Aeg116200.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A067DAD5|A0A067DAD5_CITSI (NYN domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g045172mg PE=4 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.797e-47 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 0 Query: 1 MASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGR 107 MA+ AILTPKVGYG DELKR WFW R + KPQ ADVLL NYMV M DKRRFGCLVV+ DDSDF+EV +EA LR+LK VVV D +DGALKRI +A FSWSDLL+G+ Sbjct: 51 MAASAILTPKVGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWSDLLMGK 157
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A067FCB9|A0A067FCB9_CITSI (C2H2-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g023366mg PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.460e-45 Identity = 75/106 (70.75%), Postives = 87/106 (82.08%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGR 107 A+RAILTPK+GYGL DELKR FW RT+SDKPQAADV L N+MVDM DKR CLV++ DDSDF++VL+EA R LKTVVV D NDGALKRI DA FSW D+L+G+ Sbjct: 101 AARAILTPKIGYGLADELKRAGFWVRTVSDKPQAADVALRNHMVDMMDKRHVECLVIVSDDSDFVDVLQEAKYRCLKTVVVGDINDGALKRIADASFSWRDILMGK 206
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A2H5QUQ7|A0A2H5QUQ7_CITUN (NYN domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_263520 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.244e-45 Identity = 76/107 (71.03%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 1 MASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGR 107 MA+ AILTPKVGYG DELKR FW R + KPQ ADVL NYMV M DKRRFGCLVV+ DDSDF+EV +EA LR+LKTVVV D +DGALKRI +A FSWSDLL+G+ Sbjct: 6 MAASAILTPKVGYGFADELKRARFWVRMVLVKPQDADVLGRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKTVVVGDMSDGALKRIANAFFSWSDLLMGK 112
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: V4TJU6|V4TJU6_CITCL (C2H2-type domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020688mg PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.794e-44 Identity = 75/110 (68.18%), Postives = 89/110 (80.91%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGRQGRK 111 A+RAILTPK+GYGL DELKR FW RT+SDKPQAADV L N+MVDM DKR CLV++ DDSDF++VL+EA R LKTVVV D NDGALKRI DA FSW D+L+G+ ++ Sbjct: 188 AARAILTPKIGYGLADELKRAGFWVRTVSDKPQAADVALRNHMVDMMDKRHVECLVIVSDDSDFVDVLQEAKYRCLKTVVVGDVNDGALKRIADASFSWRDILMGKAKKE 297
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A2H5NU12|A0A2H5NU12_CITUN (C2H2-type domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_074630 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.868e-44 Identity = 75/106 (70.75%), Postives = 87/106 (82.08%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGR 107 A+RAILTPK+GYGL DELKR FW RT+SDKPQAADV L N+MVDM DKR CLV++ DDSDF++VL+EA R LKTVVV D NDGALKRI DA FSW D+L+G+ Sbjct: 177 AARAILTPKIGYGLADELKRAGFWVRTVSDKPQAADVALRNHMVDMMDKRHVECLVIVSDDSDFVDVLQEAKYRCLKTVVVGDINDGALKRIADASFSWRDILMGK 282
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A8J4RU09|A0A8J4RU09_9ROSI (C2H2-type domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_004643 PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.522e-42 Identity = 73/110 (66.36%), Postives = 91/110 (82.73%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGRQGRK 111 A+R ILTPKVGYGL DELKR FW RT+S+KPQAADV L N+MVDM D+RR C+V++ DDSDF++VL+EA LR LKTVVV D NDGALKR+ DA FSWS++L+G+ ++ Sbjct: 252 AARDILTPKVGYGLADELKRAGFWVRTVSNKPQAADVALKNHMVDMMDRRRVECMVLVSDDSDFVDVLKEAKLRCLKTVVVGDVNDGALKRVADAGFSWSEILMGKAKKE 361
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A7J7HQY4|A0A7J7HQY4_CAMSI (C2H2-type domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_007270 PE=4 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.578e-42 Identity = 69/110 (62.73%), Postives = 89/110 (80.91%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGRQGRK 111 ASR +LTPKVGYGLVDELKR FW RT+SD+PQAAD+ L N+MVDM D+R+ C+V++ DDSDF+EVL+EA LR TVVV D+NDGALKR DA FSW ++++G+ ++ Sbjct: 278 ASRGVLTPKVGYGLVDELKRAGFWVRTVSDRPQAADIALRNHMVDMMDRRQVECVVLVSDDSDFVEVLKEARLRCFNTVVVGDSNDGALKRTADAAFSWQEIMMGKAKKE 387
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A2H5QNS5|A0A2H5QNS5_CITUN (NYN domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_247440 PE=4 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.619e-42 Identity = 74/99 (74.75%), Postives = 79/99 (79.80%), Query Frame = 0 Query: 1 MASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFS 99 MAS+A LTPKVGY LV +LKRVWFW RTMSDK QAADVLL NYMVDM DKRRFGCLV + DDSDF+EVL+EA LR LKT V NDG LKRI D FS Sbjct: 92 MASKATLTPKVGYSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMNDGTLKRIADVFFS 190
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A2N9HN40|A0A2N9HN40_FAGSY (C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41554 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.228e-41 Identity = 72/110 (65.45%), Postives = 89/110 (80.91%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGRQGRK 111 A+R +LTPKVGYGL DELKR FW RT+SDKPQAADV L N+MVDM D+RR C+V++ DDSDF++VL EA LR LKTVVV D NDGALKR+ D FSWS++L+G+ ++ Sbjct: 193 AARDVLTPKVGYGLADELKRAGFWVRTVSDKPQAADVALKNHMVDMMDRRRVECMVLVSDDSDFVDVLMEAKLRCLKTVVVGDMNDGALKRVADVGFSWSEILMGKAKKE 302
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Match: A0A2H5QLG2|A0A2H5QLG2_CITUN (C2H2-type domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_241130 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.329e-41 Identity = 75/104 (72.12%), Postives = 82/104 (78.85%), Query Frame = 0 Query: 4 RAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGR 107 +AILTPKVG G DELKR FW RTM DKPQAADVLL N+MVDM DKR CLVVL D+SDF+EVL EA LR LKTVVV+D NDGAL RI ACFSW D L+G+ Sbjct: 103 KAILTPKVGSGSADELKREGFWVRTMFDKPQAADVLLRNHMVDMMDKRTIECLVVLSDNSDFVEVLLEANLRHLKTVVVKDINDGALNRISVACFSWWDKLMGK 206
BLAST of Aeg116200.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:7287895-7288989 FORWARD LENGTH=364) HSP 1 Score: 120.939 bits (302), Expect = 5.806e-34 Identity = 55/114 (48.25%), Postives = 82/114 (71.93%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGRQGRKLYQL 115 A+R +LTPK GYGL DELKR FW + +SDKP AAD L ++V++ DKR C+V++ DDSDF +L EA R L+TVV+ D+N+GALKR+ D +SW ++ +G+ +++ ++ Sbjct: 176 AARNVLTPKEGYGLADELKRAGFWVKMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKV 289
BLAST of Aeg116200.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:21121626-21122816 REVERSE LENGTH=396) HSP 1 Score: 75.0998 bits (183), Expect = 7.572e-17 Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 0 Query: 2 ASRAILTPKVGYGLVDELKRVWFWARTMSDKPQAADVLLTNYMVDMTDKRRFGCLVVLLDDSDFMEVLREAALRFLKTVVVEDTNDGALKRIVDACFSWSDLLVGRQGRK 111 A+R++LTPKVGYGL EL+R + +T+ DKPQAAD + + + R LV++ DD DF ++LR+A L T+VV D D AL R D WS + G G K Sbjct: 211 AARSLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKR-QIQHSMTRGIDWLVLVSDDKDFSDMLRKAREADLGTLVVSDM-DRALGRHADLWVPWSGVEKGEIGEK 318 The following BLAST results are available for this feature:
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-07 (Blastp of Aegle marmelos cv. AEG v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Aeg116200.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-07 (Blastp of Aegle marmelos cv. AEG v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Aeg116200.1 vs. Araport11
Analysis Date: 2024-02-07 (Blastp of Aegle marmelos cv. AEG v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Aegle marmelos cv. AEG v1.0 proteins
Date Performed: 2024-02-07 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Aeg116200.1-AEG_v1 ID=Aeg116200.1-AEG_v1; Name=Aeg116200.1; organism=Aegle marmelos; type=mRNA; length=348bpback to top protein sequence of Aeg116200.1-AEG_v1 >Aeg116200.1-AEG_v1 ID=Aeg116200.1-AEG_v1; Name=Aeg116200.1-AEG_v1; organism=Aegle marmelos; type=polypeptide; length=116bpback to top mRNA from alignment at contig58:311121..311468+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=348bp; location=Sequence derived from: contig58:311121..311468+ (Aegle marmelosback to top Coding sequence (CDS) from alignment at contig58:311121..311468+ >Aeg116200.1-AEG_v1 ID=Aeg116200.1-AEG_v1; Name=Aeg116200.1; organism=Aegle marmelos; type=CDS; length=348bp; location=Sequence derived from: contig58:311121..311468+ (Aegle marmelosback to top |