CMJ_chr2_006220.2
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A067GJL0|A0A067GJL0_CITSI (BHLH domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026702mg PE=4 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 5.420e-101 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK
Sbjct: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A2H5N2U4|A0A2H5N2U4_CITUN (BHLH domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_010390 PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 2.076e-98 Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
MSSPYNSNWIFDCGLLD IGVSGGDLPSLDPPEVLWSSSTSNPPLSAEF+DSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNE LLGKINELK
Sbjct: 1 MSSPYNSNWIFDCGLLDGIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFDDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELK 147
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: V4UJ84|V4UJ84_CITCL (BHLH domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10016511mg PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 2.076e-98 Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
MSSPYNSNWIFDCGLLD IGVSGGDLPSLDPPEVLWSSSTSNPPLSAEF+DSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNE LLGKINELK
Sbjct: 1 MSSPYNSNWIFDCGLLDGIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFDDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELK 147
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A2H5N210|A0A2H5N210_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_010390 PE=4 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.023e-72 Identity = 118/147 (80.27%), Postives = 119/147 (80.95%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
MSSPYNSNWIFDCGLLD IGVSGGDLPSLDPPEVLWSSSTSNPPLSAEF+DSFGNLDAFKETGSRK RFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNE LLGKINELK
Sbjct: 1 MSSPYNSNWIFDCGLLDGIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFDDSFGNLDAFKETGSRK--------------------------RFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNENLLGKINELK 121
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A6J1B785|A0A6J1B785_9ROSI (transcription factor ILR3-like OS=Herrania umbratica OX=108875 GN=LOC110424201 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.944e-66 Identity = 111/155 (71.61%), Postives = 123/155 (79.35%), Query Frame = 0 Query: 1 MSSPYNSNWIFD-CGLLDDIGVSGGDLPSLDPPEVLWSSST---SNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
+SS + WIFD GLL+DI V GGDLPSLDP +WSS + S PPLS EFN+SFGN D+ ETGSRKR RSGSCSASGSKACREKMRRDRLNDRF+EL SILDPGRP K+DK V+L DAV+MVTQLRDEAQKL+ SNE L KINELK N
Sbjct: 12 VSSENPNTWIFDDYGLLEDIPVPGGDLPSLDPAAPIWSSQSLACSTPPLSVEFNESFGNSDSLNETGSRKRARSGSCSASGSKACREKMRRDRLNDRFLELGSILDPGRPLKVDKAVILVDAVRMVTQLRDEAQKLRESNESLQEKINELKAEKN 166
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A2P5CVA0|A0A2P5CVA0_PARAD (Basic helix-loop-helix transcription factor OS=Parasponia andersonii OX=3476 GN=PanBHLH44 PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.454e-65 Identity = 109/176 (61.93%), Postives = 127/176 (72.16%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSS--TSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFNFV------ISCSSHIVECNVSAL 168
M S N NW+FD L++D+GV GGDLPSL+PP W S T+ LS EF++SF N D KETGSRKRVR GSCSASGSKACREKMRR++LNDRF+EL SILDPGRPPKMDK V+L D V+MVTQLR E+QKLK SNE L KINELKV N + + I++ V AL
Sbjct: 1 MGSGGNPNWVFDYSLIEDLGVPGGDLPSLEPPGFTWPSHSFTAQTDLSVEFDESFANDDVLKETGSRKRVRPGSCSASGSKACREKMRREKLNDRFLELGSILDPGRPPKMDKAVILGDVVRMVTQLRKESQKLKESNESLQEKINELKVEKNELRDEKQRLKAEKDILDKQVKAL 176
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A2P5ERJ7|A0A2P5ERJ7_TREOI (Basic helix-loop-helix transcription factor OS=Trema orientale OX=63057 GN=TorBHLH44 PE=4 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 3.332e-65 Identity = 109/176 (61.93%), Postives = 127/176 (72.16%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSS--TSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFNFV------ISCSSHIVECNVSAL 168
M S N NW+FD L++D+GV GGDLPSL+PP W S T+ LS EF++SF D KETGSRKRVR GSCSASGSKACREKMRRD+LNDRF+EL SILDPGRPPKMDK V+L DAV+MVTQLR E+QKLK SNE L KI+ELKV N + + I++ V AL
Sbjct: 1 MGSVGNPNWVFDYSLIEDLGVPGGDLPSLEPPGFTWPSHSFTAQTDLSVEFDESFAKDDGLKETGSRKRVRPGSCSASGSKACREKMRRDKLNDRFLELGSILDPGRPPKMDKAVILGDAVRMVTQLRKESQKLKESNESLQEKIHELKVEKNELRDEKQRLKAEKDILDKQVKAL 176
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: B9RXU9|B9RXU9_RICCO (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0906490 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.565e-60 Identity = 107/175 (61.14%), Postives = 126/175 (72.00%), Query Frame = 0 Query: 1 MSSPY-NSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFNFV------ISCSSHIVECNVSAL 168
M SP N+NW FD GL++DI V GGDLPSLDP LWSS P LS EF+DS G+ ++ GSRKRVR GSCS GSKACREKMRRD+LNDRFMEL ++LDPGRPPKMDK+V+LADA++MV QLR EAQKLK SNE L K+NELKV N + + +E V+AL
Sbjct: 1 MVSPSDNANWAFDYGLIEDIPVPGGDLPSLDP---LWSS----PSLSVEFDDSLGSSQCLRDNGSRKRVRPGSCSGLGSKACREKMRRDKLNDRFMELGALLDPGRPPKMDKSVILADAMKMVNQLRAEAQKLKESNENLQEKVNELKVEKNELRDEKQRLKTEKESIERQVNAL 168
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A540MZB6|A0A540MZB6_MALBA (BHLH domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_010260 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.259e-58 Identity = 96/152 (63.16%), Postives = 111/152 (73.03%), Query Frame = 0 Query: 2 SSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPL--SAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
S P N NW+ D G++DDI V GG+LPSLDPP W + P S EF+DSFGN D KETG RKR R+GSC+ SGSKACREKMRRDRLNDRF+EL+SIL+PGRPPK DK +L DA QMVTQLR EAQ+LK S+ L I+ELK N
Sbjct: 3 SPPQNPNWVLDYGVIDDILVPGGELPSLDPPGFSWPDHSFAGPTAPSVEFDDSFGNPDGMKETGLRKRARTGSCNVSGSKACREKMRRDRLNDRFVELSSILEPGRPPKTDKVAILGDAAQMVTQLRGEAQQLKESSANLQETIDELKAEKN 154
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Match: A0A540KTA4|A0A540KTA4_MALBA (BHLH domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_037193 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.566e-58 Identity = 97/152 (63.82%), Postives = 112/152 (73.68%), Query Frame = 0 Query: 2 SSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPL--SAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
S P N NW+FD G+++DI V GG+LPSLDPP W + P S EF+DSFGN D+ KETG RKR R+GS S SGSKACREKMRRDRLNDRF EL+SIL+PGRPPK DK +L DAV+MVTQLR EAQ+LK S+ L INELK N
Sbjct: 3 SPPQNPNWVFDYGVIEDILVPGGELPSLDPPGFSWPDHSFAGPTAPSTEFDDSFGNPDSMKETGLRKRARTGSNSVSGSKACREKMRRDRLNDRFAELSSILEPGRPPKTDKVAILGDAVRMVTQLRGEAQQLKESSANLQETINELKAEKN 154
BLAST of CMJ_chr2_006220.2 vs. ExPASy Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.399e-39 Identity = 84/152 (55.26%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLD-DIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
M SP N+NWI C L+D D G P P +SN SA + S GN +A KE GS+KR R S SA+ SKACREK RRDRLND+FMEL +IL+PG PPK DK +L DAV+MVTQLR EAQKLK SN L KI ELK N
Sbjct: 1 MVSPENANWI--CDLIDADYGSFTIQGPGFSWPVQQPIGVSSN--SSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKN 148
BLAST of CMJ_chr2_006220.2 vs. ExPASy Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.804e-36 Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
M SP N+NW+ D L++ G P+ P + S+T +S E + + D KE SRKR+++ SC+ S SKACREK RRDRLND+F EL+S+L+PGR PK DK ++ DA++MV Q RDEAQKLK N L KI ELK
Sbjct: 1 MVSPENTNWLSDYPLIE--GAFSDQNPTF--PWQIDGSAT----VSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELK 139
BLAST of CMJ_chr2_006220.2 vs. ExPASy Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.453e-29 Identity = 51/92 (55.43%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 57 DAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKV 148
+ F+E S KR R+GSCS G+KACREK+RR++LND+FM+L+S+L+PGR PK DK+ +L DA+++V QLR EA +L+ +N+KLL +I LK
Sbjct: 145 EEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKA 236
BLAST of CMJ_chr2_006220.2 vs. ExPASy Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.115e-27 Identity = 51/89 (57.30%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 64 SRKRVRSGSCS-ASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
SRKR R+GSCS G+KACRE++RR++LN+RFM+L+S+L+PGR PK DK +L DA++++ QLRDEA KL+ +N+KLL +I LK N
Sbjct: 119 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKN 207
BLAST of CMJ_chr2_006220.2 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.532e-10 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 79 KACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINEL 146
KA REK+RR++LN+ F+EL ++LDP R PK DK +L D VQ++ +L E KLK L + EL
Sbjct: 63 KAGREKLRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESREL 129
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT5G54680.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:22217270-22218993 FORWARD LENGTH=234 | 201606) HSP 1 Score: 137.117 bits (344), Expect = 1.431e-40 Identity = 84/152 (55.26%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLD-DIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
M SP N+NWI C L+D D G P P +SN SA + S GN +A KE GS+KR R S SA+ SKACREK RRDRLND+FMEL +IL+PG PPK DK +L DAV+MVTQLR EAQKLK SN L KI ELK N
Sbjct: 1 MVSPENANWI--CDLIDADYGSFTIQGPGFSWPVQQPIGVSSN--SSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKN 148
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT1G51070.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr1:18928018-18929513 FORWARD LENGTH=226 | 201606) HSP 1 Score: 127.487 bits (319), Expect = 5.938e-37 Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 0 Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
M SP N+NW+ D L++ G P+ P + S+T +S E + + D KE SRKR+++ SC+ S SKACREK RRDRLND+F EL+S+L+PGR PK DK ++ DA++MV Q RDEAQKLK N L KI ELK
Sbjct: 1 MVSPENTNWLSDYPLIE--GAFSDQNPTF--PWQIDGSAT----VSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELK 139
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT1G51070.2 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr1:18928018-18929513 FORWARD LENGTH=292 | 201606) HSP 1 Score: 117.857 bits (294), Expect = 1.927e-32 Identity = 64/119 (53.78%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 29 LDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELK 147
L P EV S S S E + + D KE SRKR+++ SC+ S SKACREK RRDRLND+F EL+S+L+PGR PK DK ++ DA++MV Q RDEAQKLK N L KI ELK
Sbjct: 87 LFPKEVDESRSLPIAKGSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELK 205
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT3G23210.2 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:8283255-8284657 REVERSE LENGTH=291 | 201606) HSP 1 Score: 111.694 bits (278), Expect = 3.609e-30 Identity = 51/92 (55.43%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 57 DAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKV 148
+ F+E S KR R+GSCS G+KACREK+RR++LND+FM+L+S+L+PGR PK DK+ +L DA+++V QLR EA +L+ +N+KLL +I LK
Sbjct: 116 EEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKA 207
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT3G23210.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:8283255-8284915 REVERSE LENGTH=320 | 201606) HSP 1 Score: 111.694 bits (278), Expect = 5.579e-30 Identity = 51/92 (55.43%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 57 DAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKV 148
+ F+E S KR R+GSCS G+KACREK+RR++LND+FM+L+S+L+PGR PK DK+ +L DA+++V QLR EA +L+ +N+KLL +I LK
Sbjct: 145 EEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKA 236
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT4G14410.3 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr4:8300418-8301503 FORWARD LENGTH=277 | 201606) HSP 1 Score: 107.457 bits (267), Expect = 1.092e-28 Identity = 51/89 (57.30%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 64 SRKRVRSGSCS-ASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
SRKR R+GSCS G+KACRE++RR++LN+RFM+L+S+L+PGR PK DK +L DA++++ QLRDEA KL+ +N+KLL +I LK N
Sbjct: 113 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKN 201
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT4G14410.2 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr4:8300418-8301503 FORWARD LENGTH=277 | 201606) HSP 1 Score: 107.457 bits (267), Expect = 1.092e-28 Identity = 51/89 (57.30%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 64 SRKRVRSGSCS-ASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
SRKR R+GSCS G+KACRE++RR++LN+RFM+L+S+L+PGR PK DK +L DA++++ QLRDEA KL+ +N+KLL +I LK N
Sbjct: 113 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKN 201
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT4G14410.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr4:8300077-8301503 FORWARD LENGTH=283 | 201606) HSP 1 Score: 107.457 bits (267), Expect = 1.141e-28 Identity = 51/89 (57.30%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 64 SRKRVRSGSCS-ASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKVCFN 151
SRKR R+GSCS G+KACRE++RR++LN+RFM+L+S+L+PGR PK DK +L DA++++ QLRDEA KL+ +N+KLL +I LK N
Sbjct: 119 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKN 207
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT3G19860.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:6904579-6905863 FORWARD LENGTH=284 | 201606) HSP 1 Score: 61.6178 bits (148), Expect = 1.402e-11 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 79 KACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINEL 146
KA REK+RR++LN+ F+EL ++LDP R PK DK +L D VQ++ +L E KLK L + EL
Sbjct: 10 KAGREKLRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESREL 76
BLAST of CMJ_chr2_006220.2 vs. Araport11
Match: AT3G19860.2 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:6903842-6905863 FORWARD LENGTH=337 | 201606) HSP 1 Score: 62.003 bits (149), Expect = 1.568e-11 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 79 KACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINEL 146
KA REK+RR++LN+ F+EL ++LDP R PK DK +L D VQ++ +L E KLK L + EL
Sbjct: 63 KAGREKLRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESREL 129 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_006220.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006220.2 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 5 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006220.2 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_006220.2_cmj_v1 ID=CMJ_chr2_006220.2_cmj_v1; Name=CMJ_chr2_006220.2; organism=Citrus maxima; type=mRNA; length=516bpback to top protein sequence of CMJ_chr2_006220.2_cmj_v1 >CMJ_chr2_006220.2_cmj_v1 ID=CMJ_chr2_006220.2_cmj_v1; Name=CMJ_chr2_006220.2_cmj_v1; organism=Citrus maxima; type=polypeptide; length=172bpback to top mRNA from alignment at chr2:3813964..3816641+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2678bp; location=Sequence derived from: chr2:3813964..3816641+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:3813964..3816641+ >CMJ_chr2_006220.2_cmj_v1 ID=CMJ_chr2_006220.2_cmj_v1; Name=CMJ_chr2_006220.2; organism=Citrus maxima; type=CDS; length=516bp; location=Sequence derived from: chr2:3813964..3816641+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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