CMJ_chr2_013940.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A067F5Z0|A0A067F5Z0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033781mg PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.250e-65 Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
MLSGGALAFFMV TEFVLVSVTSA VQI VVKEAV ILVA+FYFHDEFTWL+GFGLFTILVGVSLFNWYKYQKLQAGH NEDGMLGS + NASAKYVILEEIDDLDEGT
Sbjct: 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT 111
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A067F556|A0A067F556_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033781mg PE=4 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.028e-56 Identity = 91/111 (81.98%), Postives = 94/111 (84.68%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
MLSGGALAFFMV TEFVLVSVTSA VQI V A+FYFHDEFTWL+GFGLFTILVGVSLFNWYKYQKLQAGH NEDGMLGS + NASAKYVILEEIDDLDEGT
Sbjct: 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT 102
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: V4UG55|V4UG55_CITCL (Receptor-like serine/threonine-protein kinase OS=Citrus clementina OX=85681 GN=CICLE_v10014464mg PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 5.680e-53 Identity = 91/105 (86.67%), Postives = 97/105 (92.38%), Query Frame = 0 Query: 7 LAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
L + +VLTEFVLVSVTSA VQI GVVKEAVTILVA+FYFHDEF+WL+GFGLFTILVGVSLFNWYKYQKLQAGH NEDGMLGS + NASAKYVILEEIDDLDEGT
Sbjct: 593 LHYNLVLTEFVLVSVTSAVTVQIAGVVKEAVTILVAVFYFHDEFSWLKGFGLFTILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDDLDEGT 697
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A2P2K8M3|A0A2P2K8M3_RHIMU (Phosphate translocator-related family protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.333e-50 Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
ML GG LAFFMVLTE+VLVSVTSA V I GVVKEAVTILVA+ YFHD FTWL+G GL TI+ GV LFNWYKYQKLQ G +EDG+ GSP N +AKYVILE++DD D T
Sbjct: 44 MLFGGTLAFFMVLTEYVLVSVTSAVTVTIAGVVKEAVTILVAVLYFHDHFTWLKGAGLITIMAGVGLFNWYKYQKLQKGQKSEDGLAGSPTTNVAAKYVILEDMDDQDHNT 154
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A2P2K8K5|A0A2P2K8K5_RHIMU (Phosphate translocator-related family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.820e-50 Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
ML GG LAFFMVLTE+VLVSVTSA V I GVVKEAVTILVA+ YFHD FTWL+G GL TI+ GV LFNWYKYQKLQ G +EDG+ GSP N +AKYVILE++DD D T
Sbjct: 75 MLFGGTLAFFMVLTEYVLVSVTSAVTVTIAGVVKEAVTILVAVLYFHDHFTWLKGAGLITIMAGVGLFNWYKYQKLQKGQKSEDGLAGSPTTNVAAKYVILEDMDDQDHNT 185
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A2I0K405|A0A2I0K405_PUNGR (TPT domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_016707 PE=4 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 9.268e-50 Identity = 80/111 (72.07%), Postives = 92/111 (82.88%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
ML GG LAFFMVLTE++LVSVTSA V I GVVKEAVTILVA+FYFHDEFTWL+G GL TI++GVSLFNWYKYQKL GH ED GS NA+AKYVILEE+++ ++GT
Sbjct: 44 MLLGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLLTIMIGVSLFNWYKYQKLHEGHSCEDEGEGSIARNAAAKYVILEEMEEQEDGT 154
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A2P2K8Q5|A0A2P2K8Q5_RHIMU (Putative sugar phosphate/phosphate translocator At1g06470 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.250e-49 Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
ML GG LAFFMVLTE+VLVSVTSA V I GVVKEAVTILVA+ YFHD FTWL+G GL TI+ GV LFNWYKYQKLQ G +EDG+ GSP N +AKYVILE++DD D T
Sbjct: 130 MLFGGTLAFFMVLTEYVLVSVTSAVTVTIAGVVKEAVTILVAVLYFHDHFTWLKGAGLITIMAGVGLFNWYKYQKLQKGQKSEDGLAGSPTTNVAAKYVILEDMDDQDHNT 240
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A7J7BVZ5|A0A7J7BVZ5_TRIWF (Sugar phosphate/phosphate translocator OS=Tripterygium wilfordii OX=458696 GN=HS088_TW23G00526 PE=4 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.271e-49 Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
ML GG+LAFFMVLTE++LVS+TSA V I GVVKEAVTILVA+FYFHD+FTWL+GFGLF I+VGVSLFNWYKYQKLQ G +ED M+ SP N +AKYVILEE+DD + G+
Sbjct: 294 MLFGGSLAFFMVLTEYILVSITSAVTVTIAGVVKEAVTILVAVFYFHDKFTWLKGFGLFIIMVGVSLFNWYKYQKLQNGQTSEDDMVVSPSTNMAAKYVILEEMDDQENGS 404
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A5B6ZF63|A0A5B6ZF63_DAVIN (TPT domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_012056 PE=4 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 5.628e-49 Identity = 85/110 (77.27%), Postives = 94/110 (85.45%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEG 110
ML GG LAFFMVLTE++LVSVTSA V I GVVKEAVTILVA+FYFHD+FTWL+G GLFTI+VGVSLFNWYKYQK Q G NED M GSP NA+AKYVILEE+DD D+G
Sbjct: 395 MLLGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVFYFHDQFTWLKGAGLFTIMVGVSLFNWYKYQKFQKGETNED-MSGSPTTNAAAKYVILEEMDDQDDG 503
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Match: A0A5C7HFX1|A0A5C7HFX1_9ROSI (TPT domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_020985 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.789e-49 Identity = 87/111 (78.38%), Postives = 94/111 (84.68%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEEIDDLDEGT 111
ML GG LAFFMVLTE+VLVSVTSA + I GVVKEAVTILVA+FYFHDEFTWL+GFGL TI+VGVSLFNWYKY+KLQ GH D + GSP AN AKYVILEEIDD DEGT
Sbjct: 449 MLFGGTLAFFMVLTEYVLVSVTSAVTITIAGVVKEAVTILVAVFYFHDEFTWLKGFGLITIMVGVSLFNWYKYEKLQKGH--TDHISGSPTANNIAKYVILEEIDDQDEGT 557
BLAST of CMJ_chr2_013940.1 vs. ExPASy Swiss-Prot
Match: PT106_ARATH (Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana OX=3702 GN=At1g06470 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.684e-42 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPN-EDGMLGSPDANASAKYVILEEIDD 106
ML GGALAF MVLTE+VLVSVTSA V I GVVKEAVTI+VA+FYFHDEFTWL+G GL I+VGVSLFNWYKY KLQ GH E+ L +P + + KYVIL+E+DD
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP--SQTGKYVILDEMDD 409
BLAST of CMJ_chr2_013940.1 vs. ExPASy Swiss-Prot
Match: YDB1_SCHPO (Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC22E12.01 PE=3 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 3.522e-10 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPNEDGMLGSPDANASAKYVILEE 103
+L G LAFFMV +EF L+ TS + + G++KE +TI+ + ++HD + GL L G+ ++N+Y+ K G+ E A +Y++L E
Sbjct: 281 ILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVITLCGIGVYNYYRITK---GNKKE--------AEKEVEYIVLNE 372
BLAST of CMJ_chr2_013940.1 vs. Araport11
Match: AT1G06470.4 (| Nucleotide/sugar transporter family protein | Chr1:1970726-1973540 FORWARD LENGTH=414 | 201606) HSP 1 Score: 146.362 bits (368), Expect = 2.746e-43 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPN-EDGMLGSPDANASAKYVILEEIDD 106
ML GGALAF MVLTE+VLVSVTSA V I GVVKEAVTI+VA+FYFHDEFTWL+G GL I+VGVSLFNWYKY KLQ GH E+ L +P + + KYVIL+E+DD
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP--SQTGKYVILDEMDD 409
BLAST of CMJ_chr2_013940.1 vs. Araport11
Match: AT1G06470.3 (| Nucleotide/sugar transporter family protein | Chr1:1970726-1973540 FORWARD LENGTH=414 | 201606) HSP 1 Score: 146.362 bits (368), Expect = 2.746e-43 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPN-EDGMLGSPDANASAKYVILEEIDD 106
ML GGALAF MVLTE+VLVSVTSA V I GVVKEAVTI+VA+FYFHDEFTWL+G GL I+VGVSLFNWYKY KLQ GH E+ L +P + + KYVIL+E+DD
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP--SQTGKYVILDEMDD 409
BLAST of CMJ_chr2_013940.1 vs. Araport11
Match: AT1G06470.2 (| Nucleotide/sugar transporter family protein | Chr1:1970726-1973540 FORWARD LENGTH=414 | 201606) HSP 1 Score: 146.362 bits (368), Expect = 2.746e-43 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPN-EDGMLGSPDANASAKYVILEEIDD 106
ML GGALAF MVLTE+VLVSVTSA V I GVVKEAVTI+VA+FYFHDEFTWL+G GL I+VGVSLFNWYKY KLQ GH E+ L +P + + KYVIL+E+DD
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP--SQTGKYVILDEMDD 409
BLAST of CMJ_chr2_013940.1 vs. Araport11
Match: AT1G06470.1 (| Nucleotide/sugar transporter family protein | Chr1:1970726-1973540 FORWARD LENGTH=414 | 201606) HSP 1 Score: 146.362 bits (368), Expect = 2.746e-43 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 1 MLSGGALAFFMVLTEFVLVSVTSAANVQIEGVVKEAVTILVAIFYFHDEFTWLRGFGLFTILVGVSLFNWYKYQKLQAGHPN-EDGMLGSPDANASAKYVILEEIDD 106
ML GGALAF MVLTE+VLVSVTSA V I GVVKEAVTI+VA+FYFHDEFTWL+G GL I+VGVSLFNWYKY KLQ GH E+ L +P + + KYVIL+E+DD
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAP--SQTGKYVILDEMDD 409 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_013940.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_013940.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_013940.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_013940.1_cmj_v1 ID=CMJ_chr2_013940.1_cmj_v1; Name=CMJ_chr2_013940.1; organism=Citrus maxima; type=mRNA; length=336bpback to top protein sequence of CMJ_chr2_013940.1_cmj_v1 >CMJ_chr2_013940.1_cmj_v1 ID=CMJ_chr2_013940.1_cmj_v1; Name=CMJ_chr2_013940.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=112bpback to top mRNA from alignment at chr2:9525093..9528274- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3182bp; location=Sequence derived from: chr2:9525093..9528274- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:9525093..9528274- >CMJ_chr2_013940.1_cmj_v1 ID=CMJ_chr2_013940.1_cmj_v1; Name=CMJ_chr2_013940.1; organism=Citrus maxima; type=CDS; length=336bp; location=Sequence derived from: chr2:9525093..9528274- (Citrus maximaback to top |