CMJ_chr2_004990.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A067GKQ7|A0A067GKQ7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026705mg PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 3.606e-171 Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHFNPSQLFLASFLS 234
MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINH VQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHFNPSQLFLASFLS
Sbjct: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHQVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHFNPSQLFLASFLS 234
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A2H5N2J5|A0A2H5N2J5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_011640 PE=4 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 9.398e-169 Identity = 231/234 (98.72%), Postives = 231/234 (98.72%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHFNPSQLFLASFLS 234
MERIAI CLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINH VQAPAYVIGDP FAAKYDPVKPTAYAWNVKIHFNPSQLFLASFLS
Sbjct: 1 MERIAIICLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHQVQAPAYVIGDPHFAAKYDPVKPTAYAWNVKIHFNPSQLFLASFLS 234
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A067GBA1|A0A067GBA1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026705mg PE=4 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 1.488e-158 Identity = 216/219 (98.63%), Postives = 216/219 (98.63%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVK 219
MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINH VQAPAYVIGDPPFAAKYDPVKPTAYAWN
Sbjct: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHQVQAPAYVIGDPPFAAKYDPVKPTAYAWNTN 219
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: V4UEE2|V4UEE2_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016622mg PE=4 SV=1) HSP 1 Score: 438.343 bits (1126), Expect = 5.822e-155 Identity = 213/219 (97.26%), Postives = 213/219 (97.26%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVK 219
MERIAI CLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRAL SNQGYSYDNDGEFLSDRLPLINH VQAPAYVIGDP FAAKYDPVKPTAYAWN
Sbjct: 1 MERIAIICLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALVSNQGYSYDNDGEFLSDRLPLINHQVQAPAYVIGDPHFAAKYDPVKPTAYAWNTN 219
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A6J1B6L2|A0A6J1B6L2_9ROSI (tetraspanin-19-like OS=Herrania umbratica OX=108875 GN=LOC110424539 PE=4 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 9.285e-99 Identity = 141/207 (68.12%), Postives = 166/207 (80.19%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYD 207
M RI +C+QS LK +NLIMG+VGI+MILYG WM+RVWQRDM G SFDDF S PWFI +F+G G+T C +TCLGHIAA SANGFCL YM+I +LLL+ETA+AAD+ LNS+WEKDLP+DPTGRFHDFK FV+SNFDIFKWIG+ II Q S LLAMA+RALG NQ +YD+D EF RLPLIN++ PAYVIGD PFA K +
Sbjct: 1 MSRIIKSCMQSILKGVNLIMGMVGIAMILYGFWMVRVWQRDMGGSSFDDFNSTAPWFIYTFLGTGITLCFLTCLGHIAADSANGFCLCCYMVIISVLLLVETAMAADVLLNSDWEKDLPEDPTGRFHDFKAFVQSNFDIFKWIGLLIILGQGLSVLLAMAIRALGPNQCSNYDSDEEFTPARLPLINNNAPQPAYVIGDSPFANKNE 207
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A061GFU4|A0A061GFU4_THECC (Tetraspanin family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029897 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.020e-98 Identity = 144/219 (65.75%), Postives = 169/219 (77.17%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVK 219
M RI +C+QS LK +NLIMG+VGI+MILYG WM+RVWQRDM G FDDF S PWFI +F+G G+T C +TCLGHIAA SANGFCL YM+I +LLL+ETAIAADI LNS+WEKDLP+DPTGRFHDFK+FV+SNFDIFKWIG+ II Q S LLAMA+RALG NQ +YD+D EF RLPLIN++ PAYV+GD PFA K + AWN
Sbjct: 1 MARILKSCMQSILKGVNLIMGMVGIAMILYGFWMVRVWQRDMGGSPFDDFNSTAPWFIYTFLGTGITLCFLTCLGHIAADSANGFCLFGYMVIISVLLLVETAIAADILLNSDWEKDLPEDPTGRFHDFKEFVQSNFDIFKWIGLLIILGQGISVLLAMAIRALGPNQCSNYDSDEEFPPARLPLINNNAPQPAYVVGDSPFANKSE-------AWNTS 212
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A5D2EV47|A0A5D2EV47_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G028800v1 PE=4 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 5.262e-97 Identity = 147/232 (63.36%), Postives = 171/232 (73.71%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHFNP---SQLFL 229
M RI +CLQS LK +NLIM +VGI+MILYG WM+R+WQRDM G SFDDF S PWFI +F+G G+T CL+TCLGHIAA +ANGFCL YM+I +LLL+ET IAAD+ LNSEWEKDLP+DPTGRFHDFK+FV+SN DIFKWIG I Q S L AMALRA G NQ +YD+D EF RLPLIN+H Q PAYVI DPPFA K + AWNV SQ+F+
Sbjct: 1 MARIIKSCLQSALKCVNLIMAMVGIAMILYGFWMVRIWQRDMGGSSFDDFNSTAPWFIYTFLGTGITLCLLTCLGHIAADTANGFCLFCYMVIISVLLLVETGIAADVLLNSEWEKDLPEDPTGRFHDFKEFVESNIDIFKWIGFIIFLGQGLSVLSAMALRACGPNQCSNYDSDEEFNQTRLPLINNHPQQPAYVIVDPPFANKNE-------AWNVNEQVKEKGVSQIFI 225
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A1U8L9X5|A0A1U8L9X5_GOSHI (tetraspanin-19-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107925279 PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 7.306e-97 Identity = 147/232 (63.36%), Postives = 171/232 (73.71%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHFNP---SQLFL 229
M RI +CLQS LK +NLIM +VGI+MILYG WM+R+WQRDM G SFDDF S PWFI +F+G G+T CL+TCLGHIAA +ANGFCL YM+I +LLL+ET IAAD+ LNSEWEKDLP+DPTGRFHDFK+FV+SN DIFKWIG I Q S L AMALRA G NQ +YD+D EF RLPLIN+H Q PAYVI DPPFA K + AWNV SQ+F+
Sbjct: 1 MARIIKSCLQSALKCVNLIMAMVGIAMILYGFWMVRIWQRDMGGSSFDDFNSTAPWFIYTFLGTGITLCLLTCLGHIAADTANGFCLFCYMVIISVLLLVETGIAADVLLNSEWEKDLPEDPTGRFHDFKEFVESNIDIFKWIGFIIFLGQGLSVLSAMALRACGPNQCSNYDSDEEFNQARLPLINNHPQQPAYVIVDPPFANKNE-------AWNVNEQVKEKDVSQIFI 225
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A5D2EWD2|A0A5D2EWD2_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G028800v1 PE=4 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 7.551e-97 Identity = 145/222 (65.32%), Postives = 167/222 (75.23%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHF 222
M RI +CLQS LK +NLIM +VGI+MILYG WM+R+WQRDM G SFDDF S PWFI +F+G G+T CL+TCLGHIAA +ANGFCL YM+I +LLL+ET IAAD+ LNSEWEKDLP+DPTGRFHDFK+FV+SN DIFKWIG I Q S L AMALRA G NQ +YD+D EF RLPLIN+H Q PAYVI DPPFA K + AWNV F
Sbjct: 1 MARIIKSCLQSALKCVNLIMAMVGIAMILYGFWMVRIWQRDMGGSSFDDFNSTAPWFIYTFLGTGITLCLLTCLGHIAADTANGFCLFCYMVIISVLLLVETGIAADVLLNSEWEKDLPEDPTGRFHDFKEFVESNIDIFKWIGFIIFLGQGLSVLSAMALRACGPNQCSNYDSDEEFNQTRLPLINNHPQQPAYVIVDPPFANKNE-------AWNVSKPF 215
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Match: A0A2P5WWG2|A0A2P5WWG2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA25239 PE=4 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 1.003e-96 Identity = 145/222 (65.32%), Postives = 167/222 (75.23%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIHF 222
M RI +CLQS LK +NLIM +VGI+MILYG WM+R+WQRDM G SFDDF S PWFI +F+G G+T CL+TCLGHIAA +ANGFCL YM+I +LLL+ET IAAD+ LNSEWEKDLP+DPTGRFHDFK+FV+SN DIFKWIG I Q S L AMALRA G NQ +YD+D EF RLPLIN+H Q PAYVI DPPFA K + AWNV F
Sbjct: 68 MARIIKSCLQSALKCVNLIMAMVGIAMILYGFWMVRIWQRDMGGSSFDDFNSTAPWFIYTFLGTGITLCLLTCLGHIAADTANGFCLFCYMVIISVLLLVETGIAADVLLNSEWEKDLPEDPTGRFHDFKEFVESNIDIFKWIGFIIFLGQGLSVLSAMALRACGPNQCSNYDSDEEFNQTRLPLINNHPQQPAYVIVDPPFANKNE-------AWNVSKPF 282
BLAST of CMJ_chr2_004990.1 vs. ExPASy Swiss-Prot
Match: TET19_ARATH (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 6.772e-67 Identity = 102/220 (46.36%), Postives = 138/220 (62.73%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKI 220
M RI +CLQS LK +N ++G+VGI+MILY +W+IR WQ M F D PWFI SF+G+G C++TC GHIAA + NG CL YM LL ++E + ADI LN +W+KD P+DP+G FH F KF++SNF I KWIG+ I+ Q S L+AM L+ALG + YD+D E+ + L+ Q P YV+G+P + AK AW V++
Sbjct: 1 MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAK-------PGAWTVRL 213
BLAST of CMJ_chr2_004990.1 vs. ExPASy Swiss-Prot
Match: TET18_ARATH (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.149e-32 Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = 0 Query: 11 SFLKALNLIMGIVGISMILYGIWMIRVWQRDME-----------------------GQSFDDFCSI-------------------NPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSN 167
S LK LN + +G+S+I+Y IWM+ + R + D SI PWFI SF+ +G+ C++T +G IAA + NG CL FY ++ LL+LLE A+ A I ++ WEKDLP DPTG + F++ N DI KW+GI +++ Q+ S LLAM LRA+ S
Sbjct: 12 STLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSEPLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVST 210
BLAST of CMJ_chr2_004990.1 vs. ExPASy Swiss-Prot
Match: TET20_ARATH (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.251e-27 Identity = 53/124 (42.74%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 55 PWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEF 178
PWFI F+ IG+ C++T +G IAA + NG CL FY ++ LL+++E A+ I ++ WEKDLP DPTG + + F++ N DI KW+GI +++ Q+ S LLA+ LRA+ S + D++ +F
Sbjct: 109 PWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDF 232
BLAST of CMJ_chr2_004990.1 vs. ExPASy Swiss-Prot
Match: TOM2A_ARATH (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.169e-18 Identity = 72/256 (28.12%), Postives = 116/256 (45.31%), Query Frame = 0 Query: 8 CLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEG----------QSFDDFCSI----------------NPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIH-----------FNPSQ 226
CL+ LK LN ++ + G+ MI YGI++ ++R + QS+ F WFI FIGIGV +I+C G + S + CLS Y L+ LL+L+E AA I ++ W +LP D TG F F++ N+ I +W+ + + + LLA+ +RA +N YD+D E+L+ R + + A + P A D + W+ ++ +NPS+
Sbjct: 6 CLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 259
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT2G20740.1 (| Tetraspanin family protein | Chr2:8935788-8937292 FORWARD LENGTH=221 | 201606) HSP 1 Score: 208.764 bits (530), Expect = 6.928e-68 Identity = 102/220 (46.36%), Postives = 138/220 (62.73%), Query Frame = 0 Query: 1 MERIAITCLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEGQSFDDFCSINPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKI 220
M RI +CLQS LK +N ++G+VGI+MILY +W+IR WQ M F D PWFI SF+G+G C++TC GHIAA + NG CL YM LL ++E + ADI LN +W+KD P+DP+G FH F KF++SNF I KWIG+ I+ Q S L+AM L+ALG + YD+D E+ + L+ Q P YV+G+P + AK AW V++
Sbjct: 1 MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAK-------PGAWTVRL 213
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT2G20740.2 (| Tetraspanin family protein | Chr2:8935911-8937292 FORWARD LENGTH=180 | 201606) HSP 1 Score: 159.458 bits (402), Expect = 5.718e-49 Identity = 76/166 (45.78%), Postives = 104/166 (62.65%), Query Frame = 0 Query: 55 PWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKI 220
PWFI SF+G+G C++TC GHIAA + NG CL YM LL ++E + ADI LN +W+KD P+DP+G FH F KF++SNF I KWIG+ I+ Q S L+AM L+ALG + YD+D E+ + L+ Q P YV+G+P + AK AW V++
Sbjct: 14 PWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAK-------PGAWTVRL 172
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT2G20230.1 (| Tetraspanin family protein | Chr2:8725762-8727388 FORWARD LENGTH=270 | 201606) HSP 1 Score: 122.479 bits (306), Expect = 1.175e-33 Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = 0 Query: 11 SFLKALNLIMGIVGISMILYGIWMIRVWQRDME-----------------------GQSFDDFCSI-------------------NPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSN 167
S LK LN + +G+S+I+Y IWM+ + R + D SI PWFI SF+ +G+ C++T +G IAA + NG CL FY ++ LL+LLE A+ A I ++ WEKDLP DPTG + F++ N DI KW+GI +++ Q+ S LLAM LRA+ S
Sbjct: 12 STLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSEPLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVST 210
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT2G20740.3 (| Tetraspanin family protein | Chr2:8936713-8937292 FORWARD LENGTH=131 | 201606) HSP 1 Score: 110.538 bits (275), Expect = 1.561e-30 Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 0 Query: 91 MLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKI 220
M LL ++E + ADI LN +W+KD P+DP+G FH F KF++SNF I KWIG+ I+ Q S L+AM L+ALG + YD+D E+ + L+ Q P YV+G+P + AK AW V++
Sbjct: 1 MGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAK-------PGAWTVRL 123
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT4G28770.1 (| Tetraspanin family protein | Chr4:14212177-14213518 REVERSE LENGTH=281 | 201606) HSP 1 Score: 108.612 bits (270), Expect = 3.326e-28 Identity = 53/124 (42.74%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 55 PWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEF 178
PWFI F+ IG+ C++T +G IAA + NG CL FY ++ LL+++E A+ I ++ WEKDLP DPTG + + F++ N DI KW+GI +++ Q+ S LLA+ LRA+ S + D++ +F
Sbjct: 109 PWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDF 232
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT4G28770.2 (| Tetraspanin family protein | Chr4:14212177-14213896 REVERSE LENGTH=325 | 201606) HSP 1 Score: 108.997 bits (271), Expect = 5.544e-28 Identity = 53/124 (42.74%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 55 PWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEF 178
PWFI F+ IG+ C++T +G IAA + NG CL FY ++ LL+++E A+ I ++ WEKDLP DPTG + + F++ N DI KW+GI +++ Q+ S LLA+ LRA+ S + D++ +F
Sbjct: 153 PWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDF 276
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT1G32400.3 (| tobamovirus multiplication 2A | Chr1:11689393-11690873 REVERSE LENGTH=280 | 201606) HSP 1 Score: 83.5741 bits (205), Expect = 7.335e-19 Identity = 72/256 (28.12%), Postives = 116/256 (45.31%), Query Frame = 0 Query: 8 CLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEG----------QSFDDFCSI----------------NPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIH-----------FNPSQ 226
CL+ LK LN ++ + G+ MI YGI++ ++R + QS+ F WFI FIGIGV +I+C G + S + CLS Y L+ LL+L+E AA I ++ W +LP D TG F F++ N+ I +W+ + + + LLA+ +RA +N YD+D E+L+ R + + A + P A D + W+ ++ +NPS+
Sbjct: 6 CLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 259
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT1G32400.2 (| tobamovirus multiplication 2A | Chr1:11689393-11690873 REVERSE LENGTH=280 | 201606) HSP 1 Score: 83.5741 bits (205), Expect = 7.335e-19 Identity = 72/256 (28.12%), Postives = 116/256 (45.31%), Query Frame = 0 Query: 8 CLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEG----------QSFDDFCSI----------------NPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIH-----------FNPSQ 226
CL+ LK LN ++ + G+ MI YGI++ ++R + QS+ F WFI FIGIGV +I+C G + S + CLS Y L+ LL+L+E AA I ++ W +LP D TG F F++ N+ I +W+ + + + LLA+ +RA +N YD+D E+L+ R + + A + P A D + W+ ++ +NPS+
Sbjct: 6 CLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 259
BLAST of CMJ_chr2_004990.1 vs. Araport11
Match: AT1G32400.1 (| tobamovirus multiplication 2A | Chr1:11689393-11690873 REVERSE LENGTH=280 | 201606) HSP 1 Score: 83.5741 bits (205), Expect = 7.335e-19 Identity = 72/256 (28.12%), Postives = 116/256 (45.31%), Query Frame = 0 Query: 8 CLQSFLKALNLIMGIVGISMILYGIWMIRVWQRDMEG----------QSFDDFCSI----------------NPWFICSFIGIGVTFCLITCLGHIAAASANGFCLSFYMLITCLLLLLETAIAADIQLNSEWEKDLPDDPTGRFHDFKKFVKSNFDIFKWIGIWIISAQVSSALLAMALRALGSNQGYSYDNDGEFLSDRLPLINHHVQAPAYVIGDPPFAAKYDPVKPTAYAWNVKIH-----------FNPSQ 226
CL+ LK LN ++ + G+ MI YGI++ ++R + QS+ F WFI FIGIGV +I+C G + S + CLS Y L+ LL+L+E AA I ++ W +LP D TG F F++ N+ I +W+ + + + LLA+ +RA +N YD+D E+L+ R + + A + P A D + W+ ++ +NPS+
Sbjct: 6 CLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 259 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_004990.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_004990.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_004990.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 9 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_004990.1_cmj_v1 ID=CMJ_chr2_004990.1_cmj_v1; Name=CMJ_chr2_004990.1; organism=Citrus maxima; type=mRNA; length=705bpback to top protein sequence of CMJ_chr2_004990.1_cmj_v1 >CMJ_chr2_004990.1_cmj_v1 ID=CMJ_chr2_004990.1_cmj_v1; Name=CMJ_chr2_004990.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=235bpback to top mRNA from alignment at chr2:2913255..2914920+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1666bp; location=Sequence derived from: chr2:2913255..2914920+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:2913255..2914920+ >CMJ_chr2_004990.1_cmj_v1 ID=CMJ_chr2_004990.1_cmj_v1; Name=CMJ_chr2_004990.1; organism=Citrus maxima; type=CDS; length=705bp; location=Sequence derived from: chr2:2913255..2914920+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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