CMJ_chr2_006320.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067GAD5|A0A067GAD5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.618e-48 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 98.9821 bits (245), Expect = 1.755e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 301
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067G7L6|A0A067G7L6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 2.092e-47 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 99.3673 bits (246), Expect = 1.437e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 301
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067G7I0|A0A067G7I0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.323e-47 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 98.9821 bits (245), Expect = 1.685e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 301
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067GJH1|A0A067GJH1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.866e-47 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 99.3673 bits (246), Expect = 1.552e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 301
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067GJS9|A0A067GJS9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.543e-47 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 98.9821 bits (245), Expect = 2.135e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 301
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067GAD0|A0A067GAD0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.173e-46 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 96.2857 bits (238), Expect = 2.181e-20 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAP 125
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAP
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAP 300
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A067G7L0|A0A067G7L0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005156mg PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.620e-46 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK
Sbjct: 24 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 107 HSP 2 Score: 98.5969 bits (244), Expect = 2.842e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG
Sbjct: 259 RCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 301
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: V4UJ65|V4UJ65_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10014852mg PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 8.154e-45 Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLH LSIVSSVMSQY EEDMVLSC+VSNNTASNTFTSNLNILFNQ+LHSEAGK
Sbjct: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHFLSIVSSVMSQYVVEEDMVLSCSVSNNTASNTFTSNLNILFNQRLHSEAGK 84 HSP 2 Score: 90.8929 bits (224), Expect = 1.235e-18 Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPG GFGRILFPSCIMGFEL+ YSKVPAVGALAPSSAPG
Sbjct: 236 RCFDPPGTGFGRILFPSCIMGFELHPYSKVPAVGALAPSSAPG 278
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: V4UDV7|V4UDV7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10014852mg PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.834e-44 Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0 Query: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
MELNRAFISEVKSYRRTMPTAANLASQAIRWLH LSIVSSVMSQY EEDMVLSC+VSNNTASNTFTSNLNILFNQ+LHSEAGK
Sbjct: 1 MELNRAFISEVKSYRRTMPTAANLASQAIRWLHFLSIVSSVMSQYVVEEDMVLSCSVSNNTASNTFTSNLNILFNQRLHSEAGK 84 HSP 2 Score: 91.2781 bits (225), Expect = 1.005e-18 Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPG GFGRILFPSCIMGFEL+ YSKVPAVGALAPSSAPG
Sbjct: 236 RCFDPPGTGFGRILFPSCIMGFELHPYSKVPAVGALAPSSAPG 278
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Match: A0A2H5N1V3|A0A2H5N1V3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_010290 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.428e-36 Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0 Query: 11 VKSYRRTMPTAANLASQAIRWLHLLSIVSSVMSQYFAEEDMVLSCAVSNNTASNTFTSNLNILFNQKLHSEAGK 84
VKSYRRTMPTAANLASQAIRWLH LSIVSSVMSQY EEDMVLSC+VSNNTASNTFTSNLNILFNQKLH+EAGK
Sbjct: 816 VKSYRRTMPTAANLASQAIRWLHFLSIVSSVMSQYVVEEDMVLSCSVSNNTASNTFTSNLNILFNQKLHTEAGK 889 HSP 2 Score: 91.6633 bits (226), Expect = 1.053e-18 Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0 Query: 84 KCFDPPGMGFGRILFPSCIMGFELYRYSKVPAVGALAPSSAPG 126
+CFDPPG GFGRILFPSCIMGFEL+ YSKVPAVGALAPSSAPG
Sbjct: 1041 RCFDPPGTGFGRILFPSCIMGFELHSYSKVPAVGALAPSSAPG 1083 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006320.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_006320.1_cmj_v1 ID=CMJ_chr2_006320.1_cmj_v1; Name=CMJ_chr2_006320.1; organism=Citrus maxima; type=mRNA; length=393bpback to top protein sequence of CMJ_chr2_006320.1_cmj_v1 >CMJ_chr2_006320.1_cmj_v1 ID=CMJ_chr2_006320.1_cmj_v1; Name=CMJ_chr2_006320.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=131bpback to top mRNA from alignment at chr2:3899881..3900729- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=849bp; location=Sequence derived from: chr2:3899881..3900729- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:3899881..3900729- >CMJ_chr2_006320.1_cmj_v1 ID=CMJ_chr2_006320.1_cmj_v1; Name=CMJ_chr2_006320.1; organism=Citrus maxima; type=CDS; length=393bp; location=Sequence derived from: chr2:3899881..3900729- (Citrus maximaback to top |