DY263228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.637e-66 Identity = 137/239 (57.32%), Postives = 174/239 (72.80%), Query Frame = 3 Query: 96 QEYQNYWETKMFLQNEEFD---TWPLDEAFSGYYDXXXXXXXXXXXXXKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESG-KSKKNFGFDFEQELPVLLRPKK-KKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEEEMDDLKIKIQTAIQALNDPSSP 797 QE NYWE FLQNE+F+ +WPL+EA SG YD KNIVSERNRR+KLN+RLFALRSVVPNI+KMDKASIIKDAI YI+ L +EK++ EI ELES KS +F DF+++L V + KK K++D +GS T+ +E+LEL+V MGE+ +VVSVTC+KRTDTMVKLCE FESL LKI+T+N+T+ +G + T FIEADEEE + L++KI+T I A N+ SP Sbjct: 7 QELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLD-----SGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNETQSP 240
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: BH027_ARATH (Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.996e-49 Identity = 108/224 (48.21%), Postives = 143/224 (63.84%), Query Frame = 3 Query: 84 EDYQQEYQNYWETKMFLQNEE--FDTWPLDEAFSGYYDXXXXXXXXXXXXX-KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKS---------KKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIE 719 ED EY+NYWET MF QN+E FD+WP++EAFSG + KN+VSERNRR+KLN+RLFALRSVVPNISK+DKAS+IKD+IDY+QEL +QEK + EI ELES + NF Q+ + KK + S + P+E+LE++V MGEK +VV +TCSK+ +TMV+LC+ ESL L I+T N ++ RL T F++ Sbjct: 2 EDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 4.561e-18 Identity = 57/180 (31.67%), Postives = 95/180 (52.78%), Query Frame = 3 Query: 231 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI---MELESGKSKKNFGFDFEQELPVLLRP--------KKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEEEM 737 KN+++ER RRKKLN+RL+ALRS+VP I+K+D+ASI+ DAI+Y++EL + K ++DE+ E E G ++ G + P K D +++ + +E ++ V + + V V C + +L EA +SL L++ AN T + +E ++ EM Sbjct: 314 KNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEME-PQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNEM 492
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 9.510e-16 Identity = 60/185 (32.43%), Postives = 102/185 (55.14%), Query Frame = 3 Query: 234 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELH---EQEKRIRDEIMELESGKSKK-NFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEE--EMDDLKIKIQTAI 770 ++ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL +Q + ++EI + G SK+ N G R K++K S TA +E+ VK +G ++ + V C K+ + EA + L L++ A+++ V +++ A ++ + D LK+ + T + Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGS------RAKERK-----SSNQDSTASSIEMEIDVKIIGWDVM-IRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFNHDQLKVALMTKV 588
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.614e-15 Identity = 53/166 (31.93%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 234 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEI-LELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADE 728 ++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DA+ YI ELH + K +ME E ++ G+ S P+ + ++ V+T GE + V + C + ++ AFE K+++I +N+ +L T ++++E Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLK-----VMEAE----RERLGY-------------------------SSNPPISLDSDINVQTSGEDV-TVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSEE 564
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: SCRM2_ARATH (Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14 Identity = 58/180 (32.22%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 231 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEEEMDDLKIKIQTAI 770 KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL + RI D ELES + P + + S+ + + + V+ K + + + C +R ++ A ++L L + A I+ G L E +E+ D L +I+ + Sbjct: 267 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ---RINDLHTELESTPPSSS---SLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAVL 440
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: BH090_ARATH (Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.996e-14 Identity = 44/167 (26.35%), Postives = 92/167 (55.09%), Query Frame = 3 Query: 231 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEE 731 KN+ SER RR+++N+ ++ LR+VVP I+K++K I DA+DYI EL +++++ DE+ + + K+ +E + P+ +++ S ++ +++ V GE+ ++ V + D +L EA + +L+II N T + ++ ++A+++ Sbjct: 264 KNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEMECKEIAA----EEQSAIADPEAERV----SSKSNKRVKKNEVKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVDLCELEIIDVNFTRLDLTVMTVLNVKANKD 422
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.996e-14 Identity = 56/188 (29.79%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 234 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL---------HEQEKRIRDEIMELESGKSKKNFGFD--FEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEE--EMDDLKIKI 758 ++ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL ++E + + ++M E+G +K + QE VL+ +E+ VK +G + + + CSKR K EA + L L++ A+++ V +++ A ++ + D LK+ + Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIE----------------------MEVDVKIIGWDAM-IRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQDQLKVAL 581
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: FIT_ARATH (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.816e-14 Identity = 47/140 (33.57%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 231 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESL 650 + ++SER RR ++ ++L+ALRS+VPNI+KMDKASI+ DA+ Y+QEL Q K+++ +I LE+ + +++ P +K + R + S+ +I+++ V + EK V + C+K L ++ ESL Sbjct: 131 RTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTG---GYQEHAP---DAQKTQPFRGINPPASK----KIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESL 260
BLAST of DY263228 vs. ExPASy Swiss-Prot
Match: ICE1_ARATH (Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.901e-14 Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 231 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGK---SKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEADEEEMDDLKIKIQTAI 770 KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL ++ + +E+ G + +F + R K++ S + A VE V+ + + + + C +R ++ +A ++L L + A I+ G L E +E + L +I+ + Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVE-----VRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVL 484 The following BLAST results are available for this feature:
BLAST of DY263228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263228 ID=DY263228; Name=DY263228; organism=Citrus clementina; type=EST; length=1041bpback to top |