CMJ_chr2_013260.4
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A1S8AC86|A0A1S8AC86_CITLI (RNA-dependent RNA polymerase OS=Citrus limon OX=2708 PE=3 SV=1) HSP 1 Score: 2354.33 bits (6100), Expect = 0.000e+0 Identity = 1127/1132 (99.56%), Postives = 1130/1132 (99.82%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAFPALEQQFRQGLRMY 1132 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISN+KFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDE+EIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIED+EEYFTNYIVNDSLGIIANAHTVFADREP KARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYN GMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAFPALEQQFRQGLRMY Sbjct: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAFPALEQQFRQGLRMY 1132
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A5C7HLD3|A0A5C7HLD3_9ROSI (RNA-dependent RNA polymerase OS=Acer yangbiense OX=1000413 GN=EZV62_018379 PE=3 SV=1) HSP 1 Score: 1785.77 bits (4624), Expect = 0.000e+0 Identity = 863/1139 (75.77%), Postives = 981/1139 (86.13%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKK---GVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDT-EDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA--FPALEQQFRQGLRMY 1132 MGKTI+VFGFP VT+E VK+FLE TG GT+YA+K+R K GV + YAIVQFTT E A++I+SLA R L YG SYL A ME+D VP+PRTFMH+ME I L+FGC+ISN KFA LW+ VNV+VNFGFGMR+INF+LSH EYRLEL EN+W+IELH PR Q KYLLIQL +PR+F++ I D + + P FNFFK+VPDDQWVRTTDFTPS+ IGQSTGLC+EL Y LP+F++NF YYKESE FVLE+G AYSR+ LVPIVGPP G+ LPYEILFKINLLVQNGC++GP L+SNFYR VDP+R S++ IEHALDKLYH KECCYEPS WL +QYRKY++SR+ S AISLDDGLVYVHRVQVTP +VYFCGPEINVSNRVLRH+R IDNFLR+SF+DEDL++I+STDL PR SA RT IYTRILSTLRNGI+IGD+KFEFLAFSSSQLRE+SAWMFAS GLTAA IREWMGNFR+IRNVAKYAARLGQSF SS ETLSV + EMEIIPD+++E G TKYVFSDGIGK+SAEFAR+VASKCGLK PSAFQIRYGGYKGVVA DPTSSKKLSLR+SMRKYES++ KLDVL WSKYQPC+LNRQ+I+LLSTLG+ D +FEKKQREAV QLDAILTDPL+AQEALELMSPGENTNILKE+L+C YKPDAEPFLSMMLQTFRASKLLELRTKTRI+IP+ RSMMGCLDETRTLNYGQVFVQ S AG R L +S ++SS+ S + +V+G +VVAKNPCLHPGDVRVL+AVNVPALHHM+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP Q+ PMDY PAQ++QLDHDV +E++EEYFTNYIVNDSLGIIANAHTVFADREP+KA S+PCLQLAE+FSIAVDFPKTGVPAEIP HLYVKEYPDFMEKPDKPTYES NVIGKLF+AVK+I+PH S + FT +VAR+SYDPDMEVDGFED+IDDA YHK YDYKLGNLMDYYGIKTEAEIL+G IMKMSKSFTKRRDAEAIGMAV++LRKEAR F EK S SD+ +DD YAKASAWYHVTYH YWG YN+G+NRDHFLSFPWCVYD+L++IK+DK SI ++ +LE Q +GL +Y Sbjct: 1 MGKTIRVFGFPGSVTSEVVKEFLELYTGEGTIYAIKIRQAKANRGGVPKAYAIVQFTTNEIAESIMSLARRN--LRYGTSYLKAWEMERDIVPKPRTFMHSMEDITLYFGCQISNDKFAFLWKAVNVSVNFGFGMRRINFILSHQDVEYRLELACENVWQIELHRPRGQRAKYLLIQLFSSPRVFKREICFSDHVLDDPSFNFFKDVPDDQWVRTTDFTPSSCIGQSTGLCLELAYNSNLPNFRDNFPYYKESEGTFVLESGCAYSRNYQLVPIVGPPYGVDLPYEILFKINLLVQNGCLSGPTLNSNFYRFVDPHR--FSMTFIEHALDKLYHSKECCYEPSVWLNEQYRKYISSRNMLRSHAISLDDGLVYVHRVQVTPCKVYFCGPEINVSNRVLRHYRGYIDNFLRVSFVDEDLERIYSTDLCPRTYSANGERRTEIYTRILSTLRNGIVIGDKKFEFLAFSSSQLRENSAWMFASIDGLTAAGIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVGIHEMEIIPDIEVERGGTKYVFSDGIGKISAEFARRVASKCGLKGVSPSAFQIRYGGYKGVVAVDPTSSKKLSLRNSMRKYESDIRKLDVLGWSKYQPCYLNRQIITLLSTLGVQDHVFEKKQREAVDQLDAILTDPLRAQEALELMSPGENTNILKEMLLCNYKPDAEPFLSMMLQTFRASKLLELRTKTRIYIPSARSMMGCLDETRTLNYGQVFVQFSSAGCRHLSDDSIMYSSNGSVRHCVVEGDIVVAKNPCLHPGDVRVLRAVNVPALHHMIDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDHELIPSWQEQPMDYNPAQTVQLDHDVTMEEVEEYFTNYIVNDSLGIIANAHTVFADREPQKAMSKPCLQLAEQFSIAVDFPKTGVPAEIPQHLYVKEYPDFMEKPDKPTYESHNVIGKLFQAVKNISPHESFLSSFTCKVARQSYDPDMEVDGFEDYIDDAFYHKEYYDYKLGNLMDYYGIKTEAEILSGGIMKMSKSFTKRRDAEAIGMAVKSLRKEARGLFNEKGSVSDSGDDDVYAKASAWYHVTYHHTYWGRYNEGLNRDHFLSFPWCVYDKLIKIKRDKRSIRSSLDLSSLEHQLNRGLYLY 1135
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A1S8ACR1|A0A1S8ACR1_CITLI (RNA-dependent RNA polymerase OS=Citrus limon OX=2708 PE=3 SV=1) HSP 1 Score: 1783.07 bits (4617), Expect = 0.000e+0 Identity = 856/858 (99.77%), Postives = 858/858 (100.00%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIE 858 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISN+KFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDE+EIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIE Sbjct: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIE 858
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A5C7HJV7|A0A5C7HJV7_9ROSI (RNA-dependent RNA polymerase OS=Acer yangbiense OX=1000413 GN=EZV62_018378 PE=3 SV=1) HSP 1 Score: 1729.53 bits (4478), Expect = 0.000e+0 Identity = 842/1140 (73.86%), Postives = 968/1140 (84.91%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLR---TPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK---SGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA--FPALEQQFRQGLRMY 1132 MGKTI+VFGFP VT+E VK FLES TG GTVYA+K+R ++GV + YAIVQFT E A+ I+SLA +++L +G S L A MEQD VP+PRTF+ +ME I L+ GC+ISN KFA LW+ VNV+VNFG GMR+INF+LSH EYRLEL YEN+W+IELH R Q KYLLIQL G PR+F++ IRS + + P+ + K+VPDDQWVRTTDFTPS+ IGQSTG C EL Y +LP+F+++F YYKESE FVLETG AYS + LVPIVGPP G LPYEILFKINLLVQNGC++GP LDSNFYRLVDP R S++ I++ALDKLY LKECCYEPS WL +QY+KY +SR+ S AISL DGLVYVHRVQVTP +VYFCGPEINVSNRVLRH++R IDNFLR+SF+DEDL+K++STDL PR SA RT IYTRILSTLRNGI+IGD+KFEFLAFSSSQLRE+SAW+FAS GLT+A+IREWMGNFR+I+NVAKYAARLGQSF SS ETL V +EMEIIPD+++E G TKYVFSDGIGK+SAEFAR+VASKCGLK PSAFQIRYGGYKGVVA DPTSSKKLSLR+SM KYES+ KLDVL WSKYQPC+LNRQ+I+LLSTLG+ D IFEKKQREA+ QLDAILTDPLKAQEALELMSPGENTNILKE+L+C YKPDAEPFLSMMLQTFRASKLLELRT+ RI++ RSMMGCLDETRTLNYGQVFVQ+S AG R L +S L S++ S +R+I +G +VVAKNPCLHPGDVRVL+AVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIP +Q+ P DY PAQ++QLD DV +E++EEYFTNYIVNDSLGII+NAHTVFADREP+KA S+PCLQLA++FSIAVDFPKTGVPAEIP HL+VKEYPDFMEKPDKPTYES NVIGKLFR VK+I+PH S FT+EVARRSYDPDMEVDGFED+IDDA Y+K NYDYKLGNLMDYYGIKTEAEIL+G IMKMSKSFTKRRD EAIGMAV++LRKEAR F EK S S +DD YAKASAWY+VTYH YWG YN+G+NRDHFLSFPWCVYD+L++IK+DK SI N+ +LE+Q +GL +Y Sbjct: 33 MGKTIRVFGFPGSVTSEVVKKFLESYTGEGTVYAIKVRQARAKREGVPKAYAIVQFTANENAELIMSLAS-SQRLRHGISNLRAWEMEQDIVPKPRTFLCSMEDIILYIGCQISNDKFAFLWKAVNVSVNFGSGMRRINFILSHQQVEYRLELTYENVWQIELHRRRGQRAKYLLIQLFGCPRVFKRDIRSSGQVLDDPLLIYLKDVPDDQWVRTTDFTPSSCIGQSTGFCFELAYNFKLPNFQDHFPYYKESEGTFVLETGYAYSLNHQLVPIVGPPCGADLPYEILFKINLLVQNGCLSGPTLDSNFYRLVDPRR--FSMTFIDNALDKLYQLKECCYEPSVWLNEQYKKYFSSRNMLRSHAISLVDGLVYVHRVQVTPCKVYFCGPEINVSNRVLRHYKRYIDNFLRVSFVDEDLEKMYSTDLCPRTYSADGERRTEIYTRILSTLRNGIVIGDKKFEFLAFSSSQLRENSAWLFASIDGLTSADIREWMGNFRQIKNVAKYAARLGQSFGSSTETLDVGTNEMEIIPDIEVERGGTKYVFSDGIGKISAEFARRVASKCGLKGVSPSAFQIRYGGYKGVVAVDPTSSKKLSLRNSMSKYESDFRKLDVLGWSKYQPCYLNRQIITLLSTLGVQDHIFEKKQREALDQLDAILTDPLKAQEALELMSPGENTNILKEMLLCNYKPDAEPFLSMMLQTFRASKLLELRTRARIYLARARSMMGCLDETRTLNYGQVFVQLSSAGCRHLSDDSVLSSTNGSVRRYIAEGNIVVAKNPCLHPGDVRVLRAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPSRQEKPTDYNPAQTIQLDRDVTMEEVEEYFTNYIVNDSLGIISNAHTVFADREPQKAMSKPCLQLAKQFSIAVDFPKTGVPAEIPHHLHVKEYPDFMEKPDKPTYESHNVIGKLFRMVKNISPHGSFPSSFTREVARRSYDPDMEVDGFEDYIDDAFYNKNNYDYKLGNLMDYYGIKTEAEILSGGIMKMSKSFTKRRDEEAIGMAVKSLRKEARGLFNEKGSVSDSGDDDDVYAKASAWYYVTYHHSYWGRYNEGLNRDHFLSFPWCVYDKLIKIKRDKRSIRNSLDLSSLERQLSRGLYLY 1169
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A2C9UFK1|A0A2C9UFK1_MANES (RNA-dependent RNA polymerase OS=Manihot esculenta OX=3983 GN=MANES_15G135600 PE=3 SV=1) HSP 1 Score: 1724.91 bits (4466), Expect = 0.000e+0 Identity = 835/1135 (73.57%), Postives = 966/1135 (85.11%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA--FPALEQQFRQGLRM 1131 MGKT+QV+GFP+ VTA+AVK FLES TG GT+YA+K+R KKG R YAIVQF T E A+ II L T++LWYG SYL AR M+ D VP+PRTF H+MEHI LHFG ++S + F VLW+G +V VNFG GMRK++F LSH G EY+L+L YE+IW+IELH PR Q KYL+IQL GAPRIF+K R +YE P+FNFFK+ DDQW+RTTDFTPS IG S+ LC+ELP L++P F++NFAYYKE E +F+L +GSA+SR+LDLVPIVGP G +PYEILF++NLLVQNGC+ GP LD+ FY+LVDP R VSI CIEHAL+KL HLKECCYEPSRWL +QY KY+TS++ SP+ISLD GLVYV RVQ+TP +VYFCGPE+NVSNRVLRH+ I NFLR+SF+DEDL+KIHSTDLSPR SS + RT IY RILSTL+NGI+IG +KFEFLAFSSSQLRE+S WMFASRYGLTAA+IR+WMGNFR+IRNVAKYAARLGQSFSSS ETLSV DE+EIIPD++IE G+ KYVFSDGIGK+SAEFA++VA KCGLK PSAFQIRYGGYKGVVA DPTSSKKLSLR SM KYESE TKLDVLA+SKYQPCF+NRQLI+LLSTLG+ D IFEKKQREAV QL+A+LTDPL+A EAL+LM PGE TNILKE+L+CGY+PDAEPFLSMMLQTFRASKLL+LR KTRIF+PNGRSMMGCLDETRTL YGQVFVQ SGA + QL S +F +RS QRF+++G VVVAKNPCLHPGDVRVL+AVNVPAL HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD LIP + PPMDYTP ++QLDHDV IE++EEYFTNYIVNDSLGIIANAHTVFAD EP KA S C++LA KFSIAVDFPKTGVPAEIP HL+VKEYPDFMEKPDKP Y S+ VIGKLFR V+D+APHTS I+ FT EVARR YDPDMEVDGFED++DDA Y K +YD+KLGNLMDYYGI+TEAEIL+G+I+KMSKSFTKRRDAEAIGMAVR+LRKEAR+WF EK SG D+E DD YAKASAWY+VTYHP YWGCYN+GM RDHFLSFPWCVYD+L++IK++ S+ + +LE+QF GL++ Sbjct: 1 MGKTVQVYGFPSSVTADAVKSFLESHTGEGTIYAIKIRDTKKGGPRKYAIVQFMTVEDAEHIIFLT--TKRLWYGTSYLKARPMDLDIVPKPRTFFHSMEHITLHFGNQLSKENFYVLWKGTDVLVNFGSGMRKLHFYLSHHGVEYKLDLSYESIWQIELHRPRGQSVKYLVIQLYGAPRIFEKDTRPSWNVYEDPLFNFFKDTSDDQWIRTTDFTPSCLIGHSSALCLELPSSLQVPKFQDNFAYYKEIEGKFLLHSGSAFSRNLDLVPIVGPSAGFDIPYEILFQVNLLVQNGCLPGPALDAKFYKLVDPSR--VSIVCIEHALEKLLHLKECCYEPSRWLNEQYIKYLTSKNHTKSPSISLDSGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHYPEYISNFLRVSFVDEDLEKIHSTDLSPRSSSENEDRRTLIYKRILSTLQNGIVIGKKKFEFLAFSSSQLRENSCWMFASRYGLTAADIRDWMGNFRQIRNVAKYAARLGQSFSSSTETLSVSRDEIEIIPDIEIERGRMKYVFSDGIGKISAEFAKRVALKCGLKGFSPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMCKYESENTKLDVLAYSKYQPCFINRQLITLLSTLGVPDHIFEKKQREAVDQLNAMLTDPLRAHEALDLMYPGEITNILKEMLLCGYEPDAEPFLSMMLQTFRASKLLDLRMKTRIFLPNGRSMMGCLDETRTLEYGQVFVQFSGARHMQLFDSSFMFGGNRSDQRFVIEGKVVVAKNPCLHPGDVRVLRAVNVPALDHMVDCVVFPQKGQRPHPNECSGSDLDGDIYFVCWDPNLIPSRLIPPMDYTPEPTVQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADMEPDKAMSASCIELAHKFSIAVDFPKTGVPAEIPSHLHVKEYPDFMEKPDKPMYVSEKVIGKLFREVRDMAPHTSSIKSFTLEVARRCYDPDMEVDGFEDYVDDAFYFKSSYDFKLGNLMDYYGIRTEAEILSGNILKMSKSFTKRRDAEAIGMAVRSLRKEARSWFNEKGSGVDSEADDVYAKASAWYYVTYHPTYWGCYNEGMQRDHFLSFPWCVYDKLIQIKRNNASVRRSLNLSSLERQFSLGLQL 1131
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A6M2EWH1|A0A6M2EWH1_9ROSI (RNA-dependent RNA polymerase OS=Populus davidiana OX=266767 PE=3 SV=1) HSP 1 Score: 1720.29 bits (4454), Expect = 0.000e+0 Identity = 820/1135 (72.25%), Postives = 958/1135 (84.41%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA--FPALEQQFRQGLRM 1131 M KT+QV+GFP+ TA AV+ FLES GGGTV ALK+R + R YAIVQFTT AA+ IISLA ++LWYGRSYLNAR M++D +P+PR+F+HTME + LHFG + S +KF+ LW G NV+V FG GMRK++F LSH EY+L L +ENIW+IELH PR Q KYLLIQL GAPRI+++ + S ++E P+ N+F++VPD+QWVRTTDFTPS IG S+ LC+ELP L+LP+F ENF YYKE+E FVLE+GS +SR+ DLVPIVGP G+ LPY ILF++NLLVQNGC+AG +LD FYRLVDP R PV CIE+AL+KLYHLKECCYEPS+W +QY+KY+TS + P SP +SLD GLVYV++VQ+TP +V+FCGPE+NVSNRVLRH+ DIDNFLR+SF+DE+L+KIHSTD+SPR SS ++ RT IY RILSTL+NGI+IGD+KFEFLAFSSSQLRE+S WMFASR GLTAA+IR WMG+F IRNVA+YAARLGQSFSSS ETLSVH E+EIIPD+++ T Y+FSDGIGK+SAEFARKVA KCG K PSAFQIRY GYKGVVA DPTS+KKLSLR SM KYESE TKLDVLA SKYQPCFLNRQLI+LLSTLG+ D FE+KQREAV QLDAILTDPL+AQEALELMSPGENTNILKE+L+CGY+PDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTL +GQVFVQ SG+ +R + S +FS Q ++++G VVVAKNPCLHPGDVR+LKAV+VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP QQ PMDYTP ++QLDHDV IE++EEYFTNYIVNDSLGIIANAHT FAD+E KA SEPC++LA KFSIAVDFPKTGVPAEIP +L +EYPDFMEKPDKP+YES+NVIGKLFR VKDIAP TS IR FT +VAR YDPDMEVDGFED+IDDA Y+K NYDYKLGNLM+YYGIKTEAE+L+GS MKMSKSFTK+RDAEAIGMAVR+LRKEAR+WF EK SG D++ DD AKASAWYHVTYH +YWGCYN+GMNRDHFLSFPWCVYD+L++IK++ I + P++E+QF +GL + Sbjct: 1 MSKTVQVYGFPSSTTAGAVQVFLESHIGGGTVEALKIRETRTRGARKYAIVQFTTTRAAEQIISLA--NQRLWYGRSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSALWSGNNVSVTFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIYEREVPSSLNVFEDPLLNYFRDVPDEQWVRTTDFTPSCCIGHSSSLCLELPSHLQLPNFNENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVR--CIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRHYPEDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRVWMGSFHRIRNVARYAARLGQSFSSSTETLSVHRHEIEIIPDIEVSREGTTYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTKKLSLRLSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAILTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVQFSGSRFRNSYDSSDMFSERGRGQCYLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKEALKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRPREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARHCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRNSARIRRSLNLPSVERQFNRGLHL 1131
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A2N9GXI3|A0A2N9GXI3_FAGSY (RNA-dependent RNA polymerase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31963 PE=3 SV=1) HSP 1 Score: 1719.13 bits (4451), Expect = 0.000e+0 Identity = 817/1134 (72.05%), Postives = 967/1134 (85.27%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSI--GNAFPALEQQFRQGLRM 1131 MGKTIQ+ GFP+ VTAEAVK+F+E TG GT+YA+K+R K YAI+QFT+ +AD+II+LA R +LWYGRSYL AR +++D VP+PRTF+H++E+I+LH GC+IS+ KFA+LW V+V+VNFG G+ K+ F LSH EY+LEL YENIW+IELH R Q KYLLIQL GAPRI++KG+R+ E P++N+F+ PDDQWVR TDFTPS +GQS+ LC+ELPY +LP+F+ENFAYYKESE+R+VLE GS++S ++DLVPIVGPP G+ALPYEILFKIN LVQ GC+AGP LD++FYRLVDP R ++I+CI+ AL+KL+ LKECCYEPSRWL DQYR Y+ S++ P SPAISLD GLVYVHRVQ+TP +VYFCGPEINVSNRVLR++ DIDNFLR+SF+DE+L+K++STDLSPR S + +T +Y RILS LRNGI+IGD+KFEFLAFSSSQLRE+S WMFASR G AA+IREWMGNFR+IRNVAKYAARLGQSFSSS ETL+V DE+EIIPDV++ KYVFSDGIGK+SA+FARKVA KC + PSAFQIRYGGYKGVVA DPTSS KLSLR SM KYESE TKLDVLA++K+QPCFLNRQLI+LLSTLG+ D +FE+KQREAV QLDAILTDPL+AQEAL+LMSPGENTN+LKE+L+CGY+PD+EPFLSMMLQTFRASKLLELRTKTRIFIP+GR+MMGCLDETRTL YGQVFVQ S +RQL+ + S++SSS S Q F+V+G +VVAKNPCLHPGDVRVLKAVNVPAL H+VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PP+Q PMDY PA + +LDHDV IE+++EYFTNYIVNDSLGIIANAHT FADREP KA S PC++LA+ FSIAVDFPKTG+PA IP HL+VK+YPDFMEKPDKPTYES NVIGKLFR VKDIAP TS I+ FT EVAR+SYDPDM+VDG+ED IDDA Y+K NYD+KL N+MDYYGIKTEAEIL+G+IM+M+KSFTKRRDAEAI MAVR+LRKEARAWF EK S + +DD YAKASAWY+VTYHP YWG YN+GMNRDH+LSFPWCVYD+L+ IK+ K SI +LE QF +GL + Sbjct: 1 MGKTIQLNGFPSTVTAEAVKEFVERHTGEGTIYAIKIRQCKGVRPGAYAIIQFTSTGSADSIITLASR--RLWYGRSYLKARELQRDIVPKPRTFLHSIENIKLHLGCQISHHKFAILWTAVDVSVNFGIGLGKLQFFLSHNNVEYKLELYYENIWQIELHRSRDQTAKYLLIQLYGAPRIYEKGVRTSGNELEDPIYNYFQHTPDDQWVRATDFTPSCCVGQSSSLCLELPYGHQLPNFRENFAYYKESEERYVLERGSSFSSNMDLVPIVGPPPGVALPYEILFKINFLVQTGCLAGPTLDNSFYRLVDPNR--MNIACIKFALEKLFSLKECCYEPSRWLNDQYRNYLRSKNPPKSPAISLDSGLVYVHRVQITPCKVYFCGPEINVSNRVLRNYPEDIDNFLRVSFVDEELEKMYSTDLSPRTSFGNEDRKTGLYRRILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMFASRIGPNAADIREWMGNFRQIRNVAKYAARLGQSFSSSTETLNV--DEIEIIPDVEVVRDGVKYVFSDGIGKISAKFARKVALKCSCQGYTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMSKYESENTKLDVLAFTKFQPCFLNRQLITLLSTLGVQDYVFEEKQREAVEQLDAILTDPLRAQEALDLMSPGENTNVLKEMLMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIPDGRAMMGCLDETRTLEYGQVFVQFSANRHRQLYNDFSMYSSSGSDQHFVVEGEIVVAKNPCLHPGDVRVLKAVNVPALRHLVDCVVFPQKGFRPHPNECSGSDLDGDIYFVCWDPELLPPRQIEPMDYNPAPTQELDHDVTIEEVQEYFTNYIVNDSLGIIANAHTAFADREPSKAMSTPCIELAKLFSIAVDFPKTGIPAIIPQHLHVKDYPDFMEKPDKPTYESLNVIGKLFREVKDIAPKTSSIKSFTAEVARKSYDPDMKVDGYEDFIDDAFYYKTNYDFKLVNIMDYYGIKTEAEILSGNIMRMAKSFTKRRDAEAITMAVRSLRKEARAWFNEKESEGEGDDDVYAKASAWYYVTYHPSYWGLYNEGMNRDHYLSFPWCVYDKLIHIKR-KASIRRDQNLSSLELQFNRGLHL 1127
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A4U5NL24|A0A4U5NL24_POPAL (RNA-dependent RNA polymerase OS=Populus alba OX=43335 GN=D5086_0000263050 PE=3 SV=1) HSP 1 Score: 1714.12 bits (4438), Expect = 0.000e+0 Identity = 816/1135 (71.89%), Postives = 959/1135 (84.49%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA--FPALEQQFRQGLRM 1131 M KT+QV GFP+ TA V+ FLES TGGGTV A+K+R + R YAIVQFTT AA+ IISLA ++LWYG SYLNAR M++D +P+PR+F+HT+E + LHFG + S +KF+ LW G NV+VNFG GMRK++F LSH EY+L L +ENIW+IELH PR Q KYLLIQL GAPRI+++ + S ++E P+ N+F++VPD+QWVRTTDFTPS IG S+ LC+ELP L+LP+F ENF YYKE+E FVLE+GS +SR+LDLVPIVGP G+ LPY ILF++NLLVQNGC+AG +LD FYRLVDP R PV CIE+AL+KLYHLKECCYEPS+W +QY+KY+TS + P SP +SLD GLVYV++VQ+TP +V+F GPE+NVSNRVLR + DIDNFLR+SF+DE+L+KIHSTD+SPR SS ++ RT IY RILSTL+NGI+IGD+KFEFLAFSSSQLRE+S WMFASR GLTAA+IR WMG+F +IRNVA+YAARLGQSFSSS ETLSV E++IIPD+++ T+Y+FSDGIGK+SAEFARKVA KCG K PSAFQIRY GYKGVVA DPTS+KKLSLR SM KYESE TKLDVLA SKYQPCFLNRQLI+LLSTLG+ D FE+KQREAV QLDAILTDPL+AQEALELMSPGENTNILKE+L+CGY+PDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDET TL YGQVFVQ SG+ ++ L+ S +FS Q ++++G VVVAKNPCLHPGDVR+LKAV+VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP QQ PMDYTP ++QLDHDV IE++EEYFTNYIVNDSLGIIANAHT FAD+E KA SEPC++LA KFSIAVDFPKTGVPAEIP +L +EYPDFMEKPDKP+YES+NVIGKLFR VKDIAP TS IR FT +VARR YDPDMEVDGFED+IDDA Y+K NYDYKLGNLM+YYGIKTEAE+L+GS MKMSKSFTK+RDAEAIGMAVR+LRKEAR+WF EK SG D++ DD AKASAWYHVTYH +YWGCYN+GMNRDHFLSFPWCVYD+L++IK++ + I + P++E+QF +GL + Sbjct: 29 MSKTVQVSGFPSCTTAGVVQVFLESHTGGGTVEAVKIRETRTRGARKYAIVQFTTTRAAEQIISLA--NQRLWYGHSYLNARPMDRDIIPQPRSFLHTVESVTLHFGYQTSKEKFSALWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIYEREVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCCIGHSSSLCLELPSHLQLPNFNENFFYYKENEGTFVLESGSTFSRNLDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVR--CIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFFGPEVNVSNRVLREYPEDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRGWMGSFHQIRNVARYAARLGQSFSSSTETLSVRRHEIKIIPDIEVSREGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTKKLSLRRSMLKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAILTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETITLEYGQVFVQFSGSRFQNLYDSSDMFSERGRGQCYLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKEALKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRPREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARRCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRNSSRIRRSLNLPSVERQFSRGLHL 1159
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: B9HJH7|B9HJH7_POPTR (RNA-dependent RNA polymerase OS=Populus trichocarpa OX=3694 GN=POPTR_008G136100 PE=3 SV=1) HSP 1 Score: 1710.27 bits (4428), Expect = 0.000e+0 Identity = 813/1136 (71.57%), Postives = 957/1136 (84.24%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTS---IGNAFPALEQQFRQGLRM 1131 M KT++V GFP+ TA AV+ FLES TGGGTV ALK+R + G R YAIVQFTT AA+ IISLA +LWYG SYLNAR M++D +P+PR+F+HTME + LHFG + S +KF+ +W G NV+VNFG GMRK++F LSH EY+L L +ENIW+IELH PR Q KYLLIQL GAPRI+++ + S ++E P+ N+F++VPD+QWVRTTDFTPS IG S+ LC+ELP L+LP+F ENF YYKE+E FVLE+G +SR+ DLVPIVGP G+ LPY ILF++NLLVQNGC+AG +LD FYRLVDP R PV CIE+AL+KLYHLKECCYEPS+W +QY+KY+TS + P SP +SLD GLVYV++VQ+TP +V+FCGPE+NVSNRVLR +R DIDNFLR+SF+DE+L+KIHSTD+SPR SS ++ RT IY RILSTL+NGI+IGD+KFEFLAFSSSQLRE+S WMFASR GLTAA+IR WMG+F +IRNVA+YAARLGQSF SS ETLSV E+EIIPD+++ G T+Y+FSDGIGK+SAEFARKVA KCG K PSAFQIRY GYKGVVA DPTSSKKLSLR SM KYESE TKLDVLA SKYQPCFLNRQLI+LLSTLG+ D FE+KQREAV QLDA+LTDPL+AQEALELMSPGENTNILKE+L+CGY+PDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTL +GQVFV+ SG+ +R L+ S +FS Q ++++G VVVAKNPCLHPGD+R+LKAV+VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP QQ PMDYTP +QLDHDV IE++EEYFTNYIVNDSLG+IANAHT AD+E KA SEPC++LA KFSIAVDFPKTGVPAEIP +L +EYPDFMEKPDKP+YES+NVIGKLFR VKDIAP TS IR FT +VAR+ YDPDMEVDGFED+IDDA Y+K NYDYKLGNLM+YYGIKTEAE+L+GS MKMSKSFTK+RDAEAIGMAVR+L+KEAR+WF EK SG D++ DD AKASAWYHVTYH +YWGCYN+GMNRDHFLSFPWCVYD+L++IK+ ++ P++E+QF +GL + Sbjct: 1 MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAEQIISLA--NPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVR--CIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHL 1132
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Match: A0A6A1UZQ4|A0A6A1UZQ4_9ROSI (RNA-dependent RNA polymerase OS=Morella rubra OX=262757 GN=CJ030_MR7G027952 PE=3 SV=1) HSP 1 Score: 1699.87 bits (4401), Expect = 0.000e+0 Identity = 812/1135 (71.54%), Postives = 953/1135 (83.96%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKE-KSGSDT-EDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA--FPALEQQFRQGLRM 1131 MGKTIQ++GFP+ V+AE VK FLE +TG GTVYA+K+R + G R YAI+QFT A+ IISLA +LWYG SYL AR M+ D V RPRTF+H++++I LHFGC+IS ++F LW+ VNV+VNFG G+RK+ F L+H EY+LEL YENIW+IELH P Q+ KYLLIQL GAPRI++K RS +YE P NFFK+ PDDQWVR DFTPS IGQS+ LC+ELPY LP+F ENFAYYKESE R+VLE G+ ++ +LDLVP+VGPP GI LPYEILFKIN LVQNGC+AGP LD +FYRL+DP + + + IEHAL+KL +LKECCY+PSRWL++QYR Y+ SR SPAISLD GLVY+ RVQ+TPSR+YFCGPEINVSNRVLRHF +DNFLR+SF+DE+LDK++STDLSPR SS RT IY RILS LRNGI I +KFE LAFSSSQLR++S WMFA R GLTAA+IR+WMG+FR+I+NVAKYAARLGQSF SS ETLSV E+E IPD++++ G+ KYVFSDGIGK+SAEFA+KVA KCG K + PSAFQIRYGGYKGVVA DPTSS+KLSLR SM KYES+ TKLDVLA+SK+QPCFLNRQLI+LLSTLG+ D +FE KQR+AV QLDAILTDPLKAQEAL+LMSPGENTNILKE+L+CGYKP+AEPFLSMMLQTFRASKLLEL+ KTRIFIP+GR+MMGCLDETRTL YGQVFVQ SG ++Q S++F SS Q +++G VVVAKNPCLHPGDVRVL+AVNVPALHH+VDCVVFPQ+G RPHPNECSGSDLDGDIYFVCWD ELIPPQQ PMDY+PAQS+QL++DV IE++EEYF +YIVNDSLGIIANAHT FAD+EP KA S PC++LA FSIAVDFPKTGVPAEIPP L+VKEYPDFMEKPDKPTYES NVIGKLFR VKDIAP ++ R F+ E+ARRSYD DMEVDGFED IDDA YHK NYDYKLGNLMDYYGIKTEAEIL+G+I++M+K FTKRRDAEAI +++R+LRKEARAWF E +S +D+ DD YAKASAWY+VTYHP YWGCYN+GMNRDHFLSFPWCVYD+L++IKKD++SI A +LE QF GL++ Sbjct: 1 MGKTIQLYGFPSSVSAENVKVFLEQQTGEGTVYAIKIRPTRNGGQRAYAIIQFTATRHAEHIISLA--NARLWYGSSYLKAREMDLDIVARPRTFLHSLQNITLHFGCQISTERFLSLWKTVNVSVNFGTGLRKVQFFLAHNHVEYKLELYYENIWQIELHRPSGQIAKYLLIQLYGAPRIYEKDSRSSGAVYEDPFLNFFKDTPDDQWVRAIDFTPSCCIGQSSSLCLELPYGQRLPNFAENFAYYKESEGRYVLEIGATFACNLDLVPVVGPPPGIDLPYEILFKINSLVQNGCLAGPTLDVSFYRLLDPRK--FNTAHIEHALEKLNYLKECCYDPSRWLSEQYRMYLRSRHPLRSPAISLDSGLVYMRRVQITPSRIYFCGPEINVSNRVLRHFTDYLDNFLRVSFVDEELDKLYSTDLSPRTSSVNGDRRTGIYKRILSVLRNGIDIAGKKFETLAFSSSQLRDNSIWMFAPRDGLTAADIRDWMGDFRQIKNVAKYAARLGQSFGSSTETLSVGRHEIETIPDIEVKQGEVKYVFSDGIGKISAEFAKKVALKCGCKCSSPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMLKYESDNTKLDVLAFSKFQPCFLNRQLITLLSTLGVEDWVFENKQRQAVEQLDAILTDPLKAQEALDLMSPGENTNILKEMLLCGYKPNAEPFLSMMLQTFRASKLLELKIKTRIFIPDGRAMMGCLDETRTLEYGQVFVQFSGTRHKQY---STMFGSSGLDQHIVIEGKVVVAKNPCLHPGDVRVLRAVNVPALHHLVDCVVFPQRGSRPHPNECSGSDLDGDIYFVCWDPELIPPQQIQPMDYSPAQSIQLNYDVTIEEVEEYFVDYIVNDSLGIIANAHTAFADKEPLKAMSTPCIELAWLFSIAVDFPKTGVPAEIPPKLHVKEYPDFMEKPDKPTYESHNVIGKLFREVKDIAPSSTSFRSFSAEIARRSYDSDMEVDGFEDFIDDAFYHKSNYDYKLGNLMDYYGIKTEAEILSGNIIRMAKYFTKRRDAEAINVSIRSLRKEARAWFNENESATDSGADDVYAKASAWYYVTYHPTYWGCYNEGMNRDHFLSFPWCVYDKLIQIKKDRSSIRRALHLSSLEHQFSYGLQL 1128
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1) HSP 1 Score: 1534.24 bits (3971), Expect = 0.000e+0 Identity = 746/1117 (66.79%), Postives = 895/1117 (80.13%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESE-DRFVLETGSAYSRSLD-LVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIG 1115 MGKTIQVFGFP GV+AE VK FLE TG GTVYA+K+R PKKG R+YAIVQFT++ II+ A E+L+YGRSYL A +EQD VP+PR +HT+ +++ FGC++S KKF LW +V V+FG GMRK++F S ++YRLEL YENIW+I+LH P+ + +K+L+IQ++GAP+IF+K + +LL+ + +F+ + D+QW+RTTDFT S+ IGQST C+ELP L +PDF+ENFA Y E F++E+GS+YS + + LVP+V PP G +LP+EILFK+N LVQN C++GP LD +FYRL++ + ++ I+H L+KL+HL ECCYEP+ WL D+Y+K+++ P SP ISLDDGLVY++RVQVTP+RVYF GPE+NVSNRVLRH+ + I+NFLR+SF+DEDL+K+ S DLSPR S+ RT++Y RI S LR+GI+IGD+KFEFLAFSSSQLRE+SAWMFA +TAA IR WMG+F IRNVAKYAARLGQSFSSS+ETL+V DE+E+IPDV+I T+YVFSDGIGK+SAEFARKVA KCGL + PSAFQIRYGGYKGVVA DP SSKKLSLR SM K+ESE TKLDVLAWSKYQPC++NRQLI+LLSTLG+ D +FEKKQRE V +LDAILT PL+A EAL LM+PGENTNILK L++CGYKPDAEPFLSMMLQ FRASKLLELRTKTRIFI GRSMMGCLDETRTL YGQV VQ S R +RFI+ G VVVAKNPCLHPGDVRVL+AVNVPAL+HMVDCVVFPQKG+RPHPNECSGSDLDGDIYFVCWD EL+PP+ PMDYTP + LDHDV IE++EEYF NYIVNDSLGIIANAHT FAD+EP KA S+PC++LA+KFS AVDFPKTGV A IP HLYVKEYPDFMEKPDKPTYES+NVIGKLFR VK+ AP I+ FT +VA +SYD DMEVDGFE+++D+A Y K NYD+KLGNLMDYYGIKTEAEIL+G IM+MSKSFTKRRDAE+IG AVRALRKE + F + AKASAWYHVTYH YWG YN+G+NRDHFLSF WCVYD+LV IK KT++G Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTRLIITAAA--ERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQKKYDRAL--IDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLSPRSSTQR---RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYS--------------DPMRPGRRFIITGPVVVAKNPCLHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEEN---ESAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIK--KTNLG 1089
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2) HSP 1 Score: 1009.98 bits (2610), Expect = 0.000e+0 Identity = 490/746 (65.68%), Postives = 589/746 (78.95%), Query Frame = 0 Query: 379 SRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDT---EDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAFPAL 1121 S VYF GPEINVSNRV+R+F DI+NFLRISF+DED +K+ +TDLSPR +S D RT +Y R+LS L +GI IG + FEFLAFSSSQLR++SAWMFASR GL A++IR WMG+FR IRNVAKYAARLGQSFSSS ETL V E+E I D+K T++VFSDGIGK+S+ FA +VA KC LK PSAFQIRYGGYKGVVA DPTS KLSLR SM K++S+ +DVLA+SKYQP FLNRQLI+LLSTLG+ D +FE+KQ EAV QL+ ++TDP A EA+ELM GE TN +KELL+CGY+PD EP+LSM+LQTFRASKLLEL+TK+RI IP GR+MMGCLDETRTL YGQVF++ + S RF V G VV+AKNPCLHPGD+R+L AV+VP LHHM +CVVFPQ+G RPHPNECSGSDLDGDIYFV WD LIPP+ PMDYTPA + LDHDV IE++EEYFTNYIVN+SLG+IANAH VFAD+E KA S PC++LA+ FSIAVDFPKTGVPA IPP L+VKEYPDFMEK DK TYES+ VIGKL+R +K PH I+ FT+EVARRSYD DM VDG+ED+I +A+ K YD+KLGNLMD+YGIK+EAEI++G I+KM+K+FTK+ DA+AI +AVR+LRKEAR+ F E S D D + AKASAWYHVTYHP++WGCYN+G R HF+SFPWC+Y++L+ IK+ + + P L Sbjct: 7 STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT--------------SGVNDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPH---IKHFTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRRKFVRKMQPEL 732
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 451/1126 (40.05%), Postives = 660/1126 (58.61%), Query Frame = 0 Query: 4 TIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVG-RLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISN-KKFAVL--WRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKY--LLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPD-GIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTS-RSKPSSPAISL-DDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDI--TRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHH--MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD------AEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKD 1110 T+++ P + A+ + FLE G TV+AL++ T + R +A VQFTT E L+ ++ KL + L D +PRP ++ I L G S+ K+F L W GV + R++ F + G+ Y++E+ +E+I E C ++ L++L P++F++ ++S + F KE D W+RTTDF+ S IG ST C+E+ + D YY+E G ++ + +VP++ G+ PYEILF++N LV ++ L ++ L+ R +S+ L KL+ CY+P ++ Q + + + P+S L + ++ R VTPS++Y GPE+ +N V+++F + +F+R++F++ED K+ + LS + +RT IY R+LS L GI +G ++FEFLAFS+SQLR +S WMFAS + A +IREWMG FR+IR+++K AAR+GQ FS+S++TL V ++E IPD+++ Y FSDGIGK+S FA++VA KCGL + PSAFQIRYGGYKGV+A D +S +KLSLRDSM K++S L+V W++ PCFLNR++I LLSTLGI D +FE Q + L +L D A L+ +S + N+L ++L+ GY P +EP+LSMML+ S+L EL+++ RI +P GR ++GC+DE L YGQV+V+++ + S F + +V G VVV KNPCLHPGD+RVL A+ +DC++FPQKG RPHPNECSG DLDGD +FV WD+++IP + DPPMDY ++ +DHDV +E+I ++F +Y+++D+LG+I+ AH V ADR+P KARS+ CL+LA S AVDF KTG PAE+P L +E+PDF+E+ +KPTY S++V GKL+RAVK VA YD +E GFE I+ A H+ Y KL +LM YYG E EILTG I+K + + R + + I ++V+ L KEA WF EKS D E ASAWY+VTY+P N + FLSFPW V D L++IK + Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRAQLLSSQS-KLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWDGVRCWI--LTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKIS--LFAASDMELIKILRG-MSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLS-HVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKI-DEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWF-EKSCED-EQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1116
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1) HSP 1 Score: 745.732 bits (1924), Expect = 0.000e+0 Identity = 430/1045 (41.15%), Postives = 621/1045 (59.43%), Query Frame = 0 Query: 87 DTVPRPRTFMHTMEHIELHFGCKISNKKF--AVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDL--LYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDG-------LVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSA--TDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLK-DNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS--YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD-------AEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIK 1108 D +PR L G +++ + F A W GV V G R+++ L H + Y+LE+ +E++ + L C M +L+QL APRI I P + + F+ KE WVR DFTP+ G+ + L ++L + D ++ + + + + S ++VP+V P ++PYE+LF++N L+ G + ++++ ++ + PV +S +K++ L+ CY P +++ Q Y RS + ++G L+ +RV +TPS+++ GPE V+N V++H +F+R++F+DED K+ S +S R + +T +Y RILS L+ G IG + FEFLAFS+SQLR +S WMFAS L A IR WMG+F IR+V+K AAR+GQ FSSS++T V ++E+IPD++I +KY+FSDGIGK+S FA++VA GL N PSAFQIRYGGYKGV+A DP SS LSLR SM+K+ESE L++ +WSK QPC++NR++ISLLSTLGI DEIF Q++ +R+ + +LT+ A L + G T ++L+ GY+P +EP+LSM+L+ + ++L ++RT+ +I +P GR ++GCLDET L YGQV+++I+ Q S F + + +V G V + KNPCLHPGD+RVL+A+ P L MVDC+VFPQ+G RPHPNECSG DLDGD+YF+ WDD+LIP + D PMDYT + +DH V +E+I+++F +Y++NDSLG I+ AH + ADR P KARS CLQLA S+AVDF KTG PAE+P L +EYPDFME+ +KP Y S V+GKL+R+ + + A+ S YDPD+EV G ++ + A + Y+ KL LM+YY + E EILTG+I +K +RD + I AV AL +EAR W S E+DA ASAWY VTYHPD +G F SFPW D L+ IK Sbjct: 96 DLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAWDGVRAEVIPG--KRRVDLYLEHDSQRYKLEVLFEDMKDC-LGCTLDGMGA-ILLQLNYAPRI-HTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSDILKSLPF-SGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQ--ELPVDVS--RRIFEKMHKLESTCYGPLQFI--QQEAYSMKRSHN---VLLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKLG-GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV-GKVAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNI--RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLL---SSRKEEDASRMASAWYRVTYHPD----RRRG---KRFWSFPWIACDNLLAIK 1111
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1) HSP 1 Score: 591.652 bits (1524), Expect = 0.000e+0 Identity = 376/969 (38.80%), Postives = 537/969 (55.42%), Query Frame = 0 Query: 187 RSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYS--RSL-------------DLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDL-SPRGSSATDIT------RTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAA--DPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQI---SGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDP--PMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKEKS------GSDTEDDAY-AKASAWYHVTYHPDYWGCYNQGM------NRDHFLSFPWCVYDRLVEIK 1108 R+ D + PV F DD W+RTTD TPS IG+ + R P Y +E V + G + R L D+ + +G+ P +LF +N LV G + L F+ L+ V+++ + + + + C + L R P + D V R+ +TP+R Y PE+ SNRVLRH+ D FLR++F+DE + +++ L S D+ +T +Y R+ L G + RK+ FLAFSS+QLR+ SAW FA T IR+WMG F +NVAK+AAR+GQ FSS+ T+++ DE++ D ++ +Y+FSDGIGK++ + A +VA + L DNPPSA+QIR+ G+KGV+A +L LR SMRK+ES L+V++W+K+QP FLNRQ+I LLS+L + D IF + Q + L+ IL+D A E L S ++ N +L G++P EP L ML R+++L +L K RIF+P GR +MGCLDE L GQ F++ S Y HG S FSS+ I+ G VV+AKNPCLHPGDVR+L+AV+VP LHH+VDC+VFPQKG RPH NE SGSDLDGD+YFV WD++LIPP + PMDY+P ++ QL V DI ++F +++++LG I NAH V AD A E C+ LAE + AVDFPKTG A +PPHL K YPDFM K D +Y+S+ ++G+L+R++++ S + ++EV + YD D+EV G D + A K +YD +L L+ Y ++TEAE++TG I + K+ +K++ + + A ALRKE ++ F+ + G D ++ Y KASAWY VTYHP W ++G+ LSF W D L IK Sbjct: 249 RTADDDFHEPV-PFDLLDDDDPWIRTTDITPSGAIGRCGVYRISFSARF-WPKMDRALDYMRERRVAIV-DCGGGWGPRRGLTVRDELEFGEPMQDVFFCLQHAEGLKFP--LLFMVNALVHKGIINQHQLTPEFFSLLGRSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARN-------PKLLCSKVGDDHAEVRRLVITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMSNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKWMGRFTS-KNVAKHAARMGQCFSSTYATVTMRPDEVDESFD---DVVHNEYIFSDGIGKITPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLT-TSCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQGQCFIRATVPSLNSYFVKHG--SRFSSTDKNTEVIL-GTVVIAKNPCLHPGDVRILEAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQE----ASNGDVVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPK-WVEKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1192
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 424/1216 (34.87%), Postives = 634/1216 (52.14%), Query Frame = 0 Query: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRL----------------------YAIVQFTTKEAADTIISLACRTEKLWYGRSY-----------LNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWR--GVNVTVN-----FGFGMRKIN-------FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYES-PVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPP-----------DGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKY-MTSRSKPSSPAI----SLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLS-------PRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEI-IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDN-PPSAFQIRYGGYKGVVAADPTSSK--KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQL---HGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKE-----KSGSDTEDDAY--AKASAWYHVTYHPDYWGCYNQGMNRDH-----FLSFPWCVYDRLVEIK---KDKTSIGNAFPA 1120 + + GF TA+ + D+LE + G V+ +L+T G +A V F E+A + A + + G+ LN RR + TVP + + I L G +S F V WR GV+ V+ F RK + + + +Y+LEL +I + + + L++QL +PR++ + + D +Y++ P + P W+RTTDFT IG+ + + R E + Y++ R V E + + P G P +GI+ +EI+F +N ++ G L F+ L+ V+I+ ++H C Y+ R + D Y++ + +P + + + + R+ +TP+R Y PE+ +SNRVLR ++ + FLR++F+DE + I+S LS +S++ +T ++ R+ S L +G + RK+ FLAFS++QLR+ SAW FA ++I+ WMG F++ +NVAK AAR+G FSS+ T+ V E++ +PD++ + YVFSDGIG ++ + A +V K L + P A+QIRY G+KGVVA P+ S +L+LRDSM+K+ S+ T L++ +W+++QP FLNRQ+I+LLS LG+ DEIF Q + +L+ IL D A E L S E N +L G+KP EP L ML + R ++L LR K+RIF+ +GR +MGCLDE L +GQ F+Q+S HG S F +++ +V+G V +AKNPCLHPGDVR+L+AV+VP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP + P M Y A+ L V +DI ++F + N+ LG I NAH V ADR A E CL LAE + AVDFPKTG +P HL K YPDFM K D TY+S ++G+L+R VK++ + ++E S YD +E+ GFED I +A HK YD +L L+ Y ++ E EI+TG I M K +K++ E + + +L+KE R F+E ++ S+ E + KASAWYHVTYHP++ + + D LSF W D L IK ++ SI +A P Sbjct: 15 VSIGGFGESTTAKQLTDYLEDEVG--IVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRR--RTTVP------YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQY--KTLHGFVLILQLASSPRVWYRT--ADDDIYDTVPGDLLDDDDP---WIRTTDFTQVGAIGRCHSYRVLISPRYE-NKLRTALDYFRM---RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS--FEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYK--RPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLT-ASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHG--SRFKETKTDLE-VVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA--EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPV 1185
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDP1_SCHPO (RNA-dependent RNA polymerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rdp1 PE=1 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 1.170e-105 Identity = 244/785 (31.08%), Postives = 401/785 (51.08%), Query Frame = 0 Query: 369 VYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSL------RDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEAL-ELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRT---------LNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQ-LDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFA---DREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFE-DHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIM---KMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSG---------SDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAF 1118 +++ ++ VTP+ + + NRV+R+F+ + F+R+ DE + RG S ++Y+RI L GI +G++ +EFLAF +SQLRE A+ FAS L A +IREWMG+F EI +V+KYAAR+GQ FS++KE ++ + ++ +I + + F+DG+G S R+++ + D PSAFQ R GGYKGV++ P + + R S K++S + L+V+ S++ LN QLI+LL LG+ +F + R + +++ + K+ L + + +T I+ + + G+ + F +L + L ++ K ++ +P G ++G DET T L+ ++F+QI+ +S+ + + R IV GL +VA+NP LHPGDVRV KAV L H+ + +VFP G R P CSG DLDGD Y V WD L+P + P ++ +P +S+ L+ I+ ++E+F NYI DSLG+I+NA +A D P CL+LAE S AVDF K+GV ++ + K YPDFM+K ++ S+ +GK+FR + + + YDP M++ F+ ++++ A K +YD L ++M + I TE E+ T I+ ++K+ + E + L+K+ + EK S+ E+ + +A Y VTY N + +SFP+ RL ++ + N F Sbjct: 452 IHIKKLYVTPTTLRIVEDSLEAGNRVIRNFKDFANRFMRVQITDEYYKQ------KIRGGS-DGFRNEKLYSRIQQLLTYGIKVGNQIYEFLAFGNSQLREHGAYFFASGSDLNAKQIREWMGDFSEINSVSKYAARMGQCFSTTKE-----INRFCVDISLQDDIVRNNHCFTDGVGMASLSVIRRLSLEVKNHDMFPSAFQFRMGGYKGVLSLAPPTKLEYHQGNLVFPRRSQDKFKSFHSTLEVIKISRFSNAHLNMQLITLLEGLGVEKTVFLELTRSQLSKMNESINSKQKSILMLRDNVDEYHSTLIIADFIQAGFLERDDAFTENLLNLYYEWVLRLIKEKQKVSVPKGAYLLGVADETGTLKGHYDDAVLSVPEIFIQITDTS-----TSFGSYSTGKLKTRVIV-GLCIVARNPSLHPGDVRVCKAVRCDELMHLKNVIVFPTTGDRSIPAMCSGGDLDGDEYTVIWDQRLLPKIVNYPPLLESSPKKSIDFLEGKPLIDSVKEFFVNYIKYDSLGLISNAWKAWAHDHDNNPEGIFGNVCLELAEMHSKAVDFAKSGVACKMQAKYHPKRYPDFMQKTKTRSFRSETAVGKIFRYAARFQRESGRPATYN-PIMNTVYDPCMKLPRFKTEYLNVAEEVKKHYDNDLRSIMARFDISTEYEVYTAFILFKDDLAKTVNEYGLREEVSFQFDLLKKKYTQEYLEKCALSNQSAFDSSEYEERINSAVAATYDVTYDQRVKSVGNG--TTEVLISFPYLFSSRLCQLSRKAMLTANNF 1215
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR5_ARATH (Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana OX=3702 GN=RDR5 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.204e-22 Identity = 167/680 (24.56%), Postives = 270/680 (39.71%), Query Frame = 0 Query: 365 DDGLVYVHRVQVTPSRVY-------FCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAF------------SSSQLR------ESSAWM-FASRYGLTAAEIREWMGNFREIR---NVAKYAARLGQSFSSSKETLSVHM-----DEMEII----PDVKIEIGKTKY--VFSDGIGKVSAEFARKV-----ASKC--------GLKDNPPSAFQIR--YGGY--KGVVAADPT-SSKKLSLRDSMRKYE--------SELTKLDVLAWSKY-QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVD----CVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIP--PQQDPPMDYTPAQ---------SMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADR---------EPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVK 953 D G + ++ V P+ Y GP + + L D DN L + F D + SS I Y I +NGI+IG R+++F F S+ +++ +S+A+ + Y LT I E +F + +A Y AR S +K TL V M D+++ I D K + K K + SDG G +S + AR KC +PP Q R Y GY KG + + + +R SM K S L+V+ S + L++ L++LLS GI +E F + + +I + A A ++ N + +L+ P EP L L ++ +L+ ++ + +MG +D T L +V V + Q+ GE V+V +NP LH GD+ +LKA V AL V V FPQKG R +E +G D DGD+YF+ + EL+ +P + TP + + + + ++ +GI A++ DR E + + L+L + + A+D PK G +P L +P +ME+ K ++S +++G +F VK Sbjct: 198 DSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGTHLHKVLGD-DNVLTVKFADVQ-----------KSSSTYSIDHYFTYKGIA---KNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTK-TLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVG--IPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESG---QISGE------------------VLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVK 835
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR3_ARATH (Probable RNA-dependent RNA polymerase 3 OS=Arabidopsis thaliana OX=3702 GN=RDR3 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.170e-21 Identity = 149/615 (24.23%), Postives = 245/615 (39.84%), Query Frame = 0 Query: 438 IYTRILSTLRNGILIGDRKFEFLAF-------------------------SSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEM--EIIPDVKIEIGKTKYVF---------SDGIGKVSAEFAR---------------KVASK---------CGLKDNPPSAFQIR--YGGYKGVVAADPTSSKKL-----SLRDSMRK-YE-------SELTKLDVLAWSKY-QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVD----CVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIP---------PQQDPPMDYTPAQSMQLDHDVQIEDIEEYF--TNYIVNDSLGIIANAHTVFAD---------REPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAV 952 +Y+ +NGI++G R++ F F S++ + + ++FA G + E R + + ++ Y +R S +K TL V M + E I D+ K V SDG G +S + AR + SK CG PP Q R Y GY V ++KKL +R SM K YE S L+V+ S + L+R L++LLS G+ ++ F R + + I A +A ++ G++ ++++ G P EP+L L ++ L+ R I +MG +D T L ++ V + + G V+V +NP LH GD+ VLKA V AL V V FPQKG R +E +G D DGD+YF+ + +L+ P Y + +L + E++ + F + D +G+ A+ D + + R + L+L + + A+D PK G ++PP L +K +P +ME+ K + S +++G +F V Sbjct: 267 LYSTYKGIAKNGIMVGLRRYRFFVFKDGGKEEKKKDVSTKGVKCYFIRTDSTASIDMQNPYIFA---GKSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTK-TLEVDMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCG--QEPPLLIQFRIFYNGY--AVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAA--INYGDD-QYTADMILVGI-PLDEPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPTGELKENEICVILHSGQ---------------------ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTV 847
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Match: RDR4_ARATH (Probable RNA-dependent RNA polymerase 4 OS=Arabidopsis thaliana OX=3702 GN=RDR4 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.339e-20 Identity = 160/677 (23.63%), Postives = 276/677 (40.77%), Query Frame = 0 Query: 365 DDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAF------------SSSQLR-------ESSAWMFASRYGLTAAEIREWMGNFREIRNV---AKYAARLGQSFSSSKETLSVHMDEMEIIP------------DVKIEIGKTKYVFSDGIGKVSAEFAR----KVASKCGLKDN---------PPSAFQIRY----GGYKGVVAADPT-SSKKLSLRDSMRK-YE-------SELTKLDVLAWSKY-QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKT----RIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVD----CVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELI-------PPQQDPPMD--YTPAQSMQLDHDVQIEDIEEYF--TNYIVNDSLGIIANAHTVFADR---------EPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAV 952 D G + ++ V P Y R+ +F + L D+++ + L P+ S+ D Y++ +NGI++G R+++F F S+ Q++ +++ + Y L+ I E +F + + A Y AR S +K+ L V M E+ ++ DV + GK + + SDG G +S + AR + ++ N PP QIR KG+ + + + +R SM K Y+ S L+V+ S + L++ L++LLS G+ ++ F + + I A +A ++ N L ++++ G P EP+L L SKLL+L ++ I +MG +D T L +V SG Q V+V +NP LH GD+ +LKA V +L V V FPQKG R +E +G D DGD+YF+ + +L+ P P YT Q +L + E++ + F T + + +G A++ DR + + + L+L + + A+D PKTG +P + V +P +ME+ T++S +++G +F V Sbjct: 209 DSGKTHYYQCHVAPDGSY----------RLKGYFLENTGTHLHKVLGDDNVLTVRFDQL-PKESTYCD----NPYSKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPYILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKK-LEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPR-IHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTCVQEPPLLIQIRMFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNAL-QMIMAGI-PLDEPYLKHYL-----SKLLKLEKDDLKAGKLPIDESYYLMGTVDPTGELKEDEV----SGLAKSQD---------------------VLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPLDVKVDLFPHYMER--NKTFKSTSILGLIFDTV 834
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT1G14790.1 (| RNA-dependent RNA polymerase 1 | Chr1:5094317-5097817 REVERSE LENGTH=1107 | 201606) HSP 1 Score: 1534.24 bits (3971), Expect = 0.000e+0 Identity = 746/1117 (66.79%), Postives = 895/1117 (80.13%), Query Frame = 0 Query: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESE-DRFVLETGSAYSRSLD-LVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIG 1115 MGKTIQVFGFP GV+AE VK FLE TG GTVYA+K+R PKKG R+YAIVQFT++ II+ A E+L+YGRSYL A +EQD VP+PR +HT+ +++ FGC++S KKF LW +V V+FG GMRK++F S ++YRLEL YENIW+I+LH P+ + +K+L+IQ++GAP+IF+K + +LL+ + +F+ + D+QW+RTTDFT S+ IGQST C+ELP L +PDF+ENFA Y E F++E+GS+YS + + LVP+V PP G +LP+EILFK+N LVQN C++GP LD +FYRL++ + ++ I+H L+KL+HL ECCYEP+ WL D+Y+K+++ P SP ISLDDGLVY++RVQVTP+RVYF GPE+NVSNRVLRH+ + I+NFLR+SF+DEDL+K+ S DLSPR S+ RT++Y RI S LR+GI+IGD+KFEFLAFSSSQLRE+SAWMFA +TAA IR WMG+F IRNVAKYAARLGQSFSSS+ETL+V DE+E+IPDV+I T+YVFSDGIGK+SAEFARKVA KCGL + PSAFQIRYGGYKGVVA DP SSKKLSLR SM K+ESE TKLDVLAWSKYQPC++NRQLI+LLSTLG+ D +FEKKQRE V +LDAILT PL+A EAL LM+PGENTNILK L++CGYKPDAEPFLSMMLQ FRASKLLELRTKTRIFI GRSMMGCLDETRTL YGQV VQ S R +RFI+ G VVVAKNPCLHPGDVRVL+AVNVPAL+HMVDCVVFPQKG+RPHPNECSGSDLDGDIYFVCWD EL+PP+ PMDYTP + LDHDV IE++EEYF NYIVNDSLGIIANAHT FAD+EP KA S+PC++LA+KFS AVDFPKTGV A IP HLYVKEYPDFMEKPDKPTYES+NVIGKLFR VK+ AP I+ FT +VA +SYD DMEVDGFE+++D+A Y K NYD+KLGNLMDYYGIKTEAEIL+G IM+MSKSFTKRRDAE+IG AVRALRKE + F + AKASAWYHVTYH YWG YN+G+NRDHFLSF WCVYD+LV IK KT++G Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTRLIITAAA--ERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQKKYDRAL--IDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLSPRSSTQR---RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYS--------------DPMRPGRRFIITGPVVVAKNPCLHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEEN---ESAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIK--KTNLG 1089
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT4G11130.1 (| RNA-dependent RNA polymerase 2 | Chr4:6780522-6784390 FORWARD LENGTH=1133 | 201606) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 451/1126 (40.05%), Postives = 660/1126 (58.61%), Query Frame = 0 Query: 4 TIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVG-RLYAIVQFTTKEAADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISN-KKFAVL--WRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKY--LLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPD-GIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTS-RSKPSSPAISL-DDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDI--TRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHH--MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD------AEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNQGMNRDHFLSFPWCVYDRLVEIKKD 1110 T+++ P + A+ + FLE G TV+AL++ T + R +A VQFTT E L+ ++ KL + L D +PRP ++ I L G S+ K+F L W GV + R++ F + G+ Y++E+ +E+I E C ++ L++L P++F++ ++S + F KE D W+RTTDF+ S IG ST C+E+ + D YY+E G ++ + +VP++ G+ PYEILF++N LV ++ L ++ L+ R +S+ L KL+ CY+P ++ Q + + + P+S L + ++ R VTPS++Y GPE+ +N V+++F + +F+R++F++ED K+ + LS + +RT IY R+LS L GI +G ++FEFLAFS+SQLR +S WMFAS + A +IREWMG FR+IR+++K AAR+GQ FS+S++TL V ++E IPD+++ Y FSDGIGK+S FA++VA KCGL + PSAFQIRYGGYKGV+A D +S +KLSLRDSM K++S L+V W++ PCFLNR++I LLSTLGI D +FE Q + L +L D A L+ +S + N+L ++L+ GY P +EP+LSMML+ S+L EL+++ RI +P GR ++GC+DE L YGQV+V+++ + S F + +V G VVV KNPCLHPGD+RVL A+ +DC++FPQKG RPHPNECSG DLDGD +FV WD+++IP + DPPMDY ++ +DHDV +E+I ++F +Y+++D+LG+I+ AH V ADR+P KARS+ CL+LA S AVDF KTG PAE+P L +E+PDF+E+ +KPTY S++V GKL+RAVK VA YD +E GFE I+ A H+ Y KL +LM YYG E EILTG I+K + + R + + I ++V+ L KEA WF EKS D E ASAWY+VTY+P N + FLSFPW V D L++IK + Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRAQLLSSQS-KLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWDGVRCWI--LTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKIS--LFAASDMELIKILRG-MSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLS-HVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKI-DEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWF-EKSCED-EQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1116
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT3G49500.5 (| RNA-dependent RNA polymerase 6 | Chr3:18349193-18353205 REVERSE LENGTH=1196 | 201606) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 424/1216 (34.87%), Postives = 634/1216 (52.14%), Query Frame = 0 Query: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRL----------------------YAIVQFTTKEAADTIISLACRTEKLWYGRSY-----------LNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWR--GVNVTVN-----FGFGMRKIN-------FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYES-PVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPP-----------DGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKY-MTSRSKPSSPAI----SLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLS-------PRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEI-IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDN-PPSAFQIRYGGYKGVVAADPTSSK--KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQL---HGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKE-----KSGSDTEDDAY--AKASAWYHVTYHPDYWGCYNQGMNRDH-----FLSFPWCVYDRLVEIK---KDKTSIGNAFPA 1120 + + GF TA+ + D+LE + G V+ +L+T G +A V F E+A + A + + G+ LN RR + TVP + + I L G +S F V WR GV+ V+ F RK + + + +Y+LEL +I + + + L++QL +PR++ + + D +Y++ P + P W+RTTDFT IG+ + + R E + Y++ R V E + + P G P +GI+ +EI+F +N ++ G L F+ L+ V+I+ ++H C Y+ R + D Y++ + +P + + + + R+ +TP+R Y PE+ +SNRVLR ++ + FLR++F+DE + I+S LS +S++ +T ++ R+ S L +G + RK+ FLAFS++QLR+ SAW FA ++I+ WMG F++ +NVAK AAR+G FSS+ T+ V E++ +PD++ + YVFSDGIG ++ + A +V K L + P A+QIRY G+KGVVA P+ S +L+LRDSM+K+ S+ T L++ +W+++QP FLNRQ+I+LLS LG+ DEIF Q + +L+ IL D A E L S E N +L G+KP EP L ML + R ++L LR K+RIF+ +GR +MGCLDE L +GQ F+Q+S HG S F +++ +V+G V +AKNPCLHPGDVR+L+AV+VP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP + P M Y A+ L V +DI ++F + N+ LG I NAH V ADR A E CL LAE + AVDFPKTG +P HL K YPDFM K D TY+S ++G+L+R VK++ + ++E S YD +E+ GFED I +A HK YD +L L+ Y ++ E EI+TG I M K +K++ E + + +L+KE R F+E ++ S+ E + KASAWYHVTYHP++ + + D LSF W D L IK ++ SI +A P Sbjct: 15 VSIGGFGESTTAKQLTDYLEDEVG--IVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRR--RTTVP------YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQY--KTLHGFVLILQLASSPRVWYRT--ADDDIYDTVPGDLLDDDDP---WIRTTDFTQVGAIGRCHSYRVLISPRYE-NKLRTALDYFRM---RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS--FEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYK--RPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLT-ASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHG--SRFKETKTDLE-VVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA--EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPV 1185
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT3G49500.4 (| RNA-dependent RNA polymerase 6 | Chr3:18349193-18353205 REVERSE LENGTH=1196 | 201606) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 424/1216 (34.87%), Postives = 634/1216 (52.14%), Query Frame = 0 Query: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRL----------------------YAIVQFTTKEAADTIISLACRTEKLWYGRSY-----------LNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWR--GVNVTVN-----FGFGMRKIN-------FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYES-PVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPP-----------DGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKY-MTSRSKPSSPAI----SLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLS-------PRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEI-IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDN-PPSAFQIRYGGYKGVVAADPTSSK--KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQL---HGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKE-----KSGSDTEDDAY--AKASAWYHVTYHPDYWGCYNQGMNRDH-----FLSFPWCVYDRLVEIK---KDKTSIGNAFPA 1120 + + GF TA+ + D+LE + G V+ +L+T G +A V F E+A + A + + G+ LN RR + TVP + + I L G +S F V WR GV+ V+ F RK + + + +Y+LEL +I + + + L++QL +PR++ + + D +Y++ P + P W+RTTDFT IG+ + + R E + Y++ R V E + + P G P +GI+ +EI+F +N ++ G L F+ L+ V+I+ ++H C Y+ R + D Y++ + +P + + + + R+ +TP+R Y PE+ +SNRVLR ++ + FLR++F+DE + I+S LS +S++ +T ++ R+ S L +G + RK+ FLAFS++QLR+ SAW FA ++I+ WMG F++ +NVAK AAR+G FSS+ T+ V E++ +PD++ + YVFSDGIG ++ + A +V K L + P A+QIRY G+KGVVA P+ S +L+LRDSM+K+ S+ T L++ +W+++QP FLNRQ+I+LLS LG+ DEIF Q + +L+ IL D A E L S E N +L G+KP EP L ML + R ++L LR K+RIF+ +GR +MGCLDE L +GQ F+Q+S HG S F +++ +V+G V +AKNPCLHPGDVR+L+AV+VP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP + P M Y A+ L V +DI ++F + N+ LG I NAH V ADR A E CL LAE + AVDFPKTG +P HL K YPDFM K D TY+S ++G+L+R VK++ + ++E S YD +E+ GFED I +A HK YD +L L+ Y ++ E EI+TG I M K +K++ E + + +L+KE R F+E ++ S+ E + KASAWYHVTYHP++ + + D LSF W D L IK ++ SI +A P Sbjct: 15 VSIGGFGESTTAKQLTDYLEDEVG--IVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRR--RTTVP------YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQY--KTLHGFVLILQLASSPRVWYRT--ADDDIYDTVPGDLLDDDDP---WIRTTDFTQVGAIGRCHSYRVLISPRYE-NKLRTALDYFRM---RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS--FEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYK--RPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLT-ASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHG--SRFKETKTDLE-VVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA--EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPV 1185
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT3G49500.3 (| RNA-dependent RNA polymerase 6 | Chr3:18349193-18353205 REVERSE LENGTH=1196 | 201606) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 424/1216 (34.87%), Postives = 634/1216 (52.14%), Query Frame = 0 Query: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRL----------------------YAIVQFTTKEAADTIISLACRTEKLWYGRSY-----------LNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWR--GVNVTVN-----FGFGMRKIN-------FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYES-PVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPP-----------DGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKY-MTSRSKPSSPAI----SLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLS-------PRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEI-IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDN-PPSAFQIRYGGYKGVVAADPTSSK--KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQL---HGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKE-----KSGSDTEDDAY--AKASAWYHVTYHPDYWGCYNQGMNRDH-----FLSFPWCVYDRLVEIK---KDKTSIGNAFPA 1120 + + GF TA+ + D+LE + G V+ +L+T G +A V F E+A + A + + G+ LN RR + TVP + + I L G +S F V WR GV+ V+ F RK + + + +Y+LEL +I + + + L++QL +PR++ + + D +Y++ P + P W+RTTDFT IG+ + + R E + Y++ R V E + + P G P +GI+ +EI+F +N ++ G L F+ L+ V+I+ ++H C Y+ R + D Y++ + +P + + + + R+ +TP+R Y PE+ +SNRVLR ++ + FLR++F+DE + I+S LS +S++ +T ++ R+ S L +G + RK+ FLAFS++QLR+ SAW FA ++I+ WMG F++ +NVAK AAR+G FSS+ T+ V E++ +PD++ + YVFSDGIG ++ + A +V K L + P A+QIRY G+KGVVA P+ S +L+LRDSM+K+ S+ T L++ +W+++QP FLNRQ+I+LLS LG+ DEIF Q + +L+ IL D A E L S E N +L G+KP EP L ML + R ++L LR K+RIF+ +GR +MGCLDE L +GQ F+Q+S HG S F +++ +V+G V +AKNPCLHPGDVR+L+AV+VP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP + P M Y A+ L V +DI ++F + N+ LG I NAH V ADR A E CL LAE + AVDFPKTG +P HL K YPDFM K D TY+S ++G+L+R VK++ + ++E S YD +E+ GFED I +A HK YD +L L+ Y ++ E EI+TG I M K +K++ E + + +L+KE R F+E ++ S+ E + KASAWYHVTYHP++ + + D LSF W D L IK ++ SI +A P Sbjct: 15 VSIGGFGESTTAKQLTDYLEDEVG--IVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRR--RTTVP------YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQY--KTLHGFVLILQLASSPRVWYRT--ADDDIYDTVPGDLLDDDDP---WIRTTDFTQVGAIGRCHSYRVLISPRYE-NKLRTALDYFRM---RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS--FEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYK--RPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLT-ASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHG--SRFKETKTDLE-VVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA--EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPV 1185
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT3G49500.2 (| RNA-dependent RNA polymerase 6 | Chr3:18349193-18353205 REVERSE LENGTH=1196 | 201606) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 424/1216 (34.87%), Postives = 634/1216 (52.14%), Query Frame = 0 Query: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRL----------------------YAIVQFTTKEAADTIISLACRTEKLWYGRSY-----------LNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWR--GVNVTVN-----FGFGMRKIN-------FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYES-PVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPP-----------DGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKY-MTSRSKPSSPAI----SLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLS-------PRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEI-IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDN-PPSAFQIRYGGYKGVVAADPTSSK--KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQL---HGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKE-----KSGSDTEDDAY--AKASAWYHVTYHPDYWGCYNQGMNRDH-----FLSFPWCVYDRLVEIK---KDKTSIGNAFPA 1120 + + GF TA+ + D+LE + G V+ +L+T G +A V F E+A + A + + G+ LN RR + TVP + + I L G +S F V WR GV+ V+ F RK + + + +Y+LEL +I + + + L++QL +PR++ + + D +Y++ P + P W+RTTDFT IG+ + + R E + Y++ R V E + + P G P +GI+ +EI+F +N ++ G L F+ L+ V+I+ ++H C Y+ R + D Y++ + +P + + + + R+ +TP+R Y PE+ +SNRVLR ++ + FLR++F+DE + I+S LS +S++ +T ++ R+ S L +G + RK+ FLAFS++QLR+ SAW FA ++I+ WMG F++ +NVAK AAR+G FSS+ T+ V E++ +PD++ + YVFSDGIG ++ + A +V K L + P A+QIRY G+KGVVA P+ S +L+LRDSM+K+ S+ T L++ +W+++QP FLNRQ+I+LLS LG+ DEIF Q + +L+ IL D A E L S E N +L G+KP EP L ML + R ++L LR K+RIF+ +GR +MGCLDE L +GQ F+Q+S HG S F +++ +V+G V +AKNPCLHPGDVR+L+AV+VP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP + P M Y A+ L V +DI ++F + N+ LG I NAH V ADR A E CL LAE + AVDFPKTG +P HL K YPDFM K D TY+S ++G+L+R VK++ + ++E S YD +E+ GFED I +A HK YD +L L+ Y ++ E EI+TG I M K +K++ E + + +L+KE R F+E ++ S+ E + KASAWYHVTYHP++ + + D LSF W D L IK ++ SI +A P Sbjct: 15 VSIGGFGESTTAKQLTDYLEDEVG--IVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRR--RTTVP------YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQY--KTLHGFVLILQLASSPRVWYRT--ADDDIYDTVPGDLLDDDDP---WIRTTDFTQVGAIGRCHSYRVLISPRYE-NKLRTALDYFRM---RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS--FEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYK--RPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLT-ASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHG--SRFKETKTDLE-VVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA--EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPV 1185
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT3G49500.1 (| RNA-dependent RNA polymerase 6 | Chr3:18349193-18353205 REVERSE LENGTH=1196 | 201606) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 424/1216 (34.87%), Postives = 634/1216 (52.14%), Query Frame = 0 Query: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRL----------------------YAIVQFTTKEAADTIISLACRTEKLWYGRSY-----------LNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNKKFAVLWR--GVNVTVN-----FGFGMRKIN-------FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYES-PVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPP-----------DGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKY-MTSRSKPSSPAI----SLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLS-------PRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEMEI-IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDN-PPSAFQIRYGGYKGVVAADPTSSK--KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQL---HGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQD--PPMDYTPAQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRS---YDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRD--AEAIGMAVRALRKEARAWFKE-----KSGSDTEDDAY--AKASAWYHVTYHPDYWGCYNQGMNRDH-----FLSFPWCVYDRLVEIK---KDKTSIGNAFPA 1120 + + GF TA+ + D+LE + G V+ +L+T G +A V F E+A + A + + G+ LN RR + TVP + + I L G +S F V WR GV+ V+ F RK + + + +Y+LEL +I + + + L++QL +PR++ + + D +Y++ P + P W+RTTDFT IG+ + + R E + Y++ R V E + + P G P +GI+ +EI+F +N ++ G L F+ L+ V+I+ ++H C Y+ R + D Y++ + +P + + + + R+ +TP+R Y PE+ +SNRVLR ++ + FLR++F+DE + I+S LS +S++ +T ++ R+ S L +G + RK+ FLAFS++QLR+ SAW FA ++I+ WMG F++ +NVAK AAR+G FSS+ T+ V E++ +PD++ + YVFSDGIG ++ + A +V K L + P A+QIRY G+KGVVA P+ S +L+LRDSM+K+ S+ T L++ +W+++QP FLNRQ+I+LLS LG+ DEIF Q + +L+ IL D A E L S E N +L G+KP EP L ML + R ++L LR K+RIF+ +GR +MGCLDE L +GQ F+Q+S HG S F +++ +V+G V +AKNPCLHPGDVR+L+AV+VP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP + P M Y A+ L V +DI ++F + N+ LG I NAH V ADR A E CL LAE + AVDFPKTG +P HL K YPDFM K D TY+S ++G+L+R VK++ + ++E S YD +E+ GFED I +A HK YD +L L+ Y ++ E EI+TG I M K +K++ E + + +L+KE R F+E ++ S+ E + KASAWYHVTYHP++ + + D LSF W D L IK ++ SI +A P Sbjct: 15 VSIGGFGESTTAKQLTDYLEDEVG--IVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRR--RTTVP------YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQY--KTLHGFVLILQLASSPRVWYRT--ADDDIYDTVPGDLLDDDDP---WIRTTDFTQVGAIGRCHSYRVLISPRYE-NKLRTALDYFRM---RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS--FEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYK--RPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLT-ASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHG--SRFKETKTDLE-VVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA--EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPV 1185
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT2G19930.3 (| RNA-dependent RNA polymerase family protein | Chr2:8607533-8612441 REVERSE LENGTH=971 | 201606) HSP 1 Score: 113.62 bits (283), Expect = 4.399e-25 Identity = 168/674 (24.93%), Postives = 271/674 (40.21%), Query Frame = 0 Query: 365 DDGLVYVHRVQVTPSRVY-FCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAF------------SSSQLR------ESSAWM-FASRYGLTAAEIREWMGNFREIR---NVAKYAARLGQSFSSSKETLSVHM-----DEMEII----PDVKIEIGKTKY--VFSDGIGKVSAEFARKV-----ASKC--------GLKDNPPSAFQIR--YGGY--KGVVAADPT-SSKKLSLRDSMRKYE--------SELTKLDVLAWSKY-QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVD----CVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIP--PQQDPPMDYTP---------AQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADR---------EPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVK 953 D G + ++ V P+ Y F GP + + L D DN L + F D + SS I Y I +NGI+IG R+++F F S+ +++ +S+A+ + Y LT I E +F + +A Y AR S +K TL V M D+++ I D K + K K + SDG G +S + AR KC +PP Q R Y GY KG + + + +R SM K S L+V+ S + L++ L++LLS GI +E F + + +I + A A ++ N + +L+ P EP L L ++ +L+ ++ + +MG +D T L +V V + Q+ GE V+V +NP LH GD+ +LKA V AL V V FPQKG R +E +G D DGD+YF+ + EL+ +P + TP + + + + ++ +GI A++ DR E + + L+L + + A+D PK G +P L +P +ME+ K ++S +++G +F VK Sbjct: 198 DSGKTHYYQCNVAPNGSYTFKGPLLEHTGTHLHKVLGD-DNVLTVKFADVQ-----------KSSSTYSIDHYFTYKGIA---KNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTK-TLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVG--IPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESG---QISGE------------------VLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVK 829
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT2G19930.2 (| RNA-dependent RNA polymerase family protein | Chr2:8607533-8612459 REVERSE LENGTH=977 | 201606) HSP 1 Score: 113.235 bits (282), Expect = 5.032e-25 Identity = 168/674 (24.93%), Postives = 271/674 (40.21%), Query Frame = 0 Query: 365 DDGLVYVHRVQVTPSRVY-FCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAF------------SSSQLR------ESSAWM-FASRYGLTAAEIREWMGNFREIR---NVAKYAARLGQSFSSSKETLSVHM-----DEMEII----PDVKIEIGKTKY--VFSDGIGKVSAEFARKV-----ASKC--------GLKDNPPSAFQIR--YGGY--KGVVAADPT-SSKKLSLRDSMRKYE--------SELTKLDVLAWSKY-QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVD----CVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIP--PQQDPPMDYTP---------AQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADR---------EPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVK 953 D G + ++ V P+ Y F GP + + L D DN L + F D + SS I Y I +NGI+IG R+++F F S+ +++ +S+A+ + Y LT I E +F + +A Y AR S +K TL V M D+++ I D K + K K + SDG G +S + AR KC +PP Q R Y GY KG + + + +R SM K S L+V+ S + L++ L++LLS GI +E F + + +I + A A ++ N + +L+ P EP L L ++ +L+ ++ + +MG +D T L +V V + Q+ GE V+V +NP LH GD+ +LKA V AL V V FPQKG R +E +G D DGD+YF+ + EL+ +P + TP + + + + ++ +GI A++ DR E + + L+L + + A+D PK G +P L +P +ME+ K ++S +++G +F VK Sbjct: 204 DSGKTHYYQCNVAPNGSYTFKGPLLEHTGTHLHKVLGD-DNVLTVKFADVQ-----------KSSSTYSIDHYFTYKGIA---KNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTK-TLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVG--IPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESG---QISGE------------------VLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVK 835
BLAST of CMJ_chr2_013260.4 vs. Araport11
Match: AT2G19930.1 (| RNA-dependent RNA polymerase family protein | Chr2:8607533-8612441 REVERSE LENGTH=977 | 201606) HSP 1 Score: 108.997 bits (271), Expect = 1.231e-23 Identity = 167/680 (24.56%), Postives = 270/680 (39.71%), Query Frame = 0 Query: 365 DDGLVYVHRVQVTPSRVY-------FCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAF------------SSSQLR------ESSAWM-FASRYGLTAAEIREWMGNFREIR---NVAKYAARLGQSFSSSKETLSVHM-----DEMEII----PDVKIEIGKTKY--VFSDGIGKVSAEFARKV-----ASKC--------GLKDNPPSAFQIR--YGGY--KGVVAADPT-SSKKLSLRDSMRKYE--------SELTKLDVLAWSKY-QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVD----CVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIP--PQQDPPMDYTP---------AQSMQLDHDVQIEDIEEYFTNYIVNDSLGIIANAHTVFADR---------EPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVK 953 D G + ++ V P+ Y GP + + L D DN L + F D + SS I Y I +NGI+IG R+++F F S+ +++ +S+A+ + Y LT I E +F + +A Y AR S +K TL V M D+++ I D K + K K + SDG G +S + AR KC +PP Q R Y GY KG + + + +R SM K S L+V+ S + L++ L++LLS GI +E F + + +I + A A ++ N + +L+ P EP L L ++ +L+ ++ + +MG +D T L +V V + Q+ GE V+V +NP LH GD+ +LKA V AL V V FPQKG R +E +G D DGD+YF+ + EL+ +P + TP + + + + ++ +GI A++ DR E + + L+L + + A+D PK G +P L +P +ME+ K ++S +++G +F VK Sbjct: 198 DSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGTHLHKVLGD-DNVLTVKFADVQ-----------KSSSTYSIDHYFTYKGIA---KNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTK-TLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVG--IPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESG---QISGE------------------VLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVK 835 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_013260.4 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_013260.4 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_013260.4 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_013260.4_cmj_v1 ID=CMJ_chr2_013260.4_cmj_v1; Name=CMJ_chr2_013260.4; organism=Citrus maxima; type=mRNA; length=3399bpback to top protein sequence of CMJ_chr2_013260.4_cmj_v1 >CMJ_chr2_013260.4_cmj_v1 ID=CMJ_chr2_013260.4_cmj_v1; Name=CMJ_chr2_013260.4_cmj_v1; organism=Citrus maxima; type=polypeptide; length=1133bpback to top mRNA from alignment at chr2:8815386..8822417+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=7032bp; location=Sequence derived from: chr2:8815386..8822417+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:8815386..8822417+ >CMJ_chr2_013260.4_cmj_v1 ID=CMJ_chr2_013260.4_cmj_v1; Name=CMJ_chr2_013260.4; organism=Citrus maxima; type=CDS; length=3399bp; location=Sequence derived from: chr2:8815386..8822417+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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