DY263366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 6.818e-73 Identity = 155/309 (50.16%), Postives = 199/309 (64.40%), Query Frame = 1 Query: 151 FSILLELTASDDLDGFRKAIEEDG-HDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPILSSLGRMLGVVIPRSTIIPVSHVPDFEKVM*A-GGCL*ICHGIF-*WRXXXXXXXXXXXXRNNCNGRGGVFCPRPEK 1068 FS+LLE +A +DL GF+ +EE+G ID SGLWYGR +GS+KMGFEERTPLMIA++FGSK+VV Y+I +G VDVNR+CGSDG TALHCA SG SANS+E+V LLL SA+ +S DAYGN+P D+I + F++R KVL+ LLKG+ ++++ + Q + E + + E+S PR G+E+KEYPVD TLPDIKNG+YGTDEFRMY FK+KPCSRAYSHD P + G PR P+F K + G HGIF W NC+ R F +PE+ Sbjct: 11 FSLLLESSACNDLSGFKSLVEEEGLESIDGSGLWYGRRLGSKKMGFEERTPLMIAALFGSKEVVDYIISTGLVDVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPVFSARMKVLERLLKGN-----DDLNEVNGQEESEPEVEVEVEVSPPR----GSERKEYPVDPTLPDIKNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHP-GENARRRDPRKYHYSCVPCPEFRKGSCSRGDTCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAHKPEE 309
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 3.891e-69 Identity = 120/254 (47.24%), Postives = 166/254 (65.35%), Query Frame = 1 Query: 64 MCSGLKRKPTQTGFIMDTDSQKQDGLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHD 825 MCSG K + + + +S++++ +LLE A DDLD F++ +EE G D+DESGLWY R +GS+KMG EERTPLM+A+M+GS V+++++ +G DVNRACG + VT LHCA +G S N +EV+ +LL+ASA VNSVDA GN+P D+ + + R+K ++ LL+G G G L D+ V E+E +S +YP D +LPDI G+YG+DEFRMY+FKVKPCSRAYSHD Sbjct: 1 MCSGPKSNLCSSRTLTEIESRQKEE---ETMLLLEFAACDDLDSFKREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVLTFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFVRVSRFVASPRRKAVELLLRGGGVG------GLIDEAV----EEEIKIVS------------KYPADASLPDINEGVYGSDEFRMYSFKVKPCSRAYSHD 229 HSP 2 Score: 54.299 bits (129), Expect = 3.891e-69 Identity = 25/34 (73.53%), Postives = 26/34 (76.47%), Query Frame = 3 Query: 843 FVILGENARRRDP*KYHYTCVPCP*FRKGHVGRG 944 FV GENARRRDP KY YTCVPCP FRKG +G Sbjct: 235 FVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKG 268
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.275e-66 Identity = 114/230 (49.57%), Postives = 150/230 (65.22%), Query Frame = 1 Query: 160 LLELTASDDLDGFRKAIEEDGH-DIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPIL 846 LLE A DDL F++ IEE+ +IDESG WY R +GS+KMGFEERTPLM+A+M+GS +V++Y+I +G DVNR C + VTALHCA SG S + VE++K+LL+ASA N VDA GN+P DL+AK+ N +K ++ LL G +EE EE+E + T +YP D +LPDI G+YGTD+FRM++FKVKPCSRAYSHD P + Sbjct: 33 LLEFAACDDLSSFKREIEENPSVEIDESGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIHGSVMEE------------EEEELKSVVT-----------KYPADASLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFV 239 HSP 2 Score: 54.299 bits (129), Expect = 2.275e-66 Identity = 25/34 (73.53%), Postives = 26/34 (76.47%), Query Frame = 3 Query: 843 FVILGENARRRDP*KYHYTCVPCP*FRKGHVGRG 944 FV GENARRRDP KY YTCVPCP FRKG +G Sbjct: 238 FVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKG 271
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 9.257e-54 Identity = 126/287 (43.90%), Postives = 161/287 (56.10%), Query Frame = 1 Query: 151 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQ------------EQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPILSSLGRMLGVVIPRSTIIPVSHVPDFEK-VM*AGGCL*ICHGIF 972 F+ LLEL A++D++G R +IE D +DE+GLWYGR GS+ M + RTPLM+A+ +GS DV+ ++ DVNRACG+D TALHCAASGG+ N+++VVKLLL A AD+N +DA G R D+I L K +LQ LL G+ E + V + + +P LK KKEYPVD +LPDIKN IY TDEFRMY+FKV+PCSRAYSHD P + G PR PDF K G HG+F Sbjct: 45 FASLLELAANNDVEGVRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSIDVIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIVVPPKL--EGVKLMLQELLSADGSSTAERNLRVVTNVPNRSSSPCHSPTGENGGSGSGSPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHP-GENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVF 328
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 6.217e-51 Identity = 101/262 (38.55%), Postives = 144/262 (54.96%), Query Frame = 1 Query: 64 MCSGLKRKPTQTGFIMDTDSQKQDGLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYG-RIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPIL 846 MCSG RKP+ Q+++ S+LLEL A+DD+ R+ +EE+ + +GLWYG G ++G E RT M+A+++GS V+ YV+ + + RA +DG T LH AA+GG+AN+V +LLL A A V+++ A G R DL+ + + +K ++ LLK + S P KKEYP DLTLPD+K+G++ TDEFRMY+FKVKPCSRAYSHD P + Sbjct: 1 MCSG-PRKPSTPPL----PQQQKEATVMAASLLLELAAADDVAAVRRVVEEEKVSLGVAGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPAEAARASETDGATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLRAGDLLPRA-----TAAEKAIRLLLKSPAVS---------------PSSSPKKSASPPSPPPPQEAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFV 237 HSP 2 Score: 50.447 bits (119), Expect = 6.217e-51 Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 3 Query: 843 FVILGENARRRDP*KYHYTCVPCP*FRKG 929 FV GENARRRDP +Y Y+CVPCP FRKG Sbjct: 236 FVHPGENARRRDPRRYSYSCVPCPEFRKG 264
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 6.865e-49 Identity = 130/292 (44.52%), Postives = 168/292 (57.53%), Query Frame = 1 Query: 151 FSILLELTASDDLDGFRKAIEE-DGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALL--KGSGTGCVEEIDNLCDQVVYKM-----EEQEQPEIST---------PRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPILSSLGRMLGVVIPRSTIIPVSHVPDFEK-VM*AGGCL*ICHGIF 972 F+ LLEL A DD +G R+A+E DE+GLWYGR RK+ E RTPLM+A+ +GS V+ ++ VDVNR CGSDG TALHCAASGGS + VE VKLLL A AD ++ DA G RPAD+I+ + F++ K LQ LL +G G + + + ++ + E+ P + PRV+ +EKKEYPVD +LPDIKN IY +DEFRMY+FK++PCSRAYSHD P + G PR PDF K V G HG+F Sbjct: 67 FAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGR----RKV-LEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKM-FDA-KIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVT--SEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHP-GENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVF 348
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H56_ARATH (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 4.920e-47 Identity = 113/290 (38.97%), Postives = 163/290 (56.21%), Query Frame = 1 Query: 145 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNL-GFNS-------RKKVLQALLKGSGTGCVEEIDNLCD-----QVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPILSSLGRMLGVVIPRSTIIPVSHVPDFEK-VM*AGGCL*ICHGIF 972 ++FS LLE A +D++GFR+ + D I++ GLWY R R+M E+RTPLM+AS++GS DVV +++ ++N +CG D TALHCAASG S NS++VVKLLL+ AD N DA+GNRP D++ + + G + + +++ L S + +L + ++ P + +EKKEYP+D +LPDIK+GIY TDEFRM++FK++PCSRAYSHD P + G PR PDF+K G HG+F Sbjct: 37 HSFSALLEFAADNDVEGFRRQLS-DVSCINQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLDVVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLVVSPHAPGLRTILEEILKKDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDSVSSPTKPHGTDVTFASEKKEYPIDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECP-FAHPGENARRRDPRKFHYTCVPCPDFKKGSCKQGDMCEYAHGVF 324
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H50_ORYSJ (Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.139e-42 Identity = 120/289 (41.52%), Postives = 153/289 (52.94%), Query Frame = 1 Query: 160 LLELTASDDLDGFRKAIEEDGHDI----DESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK-SGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLI----AKNCNLG----FNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPILSSLGRMLGVVIPRSTIIPVSHVPDFEKVM*AGGC-----L*ICHGIF 972 LLEL A+DD+DG R A+ E G + D GLWYGR +E RTPLM+A+ +GS VVS ++ G VDVNR G+DG TALHCAASGGS N+V VVKLLL A AD + D+ G PAD+I A LG R++ L + + + D+ + +P + G KKEYPVD TLPDIK+ +Y +DEFRM+ FKV+PCSRAYSHD P + G PR P+F + GGC HG+F Sbjct: 27 LLELAAADDVDGLRGALAEGGEEAAELADGVGLWYGR-----SKAYEARTPLMVAATYGSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGADPATPDSAGRFPADVILAPPASPDALGDLEVLLGRRRALAVATSVASGSSSPPLSSSPDE--GNRSPSSRSSSLSPITVDRG--KKEYPVDPTLPDIKSSVYASDEFRMFAFKVRPCSRAYSHDWTECPFVHP-GENARRRDPRKHPYTAVPCPNFRR---PGGCPSGDSCEFSHGVF 302
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H67_ORYSJ (Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.581e-32 Identity = 80/230 (34.78%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 160 LLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGH-VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLNASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVPIL 846 LLEL A D+ G + + DE WY + G E TPLM+A+++GS + ++ + VD NRA S T LH AA+GGSA++ V LL A AD +D R +DL+A N K L +LL +KE+P D +LPDIKNG Y +D+FRMY+FKV+ CSRAYSHD P + Sbjct: 15 LLELAADDNAAGLGELLAAWPSLADEPAPWY-----TPARGAEPLTPLMVAAVYGSVGCLDALLSPPYLVDPNRASASSLSTPLHLAAAGGSASAPAAVSRLLAAGADPALLDHLQRRASDLVALPPNS--LPLKNHLLSLL---------------------------------------GARKEWPPDPSLPDIKNGAYASDDFRMYSFKVRACSRAYSHDWTECPFV 198 HSP 2 Score: 53.9138 bits (128), Expect = 2.581e-32 Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 3 Query: 843 FVILGENARRRDP*KYHYTCVPCP*FRKG 929 FV GENARRRDP KYHY+CVPCP F+KG Sbjct: 197 FVHPGENARRRDPRKYHYSCVPCPEFKKG 225
BLAST of DY263366 vs. ExPASy Swiss-Prot
Match: C3H54_ARATH (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana GN=PEI1 PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 4.562e-11 Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 1 Query: 715 YPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDLDRVP 840 Y +D ++P+I + IYG+DEFRMY +K+K C R SHD P Sbjct: 34 YEIDPSIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECP 75 HSP 2 Score: 36.965 bits (84), Expect = 4.562e-11 Identity = 17/30 (56.67%), Postives = 18/30 (60.00%), Query Frame = 3 Query: 855 GENARRRDP*KYHYTCVPCP*FRKGHVGRG 944 GE A RRDP +Y Y V CP FR G RG Sbjct: 80 GEKATRRDPRRYTYCAVACPAFRNGACHRG 109 The following BLAST results are available for this feature:
BLAST of DY263366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263366 ID=DY263366; Name=DY263366; organism=Citrus clementina; type=EST; length=1310bpback to top |