMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 76          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: ATB14_ARATH (Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana GN=ATHB-14 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 5.289e-20
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  763 MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            M  ++     LD+GKYVRYTPEQVEALER+Y ECP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:   11 MMNRESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 86          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSJ (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. japonica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.178e-19
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  778 GKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            G    +D GKYVRYTPEQVEALER+Y ECP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:   23 GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 93          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSI (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.178e-19
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  778 GKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            G    +D GKYVRYTPEQVEALER+Y ECP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:   23 GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 93          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX33_ORYSJ (Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. japonica GN=HOX33 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.010e-19
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 1
Query:  754 KMAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +++ S        +D GKYVRYTPEQVEALER+Y ECP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:   12 RLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 90          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX33_ORYSI (Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica GN=HOX33 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.010e-19
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 1
Query:  754 KMAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +++ S        +D GKYVRYTPEQVEALER+Y ECP+PSS RRQQLI+ECPILSN EPKQ K   QN   +  + K+
Sbjct:   12 RLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 90          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: ATBH9_ARATH (Homeobox-leucine zipper protein ATHB-9 OS=Arabidopsis thaliana GN=ATHB-9 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.625e-19
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 1
Query:  760 AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +M  +D      D+GKYVRYTPEQVEALER+Y ECP+PSS RRQQLI+ECPIL N EP+Q K   QN   +  + K+
Sbjct:    6 SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKE 82          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSJ (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. japonica GN=HOX10 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.303e-18
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  757 MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CP+P+S RRQQL++ECPIL+N EPKQ K   QN   +  + K+
Sbjct:    7 MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKE 88          
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSI (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica GN=HOX10 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.303e-18
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  757 MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CP+P+S RRQQL++ECPIL+N EPKQ K   QN   +  + K+
Sbjct:    7 MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKE 88          
The following BLAST results are available for this feature:
BLAST of DY263222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ATB15_ARATH9.001e-2874.36Homeobox-leucine zipper protein ATHB-15 OS=Arabido... [more]
ATHB8_ARATH1.066e-2068.66Homeobox-leucine zipper protein ATHB-8 OS=Arabidop... [more]
ATB14_ARATH5.289e-2061.84Homeobox-leucine zipper protein ATHB-14 OS=Arabido... [more]
HOX32_ORYSJ1.178e-1964.79Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX32_ORYSI1.178e-1964.79Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX33_ORYSJ2.010e-1958.23Homeobox-leucine zipper protein HOX33 OS=Oryza sat... [more]
HOX33_ORYSI2.010e-1958.23Homeobox-leucine zipper protein HOX33 OS=Oryza sat... [more]
ATBH9_ARATH2.625e-1958.44Homeobox-leucine zipper protein ATHB-9 OS=Arabidop... [more]
HOX10_ORYSJ1.303e-1856.10Homeobox-leucine zipper protein HOX10 OS=Oryza sat... [more]
HOX10_ORYSI1.303e-1856.10Homeobox-leucine zipper protein HOX10 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11AF06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263222 ID=DY263222; Name=DY263222; organism=Citrus clementina; type=EST; length=1338bp
TCGATGAACCATCGAATCACTGGAAACGTCTGGTTCCAAGCGTTTTTATG
TTTTTGGGGGGTTTTCCTTCTGGAGTCGGAGAACCGGCTGAGTGGAATCG
GTGATTGAAACAAGACAACTCTTTGGCGCGAAACGTTTCGTCGGGGCTGC
TTGTTTTTTCGTGCTTTGGAAAACGCTGGAAATGTTTTTCTGAAACAGAT
CGTTGGGTATTGAGAGCTCTGATCTCGAAAGATTTATGCTTTATTGTGTT
TGGGGCTGTCTCATAGTAACAAAACAAGAATAACTGCGTACAAAATCAGG
ATATTCTTGTCTCTTGTCGGTTATCTCTATCCTTAAATCACTCAGTTAGC
ATTAAACAATACATGAGTTTGAAAATCTTACACTTAATTTATGGTATATA
TGCATTTTGGTTAAATCCCATTTGTGTTTGTTCGGTGCTTTTGAGCTTTG
CAGTGTCTGGATGAAGTATAAGTGCTGCAGTTTAGTTTAGTATAGTTTGT
GCTTGGCTTTTTGGTATTTTGAAGAGTACTTAGTGTTTCAGATTGTGTTT
CAAAGAAGATAAAGCACTTGAATAAGAGCTTCCAAAGCTTGTAAACTTGT
GGTTGGGTTTAGTATTTGGTAGATAATGTTTGTTTGAGGTTCACATTTGG
GTTTTTAATGCTTTAGATTTCAAAGAGAATAATTGAAATCGTGACAACAG
AAGAGCGGCTGCTTGTTGTCTGTGTGACCTTGTGAAGTTTGGTGGTGAAA
TTGAAGATGGCAATGTCCTGCAAGGATGGTAAGACTGGGAGCTTGGATAA
CGGCAAGTATGTAAGATACACACCTGAGCAGGTTGAGGCTCTTGAGAGGC
TCTATCATGAATGCCCCCAACCCAGTTCATTTCGCCGCCAACAGCTAATT
AAGGAGTGCCCAATTCTCTCTAACTTTGAGCCAAAGCAAACAAAATTTGG
GTCCCAAAACGAAGAAGCCAAGAGAAGCAGAGGGAAAAAACTTCCCGTCT
TTAACTGGGGAAATAAAACCTGAAAGCGATAAACAAGCTTTTGTAGGAGG
AAAATGAAAGGTTGCAAAACCCGGGGCCACGCTGGGGTAAGAAAAGGGAA
ACTTTCCCCAAAATACCAAAAAACACACCTTTGGCCCCAAAAATCAAACC
GGGGAATGGTGGGGGGACCGGGGGGCACCCCCTTTTAACCCTCCCATCCT
TCCCGGGGGAGGGCTTACCCGGGGGGGGGTTTTGTTTCCTTTTGGAAAAA
AAAATTTATTAAAAAATTTTTTTTTTTAAAGGGCCCCCCGGGAAAATCGG
CGTTGTGTGAGAGGGGGGGCCTCACAAAAACCCTCCGG
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