CMJ_chr2_013000.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A2H5PVV9|A0A2H5PVV9_CITUN (Fe2OG dioxygenase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_172450 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.251e-38 Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
MMTVTEAESYDRAKEVQQFEESKIGVNG ITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE
Sbjct: 1 MMTVTEAESYDRAKEVQQFEESKIGVNG-----ITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 71
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A2H5PVV1|A0A2H5PVV1_CITUN (Fe2OG dioxygenase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_172450 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.422e-38 Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
MMTVTEAESYDRAKEVQQFEESKIGVNG ITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE
Sbjct: 1 MMTVTEAESYDRAKEVQQFEESKIGVNG-----ITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 71
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A067F3S5|A0A067F3S5_CITSI (DIOX_N domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046659mg PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.143e-27 Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0 Query: 6 EAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
+ ESYDRA EV+QF++SKIGV GLVDSG+TTIPRFFIH PD LS IRR T+PDPD+IPI+D SG DS+
Sbjct: 4 KTESYDRATEVKQFDDSKIGVKGLVDSGVTTIPRFFIHSPDTLSDIRRPNSTTQPDPDVIPIVDLSGVDSD 74
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: V4UB90|V4UB90_CITCL (DIOX_N domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10016446mg PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.918e-26 Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0 Query: 6 EAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
+ ES DRA EV+QF++SK+GV GLVDSG+TTIPRFFIH PD LS IRR T+PDPD++PI+D SG DS+
Sbjct: 4 KTESCDRATEVKQFDDSKVGVEGLVDSGVTTIPRFFIHSPDTLSDIRRPNSTTQPDPDVVPIVDLSGVDSD 74
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A2H5PVX4|A0A2H5PVX4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_172430 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.486e-25 Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 0 Query: 6 EAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
+ ES DRA EV+QF++SKIGV GLVDSG+TTIPRFFIH PD LS IRR T+PDPD++PI+D SG DS+
Sbjct: 4 KTESCDRATEVKQFDDSKIGVKGLVDSGVTTIPRFFIHSPDTLSDIRRPNSTTQPDPDVVPIVDLSGVDSD 74
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A5C7HJK4|A0A5C7HJK4_9ROSI (Fe2OG dioxygenase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018347 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.167e-21 Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 0 Query: 3 TVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGAD 74
TV ESYDR+++V+QFE++K GV GLVDSGITTIPRFFIHPPD LS + + T+P D+IP ID SG +
Sbjct: 5 TVNSTESYDRSRDVKQFEDTKTGVKGLVDSGITTIPRFFIHPPDKLSDLSPNS-TTRPGSDVIPTIDLSGVN 75
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A7N2L850|A0A7N2L850_QUELO (Fe2OG dioxygenase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.532e-21 Identity = 48/76 (63.16%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
M T E YDR KEV+QF+ESKIGV GLVDSGITTIPRFF+HPPD LS ++ T+PD +IP ID SG DS
Sbjct: 1 MATNVNDEEYDRVKEVKQFDESKIGVKGLVDSGITTIPRFFVHPPDVLSQLKAGS-KTRPDL-VIPTIDLSGVDSH 74
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A7N2L6A1|A0A7N2L6A1_QUELO (Fe2OG dioxygenase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.865e-21 Identity = 48/76 (63.16%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
M T E YDR KEV+QF+ESKIGV GLVDSGITTIPRFF+HPPD LS ++ T+PD +IP ID SG DS
Sbjct: 1 MATNVNDEEYDRVKEVKQFDESKIGVKGLVDSGITTIPRFFVHPPDVLSQLKPGS-KTRPDL-VIPTIDLSGVDSH 74
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A067F047|A0A067F047_CITSI (Fe2OG dioxygenase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g039774mg PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.960e-21 Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 0 Query: 3 TVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADSE 76
T+ ESYDRAKEV++F+ESK+GV GLVD G+T IPRFFIHPP L+ + R K T+P D++P ID SG DS+
Sbjct: 23 TIMSLESYDRAKEVKRFDESKVGVKGLVDLGVTAIPRFFIHPPATLADL-RPKSKTRPVSDVVPTIDLSGVDSD 95
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Match: A0A6A1UZP8|A0A6A1UZP8_9ROSI (Fe2OG dioxygenase domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR7G028004 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.270e-21 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 3 TVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGADS 75
T T+ E YDRAKEV+QF+++KIGV GL+DSGITTIPRFF+HPPD LS + + + T+P D+IP ID SG DS
Sbjct: 5 TTTDGE-YDRAKEVKQFDDAKIGVKGLIDSGITTIPRFFVHPPDILSDL-KPRPETRPASDLIPAIDLSGVDS 75
BLAST of CMJ_chr2_013000.1 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana OX=3702 GN=GSL-OH PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 5.252e-10 Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 7 AESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDI--IPIIDFSG 72
AE+YDRA E++ F+E KIGV GLVD+G+T +PR F H P A N KP + IP ID G
Sbjct: 2 AENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIF-HNPHVNVA------NPKPTSTVVMIPTIDLGG 62
BLAST of CMJ_chr2_013000.1 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g06640 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 5.837e-10 Identity = 35/80 (43.75%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPD------IIPIIDFSGAD 74
M + A S+DRA E++ F+E+K GV GLVDSGI+ IPR F H L+ N KP P IP ID G D
Sbjct: 1 MESTKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELA-------NPKPLPSDLLHLKTIPTIDLGGRD 73
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT2G30840.2 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr2:13135826-13136833 REVERSE LENGTH=306 | 201606) HSP 1 Score: 58.5362 bits (140), Expect = 1.056e-11 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 0 Query: 9 SYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGA 73
+YDRA EV+ F+E KIGV GL+D+G+T IPR F HP L+ S L +IP ID G
Sbjct: 4 TYDRASEVKAFDELKIGVKGLLDAGVTQIPRIFHHPHLNLT---DSNLLLSSTTMVIPTIDLKGG 65
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT1G06640.2 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr1:2032366-2033505 FORWARD LENGTH=322 | 201606) HSP 1 Score: 58.151 bits (139), Expect = 1.500e-11 Identity = 35/80 (43.75%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPD------IIPIIDFSGAD 74
M + A S+DRA E++ F+E+K GV GLVDSGI+ IPR F H L+ N KP P IP ID G D
Sbjct: 1 MESTKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELA-------NPKPLPSDLLHLKTIPTIDLGGRD 73
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT1G06640.3 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr1:2032366-2033527 FORWARD LENGTH=286 | 201606) HSP 1 Score: 58.151 bits (139), Expect = 1.508e-11 Identity = 35/80 (43.75%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPD------IIPIIDFSGAD 74
M + A S+DRA E++ F+E+K GV GLVDSGI+ IPR F H L+ N KP P IP ID G D
Sbjct: 1 MESTKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELA-------NPKPLPSDLLHLKTIPTIDLGGRD 73
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT2G30840.3 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr2:13135581-13136833 REVERSE LENGTH=356 | 201606) HSP 1 Score: 57.3806 bits (137), Expect = 3.216e-11 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 0 Query: 9 SYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGA 73
+YDRA EV+ F+E KIGV GL+D+G+T IPR F HP L+ S L +IP ID G
Sbjct: 4 TYDRASEVKAFDELKIGVKGLLDAGVTQIPRIFHHPHLNLT---DSNLLLSSTTMVIPTIDLKGG 65
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT2G30840.1 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr2:13135581-13136833 REVERSE LENGTH=362 | 201606) HSP 1 Score: 57.3806 bits (137), Expect = 3.265e-11 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 0 Query: 9 SYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDIIPIIDFSGA 73
+YDRA EV+ F+E KIGV GL+D+G+T IPR F HP L+ S L +IP ID G
Sbjct: 4 TYDRASEVKAFDELKIGVKGLLDAGVTQIPRIFHHPHLNLT---DSNLLLSSTTMVIPTIDLKGG 65
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT2G30830.1 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr2:13132707-13134284 REVERSE LENGTH=358 | 201606) HSP 1 Score: 56.9954 bits (136), Expect = 4.544e-11 Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 7 AESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDI-IPIIDFSGA 73
A +YDRA EV+ F++ KIGV GLVD+GIT +PR F H A++ N KP + IP ID G
Sbjct: 2 AGNYDRAGEVKAFDQMKIGVKGLVDAGITKVPRIFHHQDVAVT-------NPKPSSTLEIPTIDVGGG 62
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT2G25450.1 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr2:10830286-10831563 REVERSE LENGTH=359 | 201606) HSP 1 Score: 56.6102 bits (135), Expect = 5.374e-11 Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 7 AESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPDI--IPIIDFSG 72
AE+YDRA E++ F+E KIGV GLVD+G+T +PR F H P A N KP + IP ID G
Sbjct: 2 AENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIF-HNPHVNVA------NPKPTSTVVMIPTIDLGG 62
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT1G06640.1 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr1:2032366-2033775 FORWARD LENGTH=369 | 201606) HSP 1 Score: 56.6102 bits (135), Expect = 5.972e-11 Identity = 35/80 (43.75%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 1 MMTVTEAESYDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPD------IIPIIDFSGAD 74
M + A S+DRA E++ F+E+K GV GLVDSGI+ IPR F H L+ N KP P IP ID G D
Sbjct: 1 MESTKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELA-------NPKPLPSDLLHLKTIPTIDLGGRD 73
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT1G06650.1 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr1:2035909-2037047 FORWARD LENGTH=314 | 201606) HSP 1 Score: 55.4546 bits (132), Expect = 1.467e-10 Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 0 Query: 10 YDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPD------IIPIIDFSGAD 74
+DRA E++ F+E+K GV GLVDSG++ +PR F HP LS KP P IP ID G D
Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLST-------PKPLPSDLLHLKTIPTIDLGGRD 73
BLAST of CMJ_chr2_013000.1 vs. Araport11
Match: AT1G06650.2 (| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Chr1:2035909-2037186 FORWARD LENGTH=369 | 201606) HSP 1 Score: 55.4546 bits (132), Expect = 1.623e-10 Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 0 Query: 10 YDRAKEVQQFEESKIGVNGLVDSGITTIPRFFIHPPDALSAIRRSKLNTKPDPD------IIPIIDFSGAD 74
+DRA E++ F+E+K GV GLVDSG++ +PR F HP LS KP P IP ID G D
Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLST-------PKPLPSDLLHLKTIPTIDLGGRD 73 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_013000.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_013000.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_013000.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_013000.1_cmj_v1 ID=CMJ_chr2_013000.1_cmj_v1; Name=CMJ_chr2_013000.1; organism=Citrus maxima; type=mRNA; length=231bpback to top protein sequence of CMJ_chr2_013000.1_cmj_v1 >CMJ_chr2_013000.1_cmj_v1 ID=CMJ_chr2_013000.1_cmj_v1; Name=CMJ_chr2_013000.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=77bpback to top mRNA from alignment at chr2:8597459..8597689+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=231bp; location=Sequence derived from: chr2:8597459..8597689+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:8597459..8597689+ >CMJ_chr2_013000.1_cmj_v1 ID=CMJ_chr2_013000.1_cmj_v1; Name=CMJ_chr2_013000.1; organism=Citrus maxima; type=CDS; length=231bp; location=Sequence derived from: chr2:8597459..8597689+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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