DY263226

Overview
NameDY263226
Unique NameDY263226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1226
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2421 contig Ccv1_Contig2421:1..1226. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of DY263226 vs. ExPASy Swiss-Prot
Match: YXJH_BACSU (Uncharacterized protein yxjH OS=Bacillus subtilis GN=yxjH PE=4 SV=4)

HSP 1 Score: 150.599 bits (379), Expect = 9.580e-36
Identity = 90/303 (29.70%), Postives = 153/303 (50.50%), Query Frame = 2
Query:   14 RLPFHAEHIGSLLRPADLQEAKTKAANKQSSDSELEAAEHKAITHIVKRQQEEGVRPICSGEYDRKVYXXXXXXXXXXXXXXXDAPWDLYRLSAPPIAALKKAGLKYPMTVVCNGKIEYKHSPYLKKWEYLKSQVPESQWDQCKFTMPPAPYFHLRLAPGKCYPKEVYPTDAAFFADLAEAYKKEFKVLHEAGLKSVQIDDPTLAYFCSKDMLEGLKSDGVDPDELFDLYCKAHNDCLEGRPEGLHVGLHICRGNFSKSMHFSQGSYEQIAERFFKSLNYDTFYLEYDDARSGGFEPLRFLPK 922
            + PF A+H+GSLLR   ++EA+ K A  + +  +L   E++ IT IV++Q+E G+  +  GE+ R  +                A    +  +     ++K             GK+++   P L  +++L  ++  +   +     P   +F      G+   K +Y     +F D+A+AYKK  K  ++AG + +Q+DD + + F      E +++ G DP+ L  ++ K  ND +  RP+ L + +HICRGNF +S   + G Y+ +AE     LN D  +LEYDD RSG F+PLRF+ +
Sbjct:   17 KAPFRADHVGSLLRSVPVKEARQKKAAGEMTAEQLRDIENQEITRIVEKQKEIGLDVVTDGEFRRSWWHYDFLEGLDGVEPFIPAEGIQFHNTKTKARSIK-----------VTGKLDFTSHPALGDYQFL-HEIAGNATPKLTIPSPNMLFF------GEKADKGIYDDQEEYFHDMAQAYKKAIKAFYDAGCRYLQLDDTSWSLFFEDKGREVVRALGGDPETLPAIFAKTINDAVADRPDDLTITMHICRGNF-RSTWAASGGYDAVAETILDGLNLDGLFLEYDDDRSGNFDPLRFVKR 300          

HSP 2 Score: 22.3274 bits (46), Expect = 9.580e-36
Identity = 8/28 (28.57%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  919 QDKNVVLGVVSTRLPNLGMPKT*RRRVS 1002
            +D  +VLG+++++   L  P+  +RR++
Sbjct:  301 KDLQIVLGLITSKYGELENPEDVKRRIN 328          
BLAST of DY263226 vs. ExPASy Swiss-Prot
Match: YXJG_BACSU (Uncharacterized protein yxjG OS=Bacillus subtilis GN=yxjG PE=4 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 1.155e-34
Identity = 96/303 (31.68%), Postives = 154/303 (50.83%), Query Frame = 2
Query:   20 PFHAEHIGSLLRPADLQEAKTKAANKQSSDSELEAAEHKAITHIVKRQQEEGVRPICSGEYDRKVYXXXXXXXXXXXXXXXDAPWDLYRLSAPPIAALKKAGLKYPMTVVCNGKIEYKHSPYLKKWEYLKSQVPESQWDQCKFTMPPAPYFHLRLAPGKCYPKEVYPTDAAFFA-DLAEAYKKEFKVLHEAGLKSVQIDDPTLAYFCSKDMLEGLKSDGVDPDELFDLYCKAHNDCLEGRPEGLHVGLHICRGNFSKSMHFSQGSYEQIAERFFKSLNYDTFYLEYDDARSGGFEPLRFLPKT 925
            PF A+ +GSLLR   +++A+ + A  + +  +L   E+  I  IV++Q+E G+  +  GE+ R  +                     +          K  G+K        G I++   P L+ + +L S   ++     K T+P       R   GK   K+ Y  D   F  D+++AYKK  +  ++ G + +Q+DD   A F S+  L+ +++ G  PDEL  L+ K+ ND +  RP+ L V +HICRGNF +S   ++G Y+  AE  F  LN D  +LEYDD+RSGGFEPLR++ ++
Sbjct:   19 PFRADQVGSLLRSEPVKKARLQKAAGEMTAEQLRQIENDEIIRIVEKQKETGLNVVTDGEFRRAWWHFDFLENLDGVEPFTPEQGIQFHN-----VQTKARGIKV------TGDIDFSTHPMLEDYSFLHSIAGDAT---PKMTIPSPNMLFFR---GKL-EKDEYKNDYQLFQHDVSKAYKKAIQAFYDRGCRYLQLDDTAWAVFLSEKGLKQIEAFGTTPDELRQLFAKSINDAIADRPDDLTVTMHICRGNF-QSTWTAEGGYDAAAETIFDGLNLDGLFLEYDDSRSGGFEPLRYVKRS 302          
The following BLAST results are available for this feature:
BLAST of DY263226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YXJH_BACSU9.580e-3629.70Uncharacterized protein yxjH OS=Bacillus subtilis ... [more]
YXJG_BACSU1.155e-3431.68Uncharacterized protein yxjG OS=Bacillus subtilis ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11AF10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263226 ID=DY263226; Name=DY263226; organism=Citrus clementina; type=EST; length=1226bp
CGCAATCATGGTCAGACTTCCCTTCCACGCCGAGCACATTGGCTCGCTCC
TCCGCCCTGCCGACTTGCAGGAGGCCAAGACCAAGGCCGCCAACAAGCAG
TCCTCAGACTCCGAGCTCGAGGCTGCTGAGCACAAGGCCATCACTCACAT
TGTCAAGCGCCAGCAAGAGGAGGGTGTTCGCCCCATCTGCTCAGGCGAGT
ATGATCGCAAGGTCTACTTTGGTGGTTTCTTCGAGGAGCTTGAGGGCTTC
GAGGAGGTCGAGGACGCACCCTGGGACCTTTACAGACTCTCCGCTCCCCC
AATTGCTGCCCTGAAGAAGGCCGGCCTCAAGTACCCCATGACTGTCGTCT
GCAACGGCAAGATTGAGTACAAGCACAGCCCTTACCTCAAGAAGTGGGAG
TACCTCAAGTCGCAGGTCCCCGAGTCGCAGTGGGACCAGTGCAAGTTCAC
CATGCCCCCGGCTCCCTACTTCCACCTTCGTCTTGCTCCCGGCAAGTGCT
ATCCCAAGGAGGTCTACCCTACCGATGCCGCTTTCTTCGCCGACTTGGCT
GAGGCCTACAAGAAGGAGTTCAAGGTCCTGCACGAGGCTGGCTTGAAGAG
CGTCCAGATCGACGACCCTACTCTTGCCTACTTCTGCTCCAAGGACATGC
TTGAGGGTCTCAAGTCCGACGGTGTTGACCCCGACGAGCTGTTCGACCTC
TACTGCAAGGCTCACAACGACTGTCTTGAGGGCCGCCCCGAGGGTCTCCA
CGTTGGTCTCCACATCTGCAGAGGTAACTTCTCCAAGTCCATGCACTTCT
CCCAGGGCTCGTACGAGCAGATCGCCGAGAGATTCTTCAAGTCGCTCAAC
TACGACACCTTCTACCTCGAGTACGATGATGCCCGCAGCGGTGGCTTCGA
GCCCCTCCGTTTCCTCCCCAAGACAAGAACGTCGTTCTCGGTGTCGTCAG
CACAAGGTTGCCCAACCTTGGGATGCCAAAGACATGAAGGAGAAGGGTCT
CGAGGGCCCCGACATCATCGCCAGGGGCCAGGGGGGCACCCGGGAGCAGG
CCTGGGAATGGATCGGGTTCAGCCCTCCGGTGGGGTTTCGCCCGCCACGG
GGTTCGGGGCCAAAGCCCTTAACCAAAGGAAAAAATGGTCCCCAAACCCC
CACCCTGTCAAAGGCGGGTTGCTAAAAAGAACCCTGGGCCCCACCCGGGG
GCCAAAAACTTTATGGGGGGGGGAGA
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