CMJ_chr2_006750.3
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A067GJB2|A0A067GJB2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030370mg PE=3 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 9.554e-128 Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0 Query: 1 MCTISIFPYWLIGFYLACWPVILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
MCTISIFPYWLIGFYLACWPVILVGRSLLGGLGNNLSGLSSTSHEMAS NFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 1 MCTISIFPYWLIGFYLACWPVILVGRSLLGGLGNNLSGLSSTSHEMASGNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: V4UDL8|V4UDL8_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016904mg PE=3 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 8.348e-124 Identity = 174/178 (97.75%), Postives = 174/178 (97.75%), Query Frame = 0 Query: 1 MCTISIFPYWLIGFYLACWPVILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
MCTISIFPY LIGFYLACWPV LVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAM HGR DGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 1 MCTISIFPYRLIGFYLACWPVKLVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMHHGRSDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A067G9X7|A0A067G9X7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030370mg PE=3 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 9.661e-109 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0 Query: 21 VILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
VILVGRSLLGGLGNNLSGLSSTSHEMAS NFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 12 VILVGRSLLGGLGNNLSGLSSTSHEMASGNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 169
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A2H5N1E6|A0A2H5N1E6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_009600 PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 2.961e-107 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0 Query: 21 VILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
V LVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGR DGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKH+SILTLAEHLA
Sbjct: 12 VKLVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRSDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHISILTLAEHLA 169
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A067G9X2|A0A067G9X2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030370mg PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 7.319e-107 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0 Query: 24 VGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
VGRSLLGGLGNNLSGLSSTSHEMAS NFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 12 VGRSLLGGLGNNLSGLSSTSHEMASGNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 166
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: V4U8J2|V4U8J2_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016904mg PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 1.870e-106 Identity = 155/158 (98.10%), Postives = 155/158 (98.10%), Query Frame = 0 Query: 21 VILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
V LVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAM HGR DGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 12 VKLVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMHHGRSDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 169
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A067GJ10|A0A067GJ10_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030370mg PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 5.234e-106 Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0 Query: 21 VILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
VILVGRSLLGGLGNNLSGLSSTSHEMAS NFLSQQ RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 12 VILVGRSLLGGLGNNLSGLSSTSHEMASGNFLSQQ-RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 168
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: V4UIY5|V4UIY5_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016904mg PE=3 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 9.584e-104 Identity = 154/158 (97.47%), Postives = 154/158 (97.47%), Query Frame = 0 Query: 21 VILVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
V LVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQ RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAM HGR DGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
Sbjct: 12 VKLVGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQ-RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMHHGRSDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA 168
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A6J5TU70|A0A6J5TU70_PRUAR (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS10363 PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 2.190e-82 Identity = 128/157 (81.53%), Postives = 137/157 (87.26%), Query Frame = 0 Query: 24 VGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKG-RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAG-EPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
VGRSLLGGLGNN SGL STSHEM S FLSQQQRTFIQMRT+LKVVDNSGAK VMCIQ LK +K ARLGDTIVASVKEA P GKVKKGQVV+ VVVRAAMQ GR DGSEV+FDDNAVVLV+K G +P GTRVFGPVPHELR+KKHV IL+LAE +A
Sbjct: 12 VGRSLLGGLGNNSSGLLSTSHEMTCSTFLSQQQRTFIQMRTILKVVDNSGAKKVMCIQALKANKKGARLGDTIVASVKEAHPNGKVKKGQVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGRQPIGTRVFGPVPHELRKKKHVKILSLAEQIA 168
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Match: A0A6P5TGH2|A0A6P5TGH2_PRUAV (50S ribosomal protein HLP, mitochondrial-like isoform X1 OS=Prunus avium OX=42229 GN=LOC110767078 PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 2.190e-82 Identity = 128/157 (81.53%), Postives = 137/157 (87.26%), Query Frame = 0 Query: 24 VGRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKG-RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAG-EPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
VGRSLLGGLGNN SGL STSHEM S FLSQQQRTFIQMRT+LKVVDNSGAK VMCIQ LK +K ARLGDTIVASVKEA P GKVKKGQVV+ VVVRAAMQ GR DGSEV+FDDNAVVLV+K G +P GTRVFGPVPHELR+KKHV IL+LAE +A
Sbjct: 12 VGRSLLGGLGNNSSGLLSTSHEMTCSTFLSQQQRTFIQMRTILKVVDNSGAKKVMCIQALKANKKGARLGDTIVASVKEAHPNGKVKKGQVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGRQPIGTRVFGPVPHELRKKKHVKILSLAEQIA 168
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: HLP_ARATH (50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLP PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.134e-72 Identity = 116/163 (71.17%), Postives = 129/163 (79.14%), Query Frame = 0 Query: 25 GRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQ--RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAG-------EPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
GRSLLGGL N G ++S+ M + + LSQQQ RTFIQM TVLKVVDNSGAK VMCIQ LKG+K ARLGDTIVASVKEAMP GKVKKG VV+ VVVRAAMQ GR DGSEVRFDDNAVVLV+ +P GTRVFGPVPHELR+KKH+ IL LA+H+A
Sbjct: 13 GRSLLGGLNN--GGSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: HLL_ARATH (50S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLL PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 7.774e-59 Identity = 106/184 (57.61%), Postives = 127/184 (69.02%), Query Frame = 0 Query: 25 GRSLLGGLGNNLSGL-SSTSHEMASSNFLSQQQ-RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKE------------AMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLV---NKAG--------------EPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
GRSLLGGL N SGL +S+S+ M + + LSQQQ RTFIQM T+LK VDNS AK VMCIQ L+G+K ARLGD IV SVKE A+P GKVKKG VV+ VVVRAAM GR DGS+V+FDDNA+V+V K G +PTGTRVFGPVPHE+R +K + IL+LA+H+
Sbjct: 12 GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVDNSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHEMRLRKQLKILSLAQHI 195
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_CAUVN (50S ribosomal protein L14 OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=rplN PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.572e-42 Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L+V DNSGA+ VMCI+ L GR+ A +GD IV SVKEA+P G+VKKG V+ AVVVR R DGS +RFD NA V+VNK EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLEVADNSGARRVMCIKVLGGAGRRYASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQNLKRKDGSVIRFDKNAAVIVNKQSEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_CAUVC (50S ribosomal protein L14 OS=Caulobacter vibrioides (strain ATCC 19089 / CB15) OX=190650 GN=rplN PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.572e-42 Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L+V DNSGA+ VMCI+ L GR+ A +GD IV SVKEA+P G+VKKG V+ AVVVR R DGS +RFD NA V+VNK EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLEVADNSGARRVMCIKVLGGAGRRYASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQNLKRKDGSVIRFDKNAAVIVNKQSEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_OLICO (50S ribosomal protein L14 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=rplN PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.949e-42 Identity = 73/121 (60.33%), Postives = 86/121 (71.07%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L V DNSGA+ VMCI+ L G R+ A +GD IV SVKEA+P GKVKKG V+ AVVVR A R DGS +RFD NA VLVN EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLDVADNSGARRVMCIKVLGGSKRRYATVGDIIVVSVKEAIPRGKVKKGDVMKAVVVRVAKDIRRADGSVIRFDRNAAVLVNNQSEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_BEII9 (50S ribosomal protein L14 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712) OX=395963 GN=rplN PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 9.102e-42 Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV SVKEA+P G+VKKG V+ AVVVR A R DGS +RFD NA VL+N EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYAGVGDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIKRADGSVIRFDTNAAVLINNQSEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_CAUSK (50S ribosomal protein L14 OS=Caulobacter sp. (strain K31) OX=366602 GN=rplN PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.084e-41 Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L+V DNSGA+ VMCI+ L GR+ A +GD IV SVKEA+P G+VKKG V+ AVVVR R DGS +RFD NA V+VNK EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLEVADNSGARRVMCIKVLGGAGRRYASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQGMKRKDGSLIRFDKNAAVIVNKQSEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_NITHX (50S ribosomal protein L14 OS=Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14) OX=323097 GN=rplN PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.319e-41 Identity = 71/121 (58.68%), Postives = 86/121 (71.07%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L V DNSGA+ VMCI+ L G R+ A +GD IV S+KEA+P GKVKKG V+ AVVVR A R DGS +RFD NA VL+N EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLDVADNSGARRVMCIKVLGGSKRRYATVGDIIVVSIKEAIPRGKVKKGDVMKAVVVRVAKDIRRADGSVIRFDRNAAVLINNQSEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_GEOMG (50S ribosomal protein L14 OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=rplN PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.377e-41 Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T+L V DNSGA+ + CI+ L G RK A +GD IVASV+EA+P KVKKG VV AV+VR A + GR DGS +RFDDN+ V++N EP GTR+FGPV ELR +K + I++LA +
Sbjct: 1 MIQMQTILDVADNSGARKLFCIKVLGGSKRKYAGIGDIIVASVREAIPNSKVKKGDVVKAVIVRTAKEVGRLDGSYIRFDDNSAVVINNQREPVGTRIFGPVARELRARKFMKIVSLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Match: RL14_AZOC5 (50S ribosomal protein L14 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rplN PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.393e-41 Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV SVKEA+P G+VKKG V+ AVVVR A R DGS +RFD NA VL+N EP GTR+FGPVP ELR K H+ I++LA +
Sbjct: 1 MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYAHVGDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIRRVDGSVIRFDRNAAVLINNNKEPVGTRIFGPVPRELRAKNHMKIISLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT5G46160.2 (| Ribosomal protein L14p/L23e family protein | Chr5:18711456-18712341 REVERSE LENGTH=172 | 201606) HSP 1 Score: 218.779 bits (556), Expect = 2.493e-73 Identity = 116/162 (71.60%), Postives = 129/162 (79.63%), Query Frame = 0 Query: 25 GRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQR-TFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAG-------EPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
GRSLLGGL N G ++S+ M + + LSQQQR TFIQM TVLKVVDNSGAK VMCIQ LKG+K ARLGDTIVASVKEAMP GKVKKG VV+ VVVRAAMQ GR DGSEVRFDDNAVVLV+ +P GTRVFGPVPHELR+KKH+ IL LA+H+A
Sbjct: 13 GRSLLGGLNN--GGSMNSSNGMMNESILSQQQRRTFIQMGTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 172
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT5G46160.1 (| Ribosomal protein L14p/L23e family protein | Chr5:18711456-18712341 REVERSE LENGTH=173 | 201606) HSP 1 Score: 218.394 bits (555), Expect = 3.207e-73 Identity = 116/163 (71.17%), Postives = 129/163 (79.14%), Query Frame = 0 Query: 25 GRSLLGGLGNNLSGLSSTSHEMASSNFLSQQQ--RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAG-------EPTGTRVFGPVPHELRRKKHVSILTLAEHLA 178
GRSLLGGL N G ++S+ M + + LSQQQ RTFIQM TVLKVVDNSGAK VMCIQ LKG+K ARLGDTIVASVKEAMP GKVKKG VV+ VVVRAAMQ GR DGSEVRFDDNAVVLV+ +P GTRVFGPVPHELR+KKH+ IL LA+H+A
Sbjct: 13 GRSLLGGLNN--GGSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT1G17560.1 (| Ribosomal protein L14p/L23e family protein | Chr1:6037635-6038574 REVERSE LENGTH=196 | 201606) HSP 1 Score: 185.267 bits (469), Expect = 7.954e-60 Identity = 106/184 (57.61%), Postives = 127/184 (69.02%), Query Frame = 0 Query: 25 GRSLLGGLGNNLSGL-SSTSHEMASSNFLSQQQ-RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKE------------AMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLV---NKAG--------------EPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
GRSLLGGL N SGL +S+S+ M + + LSQQQ RTFIQM T+LK VDNS AK VMCIQ L+G+K ARLGD IV SVKE A+P GKVKKG VV+ VVVRAAM GR DGS+V+FDDNA+V+V K G +PTGTRVFGPVPHE+R +K + IL+LA+H+
Sbjct: 12 GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVDNSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHEMRLRKQLKILSLAQHI 195
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT1G17560.2 (| Ribosomal protein L14p/L23e family protein | Chr1:6037635-6038156 REVERSE LENGTH=173 | 201606) HSP 1 Score: 159.844 bits (403), Expect = 4.017e-50 Identity = 88/154 (57.14%), Postives = 104/154 (67.53%), Query Frame = 0 Query: 53 SQQQRTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKE------------AMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLV---NKAG--------------EPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
QQ RTFIQM T+LK VDNS AK VMCIQ L+G+K ARLGD IV SVKE A+P GKVKKG VV+ VVVRAAM GR DGS+V+FDDNA+V+V K G +PTGTRVFGPVPHE+R +K + IL+LA+H+
Sbjct: 19 QQQHRTFIQMGTILKCVDNSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHEMRLRKQLKILSLAQHI 172
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: ATCG00780.1 (| ribosomal protein L14 | ChrC:80696-81064 REVERSE LENGTH=122 | 201606) HSP 1 Score: 110.923 bits (276), Expect = 1.240e-31 Identity = 52/121 (42.98%), Postives = 81/121 (66.94%), Query Frame = 0 Query: 59 FIQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
IQ +T L V DNSGA+ +MCI+ + R+ A +GD IVA +KEA+P +++ +V+ AV+VR + R +G+ +R+DDNA V++++ G P GTRVFG +P ELR+ I++LA +
Sbjct: 1 MIQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEV 121
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT3G04400.2 (| Ribosomal protein L14p/L23e family protein | Chr3:1167611-1168308 FORWARD LENGTH=125 | 201606) HSP 1 Score: 54.6842 bits (130), Expect = 8.099e-10 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 70 DNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
DN+GAK ++ ++ +KGR A +GD ++A+VK+ P + K V+ AV+VR R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 15 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 109
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT2G33370.2 (| Ribosomal protein L14p/L23e family protein | Chr2:14143718-14144270 REVERSE LENGTH=125 | 201606) HSP 1 Score: 54.6842 bits (130), Expect = 8.099e-10 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 70 DNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
DN+GAK ++ ++ +KGR A +GD ++A+VK+ P + K V+ AV+VR R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 15 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 109
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT3G04400.1 (| Ribosomal protein L14p/L23e family protein | Chr3:1167339-1168308 FORWARD LENGTH=140 | 201606) HSP 1 Score: 54.6842 bits (130), Expect = 9.885e-10 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 70 DNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
DN+GAK ++ ++ +KGR A +GD ++A+VK+ P + K V+ AV+VR R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 30 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT2G33370.1 (| Ribosomal protein L14p/L23e family protein | Chr2:14143718-14144644 REVERSE LENGTH=140 | 201606) HSP 1 Score: 54.6842 bits (130), Expect = 9.885e-10 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 70 DNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
DN+GAK ++ ++ +KGR A +GD ++A+VK+ P + K V+ AV+VR R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 30 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
BLAST of CMJ_chr2_006750.3 vs. Araport11
Match: AT1G04480.1 (| Ribosomal protein L14p/L23e family protein | Chr1:1216110-1217257 FORWARD LENGTH=140 | 201606) HSP 1 Score: 54.6842 bits (130), Expect = 9.885e-10 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 70 DNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVRAAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
DN+GAK ++ ++ +KGR A +GD ++A+VK+ P + K V+ AV+VR R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 30 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_006750.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006750.3 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_006750.3 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_006750.3_cmj_v1 ID=CMJ_chr2_006750.3_cmj_v1; Name=CMJ_chr2_006750.3; organism=Citrus maxima; type=mRNA; length=537bpback to top protein sequence of CMJ_chr2_006750.3_cmj_v1 >CMJ_chr2_006750.3_cmj_v1 ID=CMJ_chr2_006750.3_cmj_v1; Name=CMJ_chr2_006750.3_cmj_v1; organism=Citrus maxima; type=polypeptide; length=179bpback to top mRNA from alignment at chr2:4191700..4193893+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2194bp; location=Sequence derived from: chr2:4191700..4193893+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:4191700..4193893+ >CMJ_chr2_006750.3_cmj_v1 ID=CMJ_chr2_006750.3_cmj_v1; Name=CMJ_chr2_006750.3; organism=Citrus maxima; type=CDS; length=537bp; location=Sequence derived from: chr2:4191700..4193893+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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