DY263224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.525e-24 Identity = 61/91 (67.03%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +A +YTSIKPLGDRVLVKIK EEKT GGI LPSTAQ+KPQ EVVAVG G KN +DI+V G Q+IYSKYAG FN KH LKE Sbjct: 55 VAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKE 145
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.478e-19 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 794 QYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +YTS+KPLGDRVL+K K VEEKT GIFLP+ AQ KPQ+ EVVA+G G+ L ++VK G +V+YSKY G +G H +KE Sbjct: 60 KYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKE 147
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.390e-15 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ VK+ EEKT GGI LP AQ KPQ EVVAVG R +D ++ LD VK G +V+YSKYAG +G + L E Sbjct: 4 ISINVSTVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELD--VKVGDKVLYSKYAGTDVKLSGEDYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.431e-14 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*L-DISVKPGTQVIYSKYAG 1012 +A+ +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ EVVAVG G+ + + L + +K G +V+YSKYAG Sbjct: 4 VALNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.431e-14 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +IKPLGDRV++K +EEKT GI +P TA+ KPQ EVVAVG G+ + + VK G +VIYSKYAG ++G ++ LKE Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.431e-14 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +IKPLGDRV++K +EEKT GI +P TA+ KPQ EVVAVG G+ + + VK G +VIYSKYAG ++G ++ LKE Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.869e-14 Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EVVAVG R +D ++ I VK G +V+YSKYAG G + L E Sbjct: 4 ISINVSTVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRS--PIEVKVGDKVLYSKYAGTDIKLGGEDYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_MICAN (10 kDa chaperonin OS=Microcystis aeruginosa (strain NIES-843) GN=groS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.441e-14 Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ T++KPLGDRV VK+ EEKT GGIFLP A+ KPQ EVVAVG R +D + +++ V G +V+YSKYAG G + L E Sbjct: 4 VSINVTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGV--GDKVLYSKYAGTDIKLGGEEFVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.188e-14 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ EVVAVG GE +++ VK G +VI+SKYAG +G ++ L+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.164e-14 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP +A+ KPQ EVVAVG G +D ++ +D VK G +V+YSKYAG +G + L E Sbjct: 4 ISINVSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVD--VKVGDKVLYSKYAGTDIKLSGDDYVLLSE 95 The following BLAST results are available for this feature:
BLAST of DY263224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263224 ID=DY263224; Name=DY263224; organism=Citrus clementina; type=EST; length=1301bpback to top |