CMJ_chr2_003360.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A067GE59|A0A067GE59_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026058mg PE=4 SV=1) HSP 1 Score: 442.965 bits (1138), Expect = 1.851e-156 Identity = 221/244 (90.57%), Postives = 223/244 (91.39%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSNQ------------------VLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR 226 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTS++ DSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR Sbjct: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSHKRSMSAQLSSETSFNNSFSFSPDSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR 244
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A2H5N4A8|A0A2H5N4A8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_013340 PE=4 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.212e-149 Identity = 213/244 (87.30%), Postives = 219/244 (89.75%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSNQ------------------VLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR 226 M S+RILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTS++ DSVLSP KLQTILSGKEVTVTEEV ETKQAQAHYHVQEFVSKKKGVHVASTRRR KNSESKSLSDLEFEELKGFMDLGFVFTEEDNK+SRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRK+NSLLINW+ISALNNEMDIKDNLRWWAHTVALSAVR Sbjct: 1 MGSDRILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSHKRSMSAQLSSETSFNNSFSFSPDSVLSPQKLQTILSGKEVTVTEEVKETKQAQAHYHVQEFVSKKKGVHVASTRRRTKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKNSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKDNSLLINWEISALNNEMDIKDNLRWWAHTVALSAVR 244
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: V4UF34|V4UF34_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016436mg PE=4 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.212e-149 Identity = 213/244 (87.30%), Postives = 219/244 (89.75%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSNQ------------------VLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR 226 M S+RILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTS++ DSVLSP KLQTILSGKEVTVTEEV ETKQAQAHYHVQEFVSKKKGVHVASTRRR KNSESKSLSDLEFEELKGFMDLGFVFTEEDNK+SRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRK+NSLLINW+ISALNNEMDIKDNLRWWAHTVALSAVR Sbjct: 1 MGSDRILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSHKRSMSAQLSSETSFNNSFSFSPDSVLSPQKLQTILSGKEVTVTEEVKETKQAQAHYHVQEFVSKKKGVHVASTRRRTKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKNSRLVEIVPGLQRLGKKDDTVDNSPVSRPYLSEAWEIMDTTRKDNSLLINWEISALNNEMDIKDNLRWWAHTVALSAVR 244
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A6J1B5H6|A0A6J1B5H6_9ROSI (uncharacterized protein LOC110424353 OS=Herrania umbratica OX=108875 GN=LOC110424353 PE=4 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.182e-74 Identity = 139/250 (55.60%), Postives = 163/250 (65.20%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPT------SNQVL------------ADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTR-RRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDT-----VDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR 226 M+S I+KLFD+CWFEMEI KK S + E D Q+EE SK EF R PT S+Q+ DSVL PKL I+SGKE+T E + +A ++QE +KK V STR RKK SKSLSDLEFEELKGFMDLGFVF+EEDNKDSRLVEI+PGLQRLGKK+D D + VSRPYLSEAWE+ RKEN L+ NWK+ L NE+D+KD+LRWWAHTVA S VR Sbjct: 1 MESGEIIKLFDSCWFEMEIFKKHVSPSPSTSFEPKPDRQDEENLSKPEFKRAPTLHTRSMSDQLSLSTSFIGDGSFSPDSVLHAPKLHKIISGKEIT------EEELQEADSNIQEAPNKKA---VTSTRISRKKKGISKSLSDLEFEELKGFMDLGFVFSEEDNKDSRLVEIIPGLQRLGKKEDDEESKEADKAEVSRPYLSEAWEVSGRRRKENPLM-NWKVPTLGNEIDMKDSLRWWAHTVA-STVR 239
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A6P5X7W4|A0A6P5X7W4_DURZI (uncharacterized protein LOC111280752 OS=Durio zibethinus OX=66656 GN=LOC111280752 PE=4 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.413e-73 Identity = 137/252 (54.37%), Postives = 162/252 (64.29%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPT------------------SNQVLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRR--RKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKK------DDTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVALSAVR 226 M+S I+KLFD+CWFEMEILKK+ S + E + D Q EEK K EF R PT S+ DSV PKL I+SGKE+T EE+ ET +QE +KK V + RR R+K SKSLSDLEFEELKGFMDLGFVF EEDNKDSRLVEI+PGLQRLGKK + D + VSRPYLSEAWE+ + RKEN L+ NW++ AL NE+D+KD+LRWWAHTVA S VR Sbjct: 1 MESGEIIKLFDSCWFEMEILKKRISPSTSTSFEPNPDRQVEEKSLKPEFTRTPTLHTRSMSDQLSISTSFLGSDSFSPDSVFYSPKLHKIMSGKEIT-EEELQET--------IQESPNKK----VVANRRITRRKKGLSKSLSDLEFEELKGFMDLGFVFLEEDNKDSRLVEIIPGLQRLGKKKVEDESKEADDKAEVSRPYLSEAWEVYERRRKENPLM-NWRVPALGNEIDMKDSLRWWAHTVA-STVR 237
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A5C7GTK3|A0A5C7GTK3_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_026946 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.995e-69 Identity = 137/257 (53.31%), Postives = 171/257 (66.54%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPTSNQ------------VLA---DSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKK--NSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDN---------SPVSRPYLSEAWEIMD----TTRKENSLLI-NWKISALNNEMDIKDNLRWWAHTVALSAVR 226 MD E ++K+FD+CWFEMEILK Q RSS S EA+ D +NEEK SK E R+P+ ++ VL+ DSVL PKL+TILSGKE + + E ++ + + Q+ VSKKK R+R ESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRL +D DN + + RPYLSEAW+++D +++ LLI NWKI AL+NE+D+KD+L+WWAHTVA S VR Sbjct: 1 MDFENVIKIFDSCWFEMEILKSQPRSSSLSVFEANPDQENEEKQSKPEISRIPSRHKRSMSADLTSFDSVLSLSPDSVLFAPKLETILSGKESIIEGKEEEQEEPKPAHDFQDHVSKKKAAARTRRRKRNTFGGGESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLKGRDQISDNHINDNHESANNIPRPYLSEAWDVLDMKKEEEEEKSPLLIKNWKIPALSNEIDMKDHLKWWAHTVA-STVR 256
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A5D2QJ16|A0A5D2QJ16_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G166600v1 PE=4 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.030e-68 Identity = 127/253 (50.20%), Postives = 158/253 (62.45%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPT-------------------SNQVLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRR--RKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDN-----------SPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVA 221 M+S+ I+ LFD+CWFEMEI KKQ+ S + E +++ + EE SK EF R P+ S + DSVL PKL I+SGKE+T E + +QE + K AS RR R+K SKSLSDLEFEELKGFMDLGFVF+EEDNKDSRLVEI+PGLQRLG+KD +N + VSRPYLSEAW + + RKEN L+ NW++ AL NE+D+KD+LRWWAHTVA Sbjct: 1 MESDGIISLFDSCWFEMEIFKKQTSPSTSTVSEPNQNLRVEETSSKPEFTRTPSLHTRSMSDQLSLNSTSFIGSASLSPDSVLHSPKLHKIISGKEMT------EEELQDNGSRIQE---EPKNETAASNRRSSRRKKGTSKSLSDLEFEELKGFMDLGFVFSEEDNKDSRLVEIIPGLQRLGRKDGEEENKEAAGAEDDDRAEVSRPYLSEAWHVSERRRKENPLM-NWRVPALGNEVDVKDSLRWWAHTVA 243
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A5D2Z7Z5|A0A5D2Z7Z5_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A05G164000v1 PE=4 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.112e-68 Identity = 125/251 (49.80%), Postives = 157/251 (62.55%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPT-------------------SNQVLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDN-----------SPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVA 221 M+S+ I+ LFD+CWFEMEI KKQ+ S + E +++ + EE SK EF R P+ S + DSVL PKL I+SGKE+T E + +QE K+ + RRKK + SKSLSDLEFEELKGFMDLGFVF+EEDNKDSRLVEI+PGLQRLG+KD +N + VSRPYLSEAW + + RKEN L+ NW++ AL NE+D+KD+LRWWAHTVA Sbjct: 1 MESDGIISLFDSCWFEMEIFKKQTSPSTSTVSEPNQNLRVEETSSKPEFTRTPSLHTRSMSDQLSLNSTSFIGSASLSPDSVLHSPKLHKIISGKEMT------EEELQDNGSRIQEEPKKETAASNRRSSRRKKGT-SKSLSDLEFEELKGFMDLGFVFSEEDNKDSRLVEIIPGLQRLGRKDGEEENKEAAGAEDDDRAEVSRPYLSEAWHVSERRRKENPLM-NWRVPALGNEVDVKDSLRWWAHTVA 243
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A6P5WF02|A0A6P5WF02_DURZI (uncharacterized protein LOC111274230 OS=Durio zibethinus OX=66656 GN=LOC111274230 PE=4 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.312e-68 Identity = 129/243 (53.09%), Postives = 156/243 (64.20%), Query Frame = 0 Query: 6 ILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVPT-------------------SNQVLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRR--RKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKD------DTVDNSPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVA 221 I+KL+D+CWFEMEI K Q S + E + D Q EE SK +F R T S+ DSVL PKL I+SGKE+T EE+ ET +QE +KK V ++RR R+K +KSLSDLEFEELKGFMDLGFVF+EEDNKDSRLVEI+PGLQRLG+K+ + D VSRPYLSEAWE+ + RKEN L+ NWK+ AL NE+DIKD+LRWWAHTVA Sbjct: 69 IMKLYDSCWFEMEIFKTQKSPSTSASFEPNPDYQIEENSSKPDFTRTSTLHTRSMSDQSTLISTSFIGSDSFSPDSVLHSPKLHKIISGKEIT-EEELQET--------IQESPNKK----VVASRRITRRKKGTTKSLSDLEFEELKGFMDLGFVFSEEDNKDSRLVEIIPGLQRLGRKEGEEDSKEADDKVEVSRPYLSEAWELSERRRKENPLM-NWKVPALGNEIDIKDSLRWWAHTVA 297
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Match: A0A5D2GI29|A0A5D2GI29_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A05G164200v1 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 2.282e-68 Identity = 127/253 (50.20%), Postives = 157/253 (62.06%), Query Frame = 0 Query: 1 MDSERILKLFDTCWFEMEILKKQSRSSICSKIEASRDNQNEEKPSKAEFLRVP-------------------TSNQVLADSVLSPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRR--RKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTVDN-----------SPVSRPYLSEAWEIMDTTRKENSLLINWKISALNNEMDIKDNLRWWAHTVA 221 M+S+ I+ LFD+CWFEMEI KKQ+ S + E +++ + EE SK EF R P S + DSVL PKL I+SGKE+T E + +QE + K AS RR R+K SKSLSDLEFEELKGFMDLGFVF+EEDNKDSRLVEI+PGLQRLG+KD +N + VSRPYLSEAW + + RKEN L+ NW++ AL NE+D+KD+LRWWAHTVA Sbjct: 1 MESDGIISLFDSCWFEMEIFKKQTSPSTSTVSEPNQNLRVEETSSKPEFTRTPYLHTRSMSDQLSLNSTSFIGSASLSPDSVLHSPKLHKIISGKEMT------EEELQDNGSRIQE---EPKNETAASNRRSSRRKKGTSKSLSDLEFEELKGFMDLGFVFSEEDNKDSRLVEIIPGLQRLGRKDGEEENKEAAGAEDDDRAEVSRPYLSEAWHVSERRRKENPLM-NWRVPALGNEVDVKDSLRWWAHTVA 243
BLAST of CMJ_chr2_003360.1 vs. Araport11
Match: AT2G42760.1 (| DUF1685 family protein | Chr2:17796382-17797185 REVERSE LENGTH=267 | 201606) HSP 1 Score: 122.865 bits (307), Expect = 7.388e-34 Identity = 81/179 (45.25%), Postives = 106/179 (59.22%), Query Frame = 0 Query: 65 SPPKLQTILSGKEVTVTEEVGETKQAQAHYHVQEFVSKKKGVHVASTRRRKKNSESKSLSDLEFEELKGFMDLGFVFTEEDNKDSRLVEIVPGLQRLGKKDDTV-------------DNSPVSRPYLSEAWEIMDTTRKENSLL--INWKI--SALNNEMDIKDNLRWWAHTVALSAVR 226 +P KLQTILSGKEV T + ++ +KK ++ R RK KS+SDLE+EELKGFMDLGFVF+E+D+KDS LV I+PGLQRL KKDD V + +RPYLSEAW+ + + + I W++ A +E+D+KDNLR WAH VA S +R Sbjct: 98 TPMKLQTILSGKEVNAF-----TIAERERLLSEKEEQRKKKKKKSNVRTRK----GKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKKDDGVTKEEEEEEEEDKIGGNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNLRLWAHAVA-STIR 266 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_003360.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_003360.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_003360.1_cmj_v1 ID=CMJ_chr2_003360.1_cmj_v1; Name=CMJ_chr2_003360.1; organism=Citrus maxima; type=mRNA; length=681bpback to top protein sequence of CMJ_chr2_003360.1_cmj_v1 >CMJ_chr2_003360.1_cmj_v1 ID=CMJ_chr2_003360.1_cmj_v1; Name=CMJ_chr2_003360.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=227bpback to top mRNA from alignment at chr2:1935923..1936665+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=743bp; location=Sequence derived from: chr2:1935923..1936665+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:1935923..1936665+ >CMJ_chr2_003360.1_cmj_v1 ID=CMJ_chr2_003360.1_cmj_v1; Name=CMJ_chr2_003360.1; organism=Citrus maxima; type=CDS; length=681bp; location=Sequence derived from: chr2:1935923..1936665+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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