CMJ_chr2_004730.4
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A067G8I8|A0A067G8I8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025545mg PE=3 SV=1) HSP 1 Score: 508.834 bits (1309), Expect = 0.000e+0 Identity = 249/251 (99.20%), Postives = 249/251 (99.20%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDE--ETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 249
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDE ETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 251
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: V4W8N2|V4W8N2_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016378mg PE=3 SV=1) HSP 1 Score: 508.449 bits (1308), Expect = 0.000e+0 Identity = 249/251 (99.20%), Postives = 249/251 (99.20%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE--DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 249
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEGEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 251
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A2H5N2N6|A0A2H5N2N6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_011880 PE=3 SV=1) HSP 1 Score: 494.967 bits (1273), Expect = 3.117e-176 Identity = 248/275 (90.18%), Postives = 249/275 (90.55%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE--DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEH------------------------ALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 249
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKND+EGEDVDE DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEH ALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDEEGEDVDEGEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHMLILSLLVNIFFLSLRQYLLSFSQALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 275
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A067GKJ7|A0A067GKJ7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025545mg PE=3 SV=1) HSP 1 Score: 492.271 bits (1266), Expect = 1.301e-175 Identity = 244/251 (97.21%), Postives = 244/251 (97.21%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDE--ETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 249
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDE ETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQ FKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQ-----FKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 246
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: V4UEG6|V4UEG6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016378mg PE=3 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 3.059e-145 Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE--DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEH 201
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEH
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEGEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEH 203
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A067G8R2|A0A067G8R2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025545mg PE=4 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.092e-118 Identity = 168/174 (96.55%), Postives = 169/174 (97.13%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDE--ETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNK 172
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDE ETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKL +
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: V4TPY1|V4TPY1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016378mg PE=4 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.287e-118 Identity = 168/174 (96.55%), Postives = 169/174 (97.13%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE--DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNK 172
MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDE DEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKL +
Sbjct: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHYRHFSSNKNDDEGEDVDEGEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A2P5WTI5|A0A2P5WTI5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26281 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 6.604e-95 Identity = 166/244 (68.03%), Postives = 187/244 (76.64%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGP---TNWSHYRHFSSNKNDDEGEDVDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
MAHRRCLH H AL+SLK P L + LTP + + +S L P T W + RHFSS K+DD +E E E+++D E +E+ D+ R+Y+ EKEAEAA IGYKV+GPL++SDRVFK YEP FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGS QTIIGRP++PDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI DIQGIEK
Sbjct: 1 MAHRRCLHSALLHGTALISLKKSPPLSI-----VNALTPKPNPVITTSNLEPSWFTPWFYVRHFSSRKSDDSE---NEAEMEDSSDVEEESDEMAS---DMVRDYSPGEKEAEAAAIGYKVVGPLQRSDRVFKDYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSPTQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITDIQGIEK 233
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A5D2G6X3|A0A5D2G6X3_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A06G151700v1 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 1.373e-94 Identity = 166/244 (68.03%), Postives = 187/244 (76.64%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGP---TNWSHYRHFSSNKNDDEGEDVDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
MAHRRCLH H AL+SLK P L + LTP + + +S L P T WS+ RHFSS K+DD +E E E+++D E +E+ D+ R+Y+ EKEAEAA IGYKV+GPL++SDRVFK YEP FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGS QTIIGRP++PDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI IQGIEK
Sbjct: 1 MAHRRCLHSALLHGTALISLKKSPPLSI-----VNALTPKPNPVITTSNLEPSWFTPWSYVRHFSSRKSDDSE---NEAEMEDSSDVEEESDEMAS---DMVRDYSPGEKEAEAAAIGYKVVGPLQRSDRVFKDYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSPTQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITYIQGIEK 233
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Match: A0A1U8IJV0|A0A1U8IJV0_GOSHI (50S ribosomal protein L21, mitochondrial-like OS=Gossypium hirsutum OX=3635 GN=LOC107895347 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 1.435e-94 Identity = 166/244 (68.03%), Postives = 187/244 (76.64%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGP---TNWSHYRHFSSNKNDDEGEDVDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
MAHRRCLH H AL+SLK P L + LTP + + +S L P T WS+ RHFSS K+DD +E E E+++D E +E+ D+ R+Y+ EKEAEAA IGYKV+GPL++SDRVFK YEP FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGS QTIIGRP++PDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI IQGIEK
Sbjct: 1 MAHRRCLHSALLHGTALISLKKSPPLSI-----VNALTPKPNPVITTSNLEPSWFTPWSYVRHFSSRKSDDSE---NEAEMEDSSDVEEESDEMAS---DMVRDYSPGEKEAEAAAIGYKVVGPLQRSDRVFKDYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSPTQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITYIQGIEK 233
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RM21_ARATH (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL21M PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 1.599e-73 Identity = 144/250 (57.60%), Postives = 178/250 (71.20%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLP------FS-TSISLKGLTPFQHRSLISSTLGPTNW--SHYRHFSSNKNDDEGEDVDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
MA RC LSR A + S+ ++ FS TSIS + P +RSL + ++W S R FSSN D + ++ + +++ +E + E+ D ++ REY+ EK EA EIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFTE+LKFC++NDKL L KVLLLGS QTIIGRP++PDA VHAVVEEHALD KV+IFKKKRRKNYRRT+GHRQELTKLRI DIQGIEK
Sbjct: 1 MASLRCFRELSRRATTVFSINQTRSISSFHGIEFSGTSISHGTVIP--NRSLTRNLPWYSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADM--EVEREYSPAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIEK 246
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RK21_SPIOL (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.429e-27 Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIE 240
FAVV IGS Q+ V G I+T+RLK VNDK++LNKVLL+G++ T IG P+V +AAVHAVVEE LD KVI+FK K++KNYRR GHRQ +T+++I I G E
Sbjct: 124 FAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYE 228
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RL21_RHOCS (50S ribosomal protein L21 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rplU PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 6.462e-24 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 237
FAV++ G Q+KV+NGD I E+L + + L+ VL++ +T IG P+V AAV A V + K+IIFKKKRR+NYRR GHRQ+LT LRI IQ
Sbjct: 2 FAVIRTGGKQYKVANGDVIKVEKL-VADAGATVTLDDVLMVSDAGKTTIGTPVVQGAAVTAEVVAQSRGPKIIIFKKKRRQNYRRKNGHRQDLTVLRITGIQ 102
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RK21_ARATH (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL21 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.407e-22 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 0 Query: 106 EKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
E E E +I V+ + + K E FAV+ +G Q+ V G ++T+RLK V+D+++LNKVLL+G++ T IG+P+V +A VHAVVE L+ KV++FK K +K YRR GHRQ T++RI I G E+
Sbjct: 71 EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEE 206
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RL21_MAGSA (50S ribosomal protein L21 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplU PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.652e-22 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 236
FAV+Q G Q+KV++GD I E+L E +++L++VL++G + IG P+V A+V A V A K+I+FKK+RR+N RR GHRQ+LT LRI DI
Sbjct: 2 FAVIQTGGKQYKVASGDVIRVEKLA-GEAGAEVVLDQVLMVGDK----IGVPVVAGASVKATVVAQARGEKIIVFKKRRRQNSRRKNGHRQDLTILRITDI 97
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RM21_DICDI (Probable 39S ribosomal protein L21, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=mrpl21 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.103e-21 Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 0 Query: 135 AFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 249
+FAVV I Q+KV GD I T++++ +V + ++L+KVLL+G++++TIIG+P++ + VHA +EE A V IFK K RKNY+RT G + T +R I GI K E T
Sbjct: 61 SFAVVHISGKQYKVIEGDIIMTDKIQ-VDVGEHIVLDKVLLVGTKNETIIGKPIISNFKVHAYIEEQAKTEHVTIFKHKPRKNYKRTTGFQGLATYIR---IGGIIKGQETTTTT 171
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RL21_METFK (50S ribosomal protein L21 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) OX=265072 GN=rplU PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.596e-20 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 233
+AV++ G Q++V+ GD + E+L EV ++ L+KVLL+ T IG P+V A+V A V H KV+IFK +RRK+YR+T+GHRQ T+++I
Sbjct: 2 YAVIKTGGKQYRVAAGDKLKVEKLA-GEVGSEITLDKVLLVSDGDNTTIGSPLVQGASVQAKVVAHGRGDKVLIFKMRRRKHYRKTQGHRQSFTEIQI 98
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RL21_DICTD (50S ribosomal protein L21 OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX=515635 GN=rplU PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.352e-20 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 236
F VV+ G Q+KVS G + E+LK V D+++L+KVLL+G + + IIG+P V A V A V KVI+FK KR+K+YRR GHRQ T+L I +I
Sbjct: 2 FVVVETGGKQYKVSVGSMVNVEKLK-ANVGDEVVLDKVLLVGKEDEVIIGQPYVEGAKVIAKVVRQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSIKEI 101
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RL21_PELCD (50S ribosomal protein L21 OS=Pelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=rplU PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.024e-19 Identity = 42/102 (41.18%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 237
+AV++ G Q+KVS GD + E+++ V D + L++VL++G + + IG P++P A V A + + D KV++F KRRK YR+T GHRQ +T+L+I I+
Sbjct: 2 YAVIKTGGKQYKVSEGDLVKIEKIEGA-VGDTIELDEVLMVGGE-EVKIGTPLLPGAKVTARIVQQGKDKKVLVFHSKRRKGYRKTYGHRQPITRLQITGIE 101
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Match: RL21_PARL1 (50S ribosomal protein L21 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=rplU PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.274e-19 Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 0 Query: 136 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTI-IGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQG 238
FAV++ G Q++V+ D + ER E DK+ L +VL+LG + T+ +G P+V A V A + EH K+ IFKK+RR+NYRR GHRQ+L ++I+DI G
Sbjct: 2 FAVIRTGGKQYRVAKDDVLEVER-NGGEAGDKIDL-EVLMLGGEGGTLKVGAPLVDGAKVKAEIVEHTRGPKITIFKKRRRQNYRRKNGHRQDLMLVKILDIAG 103
BLAST of CMJ_chr2_004730.4 vs. Araport11
Match: AT4G30930.1 (| Ribosomal protein L21 | Chr4:15050170-15051630 REVERSE LENGTH=270 | 201606) HSP 1 Score: 228.024 bits (580), Expect = 1.636e-74 Identity = 144/250 (57.60%), Postives = 178/250 (71.20%), Query Frame = 0 Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLP------FS-TSISLKGLTPFQHRSLISSTLGPTNW--SHYRHFSSNKNDDEGEDVDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
MA RC LSR A + S+ ++ FS TSIS + P +RSL + ++W S R FSSN D + ++ + +++ +E + E+ D ++ REY+ EK EA EIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFTE+LKFC++NDKL L KVLLLGS QTIIGRP++PDA VHAVVEEHALD KV+IFKKKRRKNYRRT+GHRQELTKLRI DIQGIEK
Sbjct: 1 MASLRCFRELSRRATTVFSINQTRSISSFHGIEFSGTSISHGTVIP--NRSLTRNLPWYSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADM--EVEREYSPAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIEK 246
BLAST of CMJ_chr2_004730.4 vs. Araport11
Match: AT1G35680.1 (| Ribosomal protein L21 | Chr1:13208777-13210246 FORWARD LENGTH=220 | 201606) HSP 1 Score: 95.1301 bits (235), Expect = 1.440e-23 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 0 Query: 106 EKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEK 241
E E E +I V+ + + K E FAV+ +G Q+ V G ++T+RLK V+D+++LNKVLL+G++ T IG+P+V +A VHAVVE L+ KV++FK K +K YRR GHRQ T++RI I G E+
Sbjct: 71 EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEE 206 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_004730.4 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_004730.4 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_004730.4 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_004730.4_cmj_v1 ID=CMJ_chr2_004730.4_cmj_v1; Name=CMJ_chr2_004730.4; organism=Citrus maxima; type=mRNA; length=750bpback to top protein sequence of CMJ_chr2_004730.4_cmj_v1 >CMJ_chr2_004730.4_cmj_v1 ID=CMJ_chr2_004730.4_cmj_v1; Name=CMJ_chr2_004730.4_cmj_v1; organism=Citrus maxima; type=polypeptide; length=250bpback to top mRNA from alignment at chr2:2777212..2781808+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4597bp; location=Sequence derived from: chr2:2777212..2781808+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:2777212..2781808+ >CMJ_chr2_004730.4_cmj_v1 ID=CMJ_chr2_004730.4_cmj_v1; Name=CMJ_chr2_004730.4; organism=Citrus maxima; type=CDS; length=750bp; location=Sequence derived from: chr2:2777212..2781808+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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