CMJ_chr2_006390.1
|
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: V4TPA5|V4TPA5_CITCL (LEA_2 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10017613mg PE=4 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 3.362e-164 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIH FSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNS RWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT
Sbjct: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSGRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A2H5N347|A0A2H5N347_CITUN (LEA_2 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_010230 PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.032e-162 Identity = 220/223 (98.65%), Postives = 220/223 (98.65%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIH FSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNS RWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFIL AYKDKRCPLYFT
Sbjct: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSGRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILLAYKDKRCPLYFT 223
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A067GJR7|A0A067GJR7_CITSI (LEA_2 domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g042582mg PE=4 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 6.784e-136 Identity = 187/189 (98.94%), Postives = 188/189 (99.47%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD 189
MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIH FSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQ+VGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Sbjct: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD 189
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A6J1B5W3|A0A6J1B5W3_9ROSI (NDR1/HIN1-like protein 10 OS=Herrania umbratica OX=108875 GN=LOC110424526 PE=4 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 8.198e-113 Identity = 155/230 (67.39%), Postives = 182/230 (79.13%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQN-------QPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
M + DRLP+R Q QP+KRH+TAR+YAHRVRES T RV+KTLC IFLSLLLV GI++F+L+LSLRPHRPR + F++P LAQP+GFENA+I FNVTARN NQH+GIY+DS+ GSVYYK+QR+G+TPL D FFQEPKTTTI++ T ATLTVNS RW EFM DR QG V FRL+I S IRF+VSTWDSK H MH CDV VG DG ILP KDKRCP+YF+
Sbjct: 1 MSNGDRLPIRYAQQEFQPQRQPQPMKRHHTARHYAHRVRESFTARVTKTLCAIFLSLLLVVGIVMFILWLSLRPHRPRFHMMEFTVPGLAQPSGFENAQITFNVTARNPNQHIGIYYDSMVGSVYYKDQRIGSTPLLDPFFQEPKTTTIVYGTFDAATLTVNSNRWKEFMDDRQQGTVVFRLDITSVIRFKVSTWDSKHHKMHVNCDVAVGPDGMILPTSKDKRCPVYFS 230
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A6J1GSN4|A0A6J1GSN4_CUCMO (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111457132 PE=4 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 1.878e-110 Identity = 148/225 (65.78%), Postives = 185/225 (82.22%), Query Frame = 0 Query: 1 MHSTDRLPVR--STPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
MHS +LPV +TP+++PIKRH+TARYY HRV+ESLTTR+SK +C IFLSLLL+ GII F+L+LSLRPHRPR FIH FS+P L GFENA+I FNVTARNSN ++GIY+ S+ GSVYY++Q++G+TPL D++++ PKTT +L A LSGATL +N+ RWMEF +DR +G V FRLEI STIRF++STWDSKRH MHA CDV VG DG ILP+ +D RCP+YFT
Sbjct: 1 MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 225
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A2C9U4E7|A0A2C9U4E7_MANES (LEA_2 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_17G029200 PE=4 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.543e-110 Identity = 151/223 (67.71%), Postives = 182/223 (81.61%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
M++ RLP+RS + IKR +TARYYAHRVRESLTTRVSK +C IFL +L V GI+ F+L+LSLRPHRPRI+IH FSIP L Q NGFENAEIIFNVTARNSNQH+G Y+D+V GSVYYK+QR+G TPL + F+QE K TTI++ LSGATLTVNS RWMEF++DR +G V FRL++ S IRF+VS+W SKRH MHA CDV V +G IL +YK+KRCP+YFT
Sbjct: 1 MNTPSRLPLRSGQEAPGIKRQHTARYYAHRVRESLTTRVSKLICAIFLIILFVLGIVAFILWLSLRPHRPRIYIHDFSIPGLGQANGFENAEIIFNVTARNSNQHIGFYYDNVVGSVYYKDQRIGDTPLLNPFYQEAKNTTIMYGVLSGATLTVNSHRWMEFLNDRSKGTVIFRLDVTSNIRFKVSSWSSKRHRMHANCDVGVDPNGSILASYKNKRCPVYFT 223
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A7J7D7B7|A0A7J7D7B7_TRIWF (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09G00241 PE=4 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.606e-110 Identity = 156/224 (69.64%), Postives = 186/224 (83.04%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQN-QPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
MH++DRLPV T Q +PI+RH+TARYYAHRVRESLTTRVSKT+C I LSLLL+ GI+ F+L+LSLRPHRPR IH FS+P L QP GFENA I FNVT RNSNQH+GIY+DS+ GS+YYK+Q +G+TPL D F+QEPK T +++ +SGATLTVNS+RW EF++DRGQG V FRL+I STIRF+VSTWDSK H MHA CD+ VG DG ILP KDKRCP+YFT
Sbjct: 1 MHNSDRLPVHYTQQEPRPIQRHHTARYYAHRVRESLTTRVSKTICSILLSLLLIFGIVTFILWLSLRPHRPRFHIHEFSVPGLDQPTGFENARITFNVTVRNSNQHIGIYYDSMAGSIYYKDQMIGSTPLLDPFYQEPKNTVVVYKEMSGATLTVNSQRWTEFLNDRGQGSVMFRLDITSTIRFKVSTWDSKHHRMHANCDLAVGPDGNILPTSKDKRCPVYFT 224
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A6J1K2E7|A0A6J1K2E7_CUCMA (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111490050 PE=4 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 3.695e-109 Identity = 147/225 (65.33%), Postives = 183/225 (81.33%), Query Frame = 0 Query: 1 MHSTDRLPVR--STPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
M S +LPV +TP+ +PIKRH+TARYY HRV+ESLTTR+SK +C IFLSLLL+ GII F+L+LSLRPHRPR FIH FS+P L GFENA+I FNVTARNSN ++GIY+ S+ GSVYY++Q++G+TPL D++++ PKTT +L A LSGATL +N+ RWMEF +DR +G V FRLEI STIRF++STWDSKRH MHA CDV VG DG ILP+ +D RCP+YFT
Sbjct: 1 MQSPSQLPVHHTNTPERRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEGPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSARDVRCPVYFT 225
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A5C7GRM3|A0A5C7GRM3_9ROSI (LEA_2 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026401 PE=4 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 8.698e-108 Identity = 150/219 (68.49%), Postives = 185/219 (84.47%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQN-QPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRC 218
M + +R+P++ TP+ QP++RH+TARYYAHRVRESL TRVSKT+CI FLS+LLV GI+ F+L+LSLRPHRPR IH FS+P L Q GFENA+I FNVTARNSNQH+GI + S+E VYY++Q+VG+ L D F+QEPKTTT+L ATLSGATLTV+SRRW EF++DRG+GK+GFRL+IKS +RF+VSTWD RHTMHATCDV VG +G+ILP KDKRC
Sbjct: 1 MPTPNRIPIQITPEKPQPLQRHHTARYYAHRVRESLATRVSKTICIGFLSILLVLGIVAFILWLSLRPHRPRFHIHEFSVPGLDQATGFENAQITFNVTARNSNQHIGINYYSMEAMVYYRDQQVGSIHLKDPFYQEPKTTTVLDATLSGATLTVSSRRWEEFLNDRGKGKIGFRLDIKSVVRFKVSTWDFHRHTMHATCDVVVGPNGYILPTSKDKRC 219
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Match: A0A067JAH1|A0A067JAH1_JATCU (LEA_2 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21277 PE=4 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 1.337e-107 Identity = 148/223 (66.37%), Postives = 178/223 (79.82%), Query Frame = 0 Query: 1 MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
M++++RLPV S Q IKRH+TARYYAHRV ESLTTRVSK +C FL +L VAGI+ F+L+LSLRPHRPRI IH FS+PAL Q NGF+NA+IIFNV+ARNSNQH+G Y+ VEGSVYYK+Q +G TPL D F+QEPK TT++ L GATL +NS+RW EF++DR QG V FRL+I STI F+VSTW SK H MHA C+V VG DG IL Y+DKRCP+YFT
Sbjct: 1 MNTSERLPVSSGSQPPAIKRHHTARYYAHRVHESLTTRVSKLICASFLIILFVAGIVAFILWLSLRPHRPRIHIHNFSVPALGQGNGFDNAQIIFNVSARNSNQHIGFYYGKVEGSVYYKDQMIGYTPLLDPFYQEPKNTTVMTGVLGGATLNLNSQRWNEFLNDRSQGTVIFRLDITSTIEFKVSTWHSKNHRMHANCNVGVGPDGSILALYRDKRCPVYFT 223
BLAST of CMJ_chr2_006390.1 vs. ExPASy Swiss-Prot
Match: NDR1_ARATH (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.374e-15 Identity = 53/180 (29.44%), Postives = 84/180 (46.67%), Query Frame = 0 Query: 37 TRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQ-PNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQ-RVGATPLA-------DTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDG 207
T + C LS + AG+ L+LSLR +P+ I F IPAL + PN +N + F V N N+ GIY+D V + N ++ ++ L F+Q K A G +N++ + + G FRL++K+ +RF++ W +KR+ + DV V DG
Sbjct: 8 TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKK----KAKKWGQVKPLNNQTVLRAVLPNGSAV--FRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 181
BLAST of CMJ_chr2_006390.1 vs. ExPASy Swiss-Prot
Match: NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.710e-14 Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = 0 Query: 43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVT--ARNSNQHVGIYFDSVEG-SVYYKNQRV--GATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFV 203
L +F+ L+++AGI VLYL RP P+ I FS+ + N FNVT +RN N +G+Y++ VYY + + G P+ F+Q K T++ LSG+ + + S E ++ + V F+L+IK+ ++ + + + ++ CDV V
Sbjct: 79 LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL-NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPV---FYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239
BLAST of CMJ_chr2_006390.1 vs. ExPASy Swiss-Prot
Match: NHL2_ARATH (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.643e-12 Identity = 39/154 (25.32%), Postives = 77/154 (50.00%), Query Frame = 0 Query: 43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALA-QPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTV-NSRRWMEFMHDRGQGKVGFRLEIKSTIRFQ---VSTWDSK 191
+C I +++ ++ G+ +L+L RP+ + ++ ++ + PN + + N T RN NQ VG+Y+D S YY +QR G+ ++ +F+Q K TT++ + G L V + D G +++ ++RF+ + +W K
Sbjct: 55 ICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVS-SFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLK 207
BLAST of CMJ_chr2_006390.1 vs. ExPASy Swiss-Prot
Match: NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.640e-11 Identity = 35/152 (23.03%), Postives = 70/152 (46.05%), Query Frame = 0 Query: 56 IILFVLYLSLRPHRPRIFI---HAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVG 204
+I+F+++L L P RP + +S+ N+ + + ++N N+ VGIY+D + Y+ Q++ + F+Q + +L A L G L V + +R GK+ +++ +R+++ TW S + + C V
Sbjct: 40 LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVA 191
BLAST of CMJ_chr2_006390.1 vs. ExPASy Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.378e-10 Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 95 FNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTV---NSRRWMEFMHDRGQGKVGFRLEIKSTIRFQV 185
N++ RNS +GI++D E +VYY NQR+GA P+ F+ K T +L A G TL + N R+ +F D+ G +R+++K +I F+V
Sbjct: 33 LNLSIRNSKSSIGIHYDRFEATVYYMNQRLGAVPMP-LFYLGSKNTMLLRALFEGQTLVLLKGNERK--KFEDDQKTGV--YRIDVKLSINFRV 121
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT4G05220.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr4:2685104-2685784 REVERSE LENGTH=226 | 201606) HSP 1 Score: 287.73 bits (735), Expect = 4.109e-99 Identity = 132/219 (60.27%), Postives = 167/219 (76.26%), Query Frame = 0 Query: 7 LPVRSTP--QNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
+P+R++P + QP+KRH++A YYAHRVRESL+TR+SK +C +FL +L G+I F+L+LSLRPHRPR I F + L QP G ENA I FNVT N NQH+G+YFDS+EGS+YYK+QRVG PL + FFQ+P TTI+ TL+GA+LTVNS RW EF +DR QG VGFRL+I STIRF++ W SK H MHA C++ VG DG ILP + KRCP+YFT
Sbjct: 8 IPIRTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGLILPKFNHKRCPVYFT 226
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT1G61760.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr1:22807440-22808114 REVERSE LENGTH=224 | 201606) HSP 1 Score: 276.944 bits (707), Expect = 7.496e-95 Identity = 127/224 (56.70%), Postives = 166/224 (74.11%), Query Frame = 0 Query: 1 MHS-TDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223
MH+ D LPVRS P +PI RH++A HRV+ESLTTRVSK +C IFLSLLL GII F+L++SL+PHRPR+ I FSI L++P+GFE + I F +TA N NQ+VGIY+DS+EGSVYYK +R+G+T L + F+Q+PK T+ + LS + VN RWME DR QGK+ FRL+++S IRF+V TW SK H M+A+C + +G DG +L A KDKRCP+YFT
Sbjct: 1 MHNKVDSLPVRSNPSTRPISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDKRCPVYFT 224
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT3G20600.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7194877-7195536 FORWARD LENGTH=219 | 201606) HSP 1 Score: 75.8702 bits (185), Expect = 1.405e-16 Identity = 53/180 (29.44%), Postives = 84/180 (46.67%), Query Frame = 0 Query: 37 TRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQ-PNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQ-RVGATPLA-------DTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDG 207
T + C LS + AG+ L+LSLR +P+ I F IPAL + PN +N + F V N N+ GIY+D V + N ++ ++ L F+Q K A G +N++ + + G FRL++K+ +RF++ W +KR+ + DV V DG
Sbjct: 8 TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKK----KAKKWGQVKPLNNQTVLRAVLPNGSAV--FRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 181
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT3G44220.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:15928216-15929645 FORWARD LENGTH=206 | 201606) HSP 1 Score: 75.0998 bits (183), Expect = 1.948e-16 Identity = 45/172 (26.16%), Postives = 82/172 (47.67%), Query Frame = 0 Query: 38 RVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPA--LAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDG 207
++ K + + L L ++F+++ L PH PR + +I A ++QPN + + + +++RN N +GI++D ++ Y+NQ+V L +Q TI L G T+ V D G V ++I +R++V TW S R+ +H C ++ G
Sbjct: 15 KMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPN-YLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYITLAG 185
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT2G27080.2 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr2:11566383-11567165 FORWARD LENGTH=260 | 201606) HSP 1 Score: 73.559 bits (179), Expect = 1.749e-15 Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = 0 Query: 43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVT--ARNSNQHVGIYFDSVEG-SVYYKNQRV--GATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFV 203
L +F+ L+++AGI VLYL RP P+ I FS+ + N FNVT +RN N +G+Y++ VYY + + G P+ F+Q K T++ LSG+ + + S E ++ + V F+L+IK+ ++ + + + ++ CDV V
Sbjct: 79 LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL-NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPV---FYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT2G27080.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr2:11566383-11567165 FORWARD LENGTH=260 | 201606) HSP 1 Score: 73.559 bits (179), Expect = 1.749e-15 Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = 0 Query: 43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALAQPNGFENAEIIFNVT--ARNSNQHVGIYFDSVEG-SVYYKNQRV--GATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFV 203
L +F+ L+++AGI VLYL RP P+ I FS+ + N FNVT +RN N +G+Y++ VYY + + G P+ F+Q K T++ LSG+ + + S E ++ + V F+L+IK+ ++ + + + ++ CDV V
Sbjct: 79 LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL-NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPV---FYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT4G01410.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr4:578308-578991 FORWARD LENGTH=227 | 201606) HSP 1 Score: 72.7886 bits (177), Expect = 2.194e-15 Identity = 44/166 (26.51%), Postives = 81/166 (48.80%), Query Frame = 0 Query: 41 KTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPAL---AQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFV 203
+ +C ++L++ GII +L+L RPH+PR+ + +I L A P + + F+V ARN N+ V I++D + V YK+Q + K+T ++ + G + V+ +D G V R+ I +R++ + R+ +A CDV++
Sbjct: 42 RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPP--LISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWL 205
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT3G52470.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:19450750-19451376 FORWARD LENGTH=208 | 201606) HSP 1 Score: 69.707 bits (169), Expect = 2.388e-14 Identity = 38/167 (22.75%), Postives = 80/167 (47.90%), Query Frame = 0 Query: 39 VSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPA--LAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFV 203
V + LC ++ +++ I +F++++ LRP +PR + ++ A L+QPN + + +RN N +GIY+D + Y NQ++ +Q K + + G + + + ++ +G VG + T+R++V T + ++ +H C F+
Sbjct: 15 VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPN-LLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFI 180
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT5G22200.1 (| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr5:7355688-7356871 FORWARD LENGTH=210 | 201606) HSP 1 Score: 67.0106 bits (162), Expect = 2.209e-13 Identity = 40/145 (27.59%), Postives = 69/145 (47.59%), Query Frame = 0 Query: 65 LRPHRPRIFIHAFSIPA--LAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWDSKRHTMHATCDVFVGTDG 207
L PH PR + +I ++QPN F ++ + V++RN N +GI++D ++ V Y+NQ V L + +Q T+ L G+ + V D G V ++I +R++V +W S + +H C F+ G
Sbjct: 46 LHPHGPRFVLQDVTINDFNVSQPN-FLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFITVTG 189
BLAST of CMJ_chr2_006390.1 vs. Araport11
Match: AT3G11650.1 (| NDR1/HIN1-like 2 | Chr3:3676264-3676986 REVERSE LENGTH=240 | 201606) HSP 1 Score: 67.0106 bits (162), Expect = 3.727e-13 Identity = 39/154 (25.32%), Postives = 77/154 (50.00%), Query Frame = 0 Query: 43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHAFSIPALA-QPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQRVGATPLADTFFQEPKTTTILHATLSGATLTV-NSRRWMEFMHDRGQGKVGFRLEIKSTIRFQ---VSTWDSK 191
+C I +++ ++ G+ +L+L RP+ + ++ ++ + PN + + N T RN NQ VG+Y+D S YY +QR G+ ++ +F+Q K TT++ + G L V + D G +++ ++RF+ + +W K
Sbjct: 55 ICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVS-SFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLK 207 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_006390.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006390.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 5 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006390.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_006390.1_cmj_v1 ID=CMJ_chr2_006390.1_cmj_v1; Name=CMJ_chr2_006390.1; organism=Citrus maxima; type=mRNA; length=672bpback to top protein sequence of CMJ_chr2_006390.1_cmj_v1 >CMJ_chr2_006390.1_cmj_v1 ID=CMJ_chr2_006390.1_cmj_v1; Name=CMJ_chr2_006390.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=224bpback to top mRNA from alignment at chr2:3936831..3937621- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=791bp; location=Sequence derived from: chr2:3936831..3937621- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:3936831..3937621- >CMJ_chr2_006390.1_cmj_v1 ID=CMJ_chr2_006390.1_cmj_v1; Name=CMJ_chr2_006390.1; organism=Citrus maxima; type=CDS; length=672bp; location=Sequence derived from: chr2:3936831..3937621- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|