DY263238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_XENTR (Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 1.761e-99 Identity = 176/242 (72.73%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+PD RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPDTRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 1.761e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_XENLA (Cell differentiation protein RCD1 homolog OS=Xenopus laevis GN=rqcd1 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 1.761e-99 Identity = 176/242 (72.73%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+PD RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPDTRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 1.761e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_RAT (Cell differentiation protein RCD1 homolog OS=Rattus norvegicus GN=Rqcd1 PE=1 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 5.103e-99 Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 5.103e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_PONAB (Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2) HSP 1 Score: 355.91 bits (912), Expect = 5.103e-99 Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 5.103e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_MOUSE (Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 5.103e-99 Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 5.103e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_MACFA (Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 5.103e-99 Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 5.103e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_HUMAN (Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 5.103e-99 Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 5.103e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_BOVIN (Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 5.103e-99 Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+SFGTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASHP+TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D + L++D Sbjct: 28 ELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDD 269 HSP 2 Score: 25.409 bits (54), Expect = 5.103e-99 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 +TT+RWLAQL+ N+ +V Sbjct: 270 TTTKRWLAQLVKNLQEGQV 288
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_DANRE (Cell differentiation protein RCD1 homolog OS=Danio rerio GN=rqcd1 PE=2 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 1.772e-96 Identity = 172/242 (71.07%), Postives = 202/242 (83.47%), Query Frame = 3 Query: 189 DLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 +LS+P+ RENALLELSK +E DLAP +W+S GTIAAL+QEIV+IYP ++PP LT QSNRVCNALALLQCVASH +TR FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF V +LG MV L+++PS+RLLKH++RCYLRLSDN RA +ALR CLPD L+D + L++D Sbjct: 27 ELSSPETRENALLELSKKRESVTDLAPMLWHSCGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNSRAREALRQCLPDQLKDTTFAQVLKDD 268 HSP 2 Score: 26.5646 bits (57), Expect = 1.772e-96 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 914 STTRRWLAQLLHNVGVNRV 970 STT+RWLAQL+ N+ +V Sbjct: 269 STTKRWLAQLVKNLQEGQV 287
BLAST of DY263238 vs. ExPASy Swiss-Prot
Match: RCD1_SCHPO (Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe GN=rcd1 PE=2 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 1.559e-90 Identity = 166/244 (68.03%), Postives = 198/244 (81.15%), Query Frame = 3 Query: 183 VLDLSNPDLRENALLELSKNKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDAPLSSCLRED 914 ++ L + RE AL+ELS+ +E ++DLA +W+S+G + AL+QEI+S+YP+L+PP LT SNRVCNALALLQC+ASHP+TR+ FLNAHI L+LYPFLNT SKS+PFEYLRLTSLGVIGALVK D EVI+FLLSTEIIPLCLR ME GSELSKTVA FIVQK L DDVGL YIC T ERF+AV VL NMV L + + RLLKH+IRCYLRLSDNPRA +ALR CLP+ LRDA + L++D Sbjct: 18 IIQLVSGTSREQALVELSRKREQYEDLALILWHSYGVMTALLQEIISVYPLLNPPTLTGPTSNRVCNALALLQCIASHPETRIHFLNAHITLFLYPFLNTLSKSKPFEYLRLTSLGVIGALVKNDSPEVINFLLSTEIIPLCLRIMENGSELSKTVAIFIVQKFLCDDVGLQYICQTYERFYAVASVLNNMVMQLVDSFAFRLLKHVIRCYLRLSDNPRAREALRHCLPEPLRDATFAQVLKDD 261 The following BLAST results are available for this feature:
BLAST of DY263238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263238 ID=DY263238; Name=DY263238; organism=Citrus clementina; type=EST; length=1279bpback to top |