CMJ_chr2_000160.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A067GG08|A0A067GG08_CITSI (PMEI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042338mg PE=4 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 4.023e-147 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 Query: 1 MGSSRLLMLYGVLSLMAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNSICQICTLVIASLYSGGASP 202 MGSSRLLMLYGVLSLMAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNSICQICTLVIASLYSGGASP Sbjct: 1 MGSSRLLMLYGVLSLMAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNSICQICTLVIASLYSGGASP 202
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A2H5N5H6|A0A2H5N5H6_CITUN (PMEI domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_016500 PE=4 SV=1) HSP 1 Score: 411.379 bits (1056), Expect = 3.994e-145 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0 Query: 1 MGSSRLLMLYGVLSLMAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNSICQICTLVIASLYSGGASP 202 MGSSRLLMLYGVLSLMAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRT DADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSA LNSICQICTLVIASLYSGGASP Sbjct: 1 MGSSRLLMLYGVLSLMAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTPDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSALLNSICQICTLVIASLYSGGASP 202
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: V4WA97|V4WA97_CITCL (PMEI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10017450mg PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.588e-133 Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0 Query: 16 MAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNSICQICTLVIASLYSGGASP 202 MAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRT DADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSA LNSICQICTLVIASLYSGGASP Sbjct: 1 MAVVSSSMGTNNEYEYAAAGSAPSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTPDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSALLNSICQICTLVIASLYSGGASP 187
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: B9SGW4|B9SGW4_RICCO (Pectinesterase inhibitor, putative OS=Ricinus communis OX=3988 GN=RCOM_0820430 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.312e-37 Identity = 78/161 (48.45%), Postives = 101/161 (62.73%), Query Frame = 0 Query: 45 ADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTS-------ASLNSICQICTLVIASLYSG 198 +D T++VDKVC++TS+Y CV++LYSD RT DAD YTLA++S GLAYANA TRD I+ ELL KN D + LQ C R+YNKA+ L A NDLNSETFF L AN +R A DC A + S + L ++CQIC ++ L++G Sbjct: 20 SDAAGATTKLVDKVCQQTSSYSFCVNSLYSDSRTPDADEYTLAFISVGLAYANATSTRDHIS-ELL--KNHHDHYQQPLQR---CVRNYNKAISLLAMADNDLNSETFFELADLANQASRAATDCDAAFKGIPSPPLANRNSDLKALCQICG-ILGKLFTG 173
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A2P5C9K1|A0A2P5C9K1_PARAD (Pectinesterase inhibitor domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_172290 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.224e-36 Identity = 78/173 (45.09%), Postives = 102/173 (58.96%), Query Frame = 0 Query: 37 APSPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQA------HYPTFTSAS----LNSICQICTLVIASLYSGG 199 A S S G A K TE+VD VC KTSNY CV++LY+DPRT AD Y LA+V FG++Y NA T+D IA+ K +L L+ C +DY KAV LE A NDLNSETFF L A + A+DCQA H P + ++ L +C+IC +V++ L++GG Sbjct: 27 ASSSSSGRATTILKPTELVDGVCNKTSNYSFCVESLYADPRTPRADSYGLAFVVFGMSYLNATGTQDLIAELSKKAKRGGQHDQPLLTRLQRCGKDYEKAVSALEMAYNDLNSETFFELAEMAGVASTSAEDCQAGFEKRHHSPPLSLSARNHELRGLCEIC-VVVSKLFTGG 198
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A7J7DZ38|A0A7J7DZ38_TRIWF (Cell wall / vacuolar inhibitor of fructosidase 2-like OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00678 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.325e-36 Identity = 76/158 (48.10%), Postives = 98/158 (62.03%), Query Frame = 0 Query: 49 RKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNS-------ICQICTLVIASLYSGG 199 R VTE+V VC +TSNY CV++LY D RT ADRY LAYVSFG AY NA+ T+DRI L +N+S S L L+ C+ DY+KA +E A NDLNSETFFTL A + A DCQ + S+ L+S +C+IC +VI+ L++G Sbjct: 32 RDVTELVHSVCNQTSNYTFCVESLYKDTRTPHADRYELAYVSFGFAYTNAMDTKDRITG---LLRNESTSHEYGLDRLQRCDEDYDKAGPAIEIAFNDLNSETFFTLAGLAGIASDAAADCQVAFEGSGSSPLDSQNKNLKGLCEIC-VVISKLFTGA 185
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A2P5DYA2|A0A2P5DYA2_TREOI (Pectinesterase inhibitor domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_238300 PE=4 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.599e-36 Identity = 76/167 (45.51%), Postives = 99/167 (59.28%), Query Frame = 0 Query: 43 GAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQA------HYPTFTSAS----LNSICQICTLVIASLYSGG 199 G A K TE+VD VC KTSNY CV++LY+DPRT AD Y LA+V FG++Y NA TRD IA+ K +L L+ C +DY KAV LE A NDLNSETFF L A + A+DCQA H P + ++ L +C+IC +V++ L++GG Sbjct: 34 GRATTILKPTELVDGVCNKTSNYSFCVESLYADPRTPRADSYGLAFVVFGMSYLNATGTRDLIAELSKKAKRGGQHDQPLLTRLQRCGKDYEKAVSALEMAYNDLNSETFFELAEMAGVASTSAEDCQAGFEKSHHSPPLSLSARNHELRGLCEIC-VVVSKLFTGG 199
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A5N5LMB9|A0A5N5LMB9_9ROSI (PMEI domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_012076 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.892e-34 Identity = 76/154 (49.35%), Postives = 94/154 (61.04%), Query Frame = 0 Query: 52 TEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHYPTFTSASLNS-------ICQICTLVIASLYSG 198 T +VDKVC KTSNY CV+ LYSDPR DAD YTLA+++FG+AYANA TRD IA+ L KN S + L IC DY +AV LE A NDLNSETFF L A ++ +D CQ + +S L S +C+I VIA L++G Sbjct: 34 TGLVDKVCNKTSNYTFCVEALYSDPRAPDADSYTLAFIAFGVAYANANSTRDYIAELL---KNTSGQDYH--SRLEICGHDYLRAVSKLEEACNDLNSETFFGLAKLAGAASKASDHCQDAFRGISSPPLGSRNGDLKRLCEI-GAVIAKLFTG 181
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A1R3HQG7|A0A1R3HQG7_9ROSI (Pectinesterase inhibitor OS=Corchorus olitorius OX=93759 GN=COLO4_27522 PE=4 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 9.987e-34 Identity = 79/167 (47.31%), Postives = 107/167 (64.07%), Query Frame = 0 Query: 40 PSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQAHY-------PTFT-SASLNSICQICTLVIASLYSG 198 P +A + T++V+++C +TSNY CV++LYSDPRT DAD Y LAYVSFGLAY NA T+D IA L KN + S L+ L+IC+RDY+KAV LE A NDLNSET+F L A A AD+CQ+ + P T +A L ++ IC +V++ L++G Sbjct: 18 PFQSSAAISNVPTKLVNEICNQTSNYSFCVESLYSDPRTPDADAYELAYVSFGLAYLNATATQDSIAKLL---KNTTASAAS-LKRLKICKRDYHKAVSALEQAFNDLNSETYFQLAKLAGRAAAAADNCQSAFEGTHNYSPLATMNACLKALSGIC-IVVSKLFTG 179
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Match: A0A6P5Y2K6|A0A6P5Y2K6_DURZI (cell wall / vacuolar inhibitor of fructosidase 2-like OS=Durio zibethinus OX=66656 GN=LOC111288147 PE=4 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.000e-33 Identity = 83/168 (49.40%), Postives = 103/168 (61.31%), Query Frame = 0 Query: 39 SPSGGAADGNRKVTEIVDKVCKKTSNYKNCVDTLYSDPRTTDADRYTLAYVSFGLAYANAVQTRDRIADELLLHKNDSDSRHEILQNLRICERDYNKAVKFLESALNDLNSETFFTLPSYANHTARLADDCQA-----HYPTFTS--ASLNSICQICTLVIASLYSGG 199 SP AA K +VDKVC +TSNY CV+ LYSDPRT AD Y LAYVSFGLAY NA T+D IA EL+ N + + H + L+IC+ DY+KAV LE A NDLNSETFF L A A ADDCQ+ HY + A L ++ IC +V++ L++ G Sbjct: 17 SPLPSAATPTNK---LVDKVCNQTSNYTFCVEALYSDPRTPAADAYQLAYVSFGLAYLNASATQDHIA-ELIKISNSTSASH---KRLKICQHDYHKAVLALEEAYNDLNSETFFQLAKLAARAAAAADDCQSAFRGTHYSPLATRNAYLKALSDIC-VVVSKLFTEG 176 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_000160.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_000160.1_cmj_v1 ID=CMJ_chr2_000160.1_cmj_v1; Name=CMJ_chr2_000160.1; organism=Citrus maxima; type=mRNA; length=609bpback to top protein sequence of CMJ_chr2_000160.1_cmj_v1 >CMJ_chr2_000160.1_cmj_v1 ID=CMJ_chr2_000160.1_cmj_v1; Name=CMJ_chr2_000160.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=203bpback to top mRNA from alignment at chr2:102840..103448+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=609bp; location=Sequence derived from: chr2:102840..103448+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:102840..103448+ >CMJ_chr2_000160.1_cmj_v1 ID=CMJ_chr2_000160.1_cmj_v1; Name=CMJ_chr2_000160.1; organism=Citrus maxima; type=CDS; length=609bp; location=Sequence derived from: chr2:102840..103448+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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