DY263320

Overview
NameDY263320
Unique NameDY263320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1044
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.197e-20
Identity = 77/255 (30.20%), Postives = 120/255 (47.06%), Query Frame = 2
Query:  134 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGAAI-ACVAFALYTKV 883
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G V + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W G  I A +A ALY  V
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSVALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALYEYV 251          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 2.197e-20
Identity = 76/255 (29.80%), Postives = 120/255 (47.06%), Query Frame = 2
Query:  134 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGAAI-ACVAFALYTKV 883
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I I   +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W G  I A +A  LY  V
Sbjct:   23 MVAFKGVWTQTFWKAVTAEFL--AMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLSAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGISVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.869e-20
Identity = 76/255 (29.80%), Postives = 120/255 (47.06%), Query Frame = 2
Query:  134 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGAAI-ACVAFALYTKV 883
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W G  I A +A ALY  V
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALYEYV 254          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.747e-20
Identity = 79/255 (30.98%), Postives = 117/255 (45.88%), Query Frame = 2
Query:  149 DIFSVKVW---RASMAELLGTAVLVFALDTIVI-----SSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGAAIACVAFALYTKVI 886
            D+  +++W   RA +AE + T + ++     VI     SS         L ++                ISGGHINP V+F   L    S  RA +YI+AQC+GGI G   +K +    + H ++  G        G   +V  G  T  AL  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR +G A++      WD HW+FWAG  I  +A A Y + I
Sbjct:   27 DVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGI----MKHQYNANG--------GGANMVASGYSTGTALGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYI 264          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 6.392e-20
Identity = 75/255 (29.41%), Postives = 120/255 (47.06%), Query Frame = 2
Query:  134 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGAAI-ACVAFALYTKV 883
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  + +V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W G  I A +A  LY  V
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTMV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.349e-20
Identity = 81/265 (30.57%), Postives = 113/265 (42.64%), Query Frame = 2
Query:  149 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGAAIACVAFALYTKVI 886
            ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HWVFW G  I     ALY  V+
Sbjct:   44 ELSSWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVV 276          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.349e-20
Identity = 81/265 (30.57%), Postives = 113/265 (42.64%), Query Frame = 2
Query:  149 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGAAIACVAFALYTKVI 886
            ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HWVFW G  I     ALY  V+
Sbjct:   44 ELSSWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVV 276          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 8.349e-20
Identity = 73/253 (28.85%), Postives = 117/253 (46.25%), Query Frame = 2
Query:  134 ILGFEDIFSVKVWRASMAELLGTAVLVF--ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGAAI-ACVAFALYTKV 883
            ++ F+ +++   W+A  AE L T + V      TI     +       +++S                ISGGHINP V+ A   T   S +++  YI+AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W  HW++W G  + A +A ALY  V
Sbjct:   23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.090e-19
Identity = 75/255 (29.41%), Postives = 119/255 (46.67%), Query Frame = 2
Query:  134 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGAAI-ACVAFALYTKV 883
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W G  I A +A  LY  V
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DY263320 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.424e-19
Identity = 85/279 (30.47%), Postives = 122/279 (43.73%), Query Frame = 2
Query:   83 AETDG*REEQNPSTWKKILGFE--DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGAAIACVAFALYTKVI 886
            A+TD   +E  P+ +     FE  ++ S   +RA +AE + T + ++    I + ++    + PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K    N      +LGG             V  G      L  EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HW+FW G  I     ALY +++
Sbjct:   25 AQTDKDYKEPPPAPF-----FEPGELSSWSFYRAGIAEFIATFLFLY----ITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQ---TLGGGA---------NTVAHGYTKGSGLGAEIIGTFVL----VYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLV 276          
The following BLAST results are available for this feature:
BLAST of DY263320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
AQP4_RAT2.197e-2030.20Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_BOVIN2.197e-2029.80Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP4_NOTAL2.869e-2029.80Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
PIP26_ORYSJ3.747e-2030.98Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
AQP4_HUMAN6.392e-2029.41Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
PIP11_VICFA8.349e-2030.57Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH8.349e-2030.57Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
AQP4_MOUSE8.349e-2028.85Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME1.090e-1929.41Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
PIP13_ARATH1.424e-1930.47Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11BG03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263320 ID=DY263320; Name=DY263320; organism=Citrus clementina; type=EST; length=1044bp
CCGCTAATTCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAAC
AGAGTCCAGCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGA
AGAGAAGAACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGA
CATTTTTTCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTA
CAGCAGTGCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAA
ACAGACACAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCAC
AATAACAATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCA
ACCCATTAGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCA
AGGGCAGCCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGC
ACTAGCGCTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCAC
TTGGAGGCTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTT
GAGATCGGCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTC
GTTTGTGTTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAG
CCAAGGCTCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTG
GGTCTTCTGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGC
CGGAGCTGGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAG
GAGGCCATCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGGCGGCTATC
GCTTGCGTGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTT
GCACACCATCAAGTGATGTAGCTTGAATTTCAATCACCCTATTGGCTTCT
AGGATTAATTGAAGGTGGTTCATGGTTTAAGGAATAAAAAAGTGGAATAT
CAATTGAAAATATATTTAATTGTCAATTAAAACTTCCTTTTAAT
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