CMJ_chr2_015100.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A2H5PUX7|A0A2H5PUX7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_169880 PE=4 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 2.175e-112 Identity = 175/194 (90.21%), Postives = 175/194 (90.21%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTET AFAQEIFARVPRKES S KTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK
Sbjct: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESES-----------------KTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 177
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A067E778|A0A067E778_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g035699mg PE=4 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 7.169e-110 Identity = 175/194 (90.21%), Postives = 175/194 (90.21%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTET AFAQEIFARVPRKES S KTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK
Sbjct: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESES-----------------KTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 177
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A067EL20|A0A067EL20_CITSI (PWI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g024716mg PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.086e-70 Identity = 132/207 (63.77%), Postives = 157/207 (75.85%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRIT------------ASTNKKRFRKRIG-SEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M S+ NLKTWVSDKL+SL+G+SQP VVQYVIGLSKQA+S+AD++TKL+EF SS+TET FAQE+FARVPRK +G NLYQKQE AALLVK QKT TILDA D+ I ++ KKRFRK+ G +DDDDEGIA VE+ERR V+RR + + DDGSDSEEERLRDQR KE+LE+ +R+RD AATRKLT PK
Sbjct: 1 MGSDHNLKTWVSDKLMSLVGFSQPTVVQYVIGLSKQAVSAADVQTKLEEFGCSSSTETRTFAQELFARVPRKAAGLNLYQKQEREAALLVKKQKTYTILDADDDADDNGGTAIVDDRPSVASESRKSTKEKKRFRKKTGVEDDDDDEGIAHVEQERRQVKRRTSK-DIDDGSDSEEERLRDQREKEQLEQHLRDRDAAATRKLTEPK 206
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A067EHE4|A0A067EHE4_CITSI (PWI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g024716mg PE=4 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 9.058e-70 Identity = 132/207 (63.77%), Postives = 157/207 (75.85%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRIT------------ASTNKKRFRKRIG-SEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M S+ NLKTWVSDKL+SL+G+SQP VVQYVIGLSKQA+S+AD++TKL+EF SS+TET FAQE+FARVPRK +G NLYQKQE AALLVK QKT TILDA D+ I ++ KKRFRK+ G +DDDDEGIA VE+ERR V+RR + + DDGSDSEEERLRDQR KE+LE+ +R+RD AATRKLT PK
Sbjct: 1 MGSDHNLKTWVSDKLMSLVGFSQPTVVQYVIGLSKQAVSAADVQTKLEEFGCSSSTETRTFAQELFARVPRKAAGLNLYQKQEREAALLVKKQKTYTILDADDDADDNGGTAIVDDRPSVASESRKSTKEKKRFRKKTGVEDDDDDEGIAHVEQERRQVKRRTSK-DIDDGSDSEEERLRDQREKEQLEQHLRDRDAAATRKLTEPK 206
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A5H2Y2B8|A0A5H2Y2B8_PRUDU (Helicase domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_538S000100 PE=4 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 7.334e-66 Identity = 119/208 (57.21%), Postives = 150/208 (72.12%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTIL------------DAAHYDADDDVIRIT--ASTNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M SE NL TWVSDKL++LLGYSQP VVQY+IGL+KQA S AD+ KL EF SS+ ET AFA++IFARVPRKESG NLYQKQE AA+LVK QKT ++L +AH VI + A ++KKRFRK++ S++D+D+ + + E + R V+RR ++DDGS+SEEERLRDQR +E+LE+ IRERD AATRKLT K
Sbjct: 1 MGSESNLNTWVSDKLMTLLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDEDDNDGDTSSAH------VISKSRKADSHKKRFRKKVLSQEDEDDEVIAQEGQVRRVKRRTCSPDDDDGSESEEERLRDQREREQLEQNIRERDTAATRKLTDRK 202
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A314U7K2|A0A314U7K2_PRUYE (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_36846 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 6.304e-62 Identity = 128/199 (64.32%), Postives = 150/199 (75.38%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDAD----DDVIRITASTNKKRFRKRIGS-EDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M SE NLKTWVSDKL++ LGYSQP VVQY+IGL+KQA S AD+ KL EF SS+ ET AFA++IFARVPRKESG NLYQKQE AA+LVK QKT ++LDA D D A ++KKRFRK++ S ED+DDE IA EEERRV RR P ++DDGS+SEEERLRDQR +E+LE+ IRERD AATRKLT K
Sbjct: 1 MGSESNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDQDDDDGDRSSAQSRKADSHKKRFRKKVLSQEDEDDEVIAQEEEERRVKRRISP--DDDDGSESEEERLRDQREREQLEQNIRERDTAATRKLTDRK 197
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A314UDD7|A0A314UDD7_PRUYE (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_03512 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.675e-60 Identity = 128/199 (64.32%), Postives = 150/199 (75.38%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDAD----DDVIRITASTNKKRFRKRIGS-EDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M SE NLKTWVSDKL++ LGYSQP VVQY+IGL+KQA S AD+ KL EF SS+ ET AFA++IFARVPRKESG NLYQKQE AA+LVK QKT ++LDA D D A ++KKRFRK++ S ED+DDE IA EEERRV RR P ++DDGS+SEEERLRDQR +E+LE+ IRERD AATRKLT K
Sbjct: 1 MGSESNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDQDDDDGDRSSAQSRKADSHKKRFRKKVLSQEDEDDEVIAQEEEERRVKRRISP--DDDDGSESEEERLRDQREREQLEQNIRERDTAATRKLTDRK 197
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A5E4G5K7|A0A5E4G5K7_PRUDU (PREDICTED: pre-mRNA-splicing factor ATP-dependent OS=Prunus dulcis OX=3755 GN=ALMOND_2B013609 PE=4 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.703e-60 Identity = 126/200 (63.00%), Postives = 153/200 (76.50%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDV---IRIT-----ASTNKKRFRKRIGS-EDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLT 193
M SE NLKTWVSDKL++ LGYSQP VVQY+IGL+KQA S AD+ KL EF SS+ ET AFA++IFARVPRKESG NLYQKQE AA+LVK QKT ++LDA D DD +++ A ++KKRFRK++ S ED+DDE IA +EERRV RR P +++DGS+SEEERLRDQR +E+LE+ IRERD AATRKLT
Sbjct: 1 MGSESNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDQDDDDGDRSSVQVVSESRKADSHKKRFRKKVLSQEDEDDEVIAQEKEERRVKRRISP--DDNDGSESEEERLRDQREREQLEQNIRERDTAATRKLT 198
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: A0A251PB67|A0A251PB67_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G201700 PE=4 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.755e-60 Identity = 126/200 (63.00%), Postives = 153/200 (76.50%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDV---IRIT-----ASTNKKRFRKRIGS-EDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLT 193
M SE NLKTWVSDKL++ LGYSQP VVQY+IGL+KQA S AD+ KL EF SS+ ET AFA++IFARVPRKESG NLYQKQE AA+LVK QKT ++LDA D DD +++ A ++KKRFRK++ S ED+DDE IA +EERRV RR P +++DGS+SEEERLRDQR +E+LE+ IRERD AATRKLT
Sbjct: 1 MGSESNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDQDDDDGDRSSVQVVSESRKADSHKKRFRKKVLSQEDEDDEVIAQEKEERRVKRRISP--DDNDGSESEEERLRDQREREQLEQNIRERDTAATRKLT 198
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Match: M5WS09|M5WS09_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa000714mg PE=4 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.897e-60 Identity = 126/200 (63.00%), Postives = 153/200 (76.50%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDV---IRIT-----ASTNKKRFRKRIGS-EDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLT 193
M SE NLKTWVSDKL++ LGYSQP VVQY+IGL+KQA S AD+ KL EF SS+ ET AFA++IFARVPRKESG NLYQKQE AA+LVK QKT ++LDA D DD +++ A ++KKRFRK++ S ED+DDE IA +EERRV RR P +++DGS+SEEERLRDQR +E+LE+ IRERD AATRKLT
Sbjct: 1 MGSESNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDQDDDDGDRSSVQVVSESRKADSHKKRFRKKVLSQEDEDDEVIAQEKEERRVKRRISP--DDNDGSESEEERLRDQREREQLEQNIRERDTAATRKLT 198
BLAST of CMJ_chr2_015100.1 vs. ExPASy Swiss-Prot
Match: DEAH6_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.184e-54 Identity = 106/200 (53.00%), Postives = 145/200 (72.50%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITAS------TNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M S D L TWVSDKL+ LLG+SQ AVVQY+I ++KQ+ S +L +L E FS + +T AFA+EI+AR PRK G NLYQ+QE AA+L+K QKT ++L+A H + +++V + +AS +KRFRK+ +DDD+ + V E++R VRR++ E+EDDG++SEEERLRDQR +EELE+ +RERD A TRKLT PK
Sbjct: 1 MGSND-LNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECGFSLSGDTRAFAEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNVKKQSASKTGKSDKGQKRFRKKSEQLEDDDDEVVIVREDKRNVRRKV-SEDEDDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPK 198
BLAST of CMJ_chr2_015100.1 vs. ExPASy Swiss-Prot
Match: ESP3_ARATH (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.406e-39 Identity = 99/196 (50.51%), Postives = 139/196 (70.92%), Query Frame = 0 Query: 5 SEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITAST-------NKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLT 193
+ ++LKTWVSDKL+ LLGYSQ AVV Y+I ++K+ S +L +L ++ FSS+ +T +FA+EIFARVPRK +G NLYQK E AA+LV+ QKT +LDA + + V + ++ + KKRFRK+ G D+ D G +V E+ R VRR++ EEDDGS+SEEER+RDQ+ +EELE+ +++RD A TRKLT
Sbjct: 2 ASNDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSFAEEIFARVPRKTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKSDKGKKRFRKKSGQSDESD-GEVAVREDSRHVRRKV--SEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLT 194
BLAST of CMJ_chr2_015100.1 vs. Araport11
Match: AT2G35340.1 (| helicase domain-containing protein | Chr2:14872728-14879615 FORWARD LENGTH=1044 | 201606) HSP 1 Score: 188.734 bits (478), Expect = 4.280e-55 Identity = 106/200 (53.00%), Postives = 145/200 (72.50%), Query Frame = 0 Query: 3 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITAS------TNKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
M S D L TWVSDKL+ LLG+SQ AVVQY+I ++KQ+ S +L +L E FS + +T AFA+EI+AR PRK G NLYQ+QE AA+L+K QKT ++L+A H + +++V + +AS +KRFRK+ +DDD+ + V E++R VRR++ E+EDDG++SEEERLRDQR +EELE+ +RERD A TRKLT PK
Sbjct: 1 MGSND-LNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECGFSLSGDTRAFAEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNVKKQSASKTGKSDKGQKRFRKKSEQLEDDDDEVVIVREDKRNVRRKV-SEDEDDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPK 198
BLAST of CMJ_chr2_015100.1 vs. Araport11
Match: AT1G32490.1 (| RNA helicase family protein | Chr1:11742356-11749286 REVERSE LENGTH=1044 | 201606) HSP 1 Score: 145.976 bits (367), Expect = 3.485e-40 Identity = 99/196 (50.51%), Postives = 139/196 (70.92%), Query Frame = 0 Query: 5 SEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITAST-------NKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLT 193
+ ++LKTWVSDKL+ LLGYSQ AVV Y+I ++K+ S +L +L ++ FSS+ +T +FA+EIFARVPRK +G NLYQK E AA+LV+ QKT +LDA + + V + ++ + KKRFRK+ G D+ D G +V E+ R VRR++ EEDDGS+SEEER+RDQ+ +EELE+ +++RD A TRKLT
Sbjct: 2 ASNDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSFAEEIFARVPRKTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKSDKGKKRFRKKSGQSDESD-GEVAVREDSRHVRRKV--SEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLT 194
BLAST of CMJ_chr2_015100.1 vs. Araport11
Match: AT1G32490.2 (| RNA helicase family protein | Chr1:11742356-11749286 REVERSE LENGTH=1034 | 201606) HSP 1 Score: 145.976 bits (367), Expect = 3.651e-40 Identity = 99/196 (50.51%), Postives = 139/196 (70.92%), Query Frame = 0 Query: 5 SEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETLAFAQEIFARVPRKESGSNLYQKQETGAALLVKNQKTNTILDAAHYDADDDVIRITAST-------NKKRFRKRIGSEDDDDEGIASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLT 193
+ ++LKTWVSDKL+ LLGYSQ AVV Y+I ++K+ S +L +L ++ FSS+ +T +FA+EIFARVPRK +G NLYQK E AA+LV+ QKT +LDA + + V + ++ + KKRFRK+ G D+ D G +V E+ R VRR++ EEDDGS+SEEER+RDQ+ +EELE+ +++RD A TRKLT
Sbjct: 2 ASNDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSFAEEIFARVPRKTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKSDKGKKRFRKKSGQSDESD-GEVAVREDSRHVRRKV--SEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLT 194
BLAST of CMJ_chr2_015100.1 vs. Araport11
Match: AT2G35340.2 (| helicase domain-containing protein | Chr2:14873465-14879615 FORWARD LENGTH=906 | 201606) HSP 1 Score: 70.4774 bits (171), Expect = 4.606e-14 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 0 Query: 138 IASVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPK 196
+ V E++R VRR++ E+EDDG++SEEERLRDQR +EELE+ +RERD A TRKLT PK
Sbjct: 3 VVIVREDKRNVRRKV-SEDEDDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPK 60 The following BLAST results are available for this feature:
BLAST of CMJ_chr2_015100.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_015100.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of CMJ_chr2_015100.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr2_015100.1_cmj_v1 ID=CMJ_chr2_015100.1_cmj_v1; Name=CMJ_chr2_015100.1; organism=Citrus maxima; type=mRNA; length=618bpback to top protein sequence of CMJ_chr2_015100.1_cmj_v1 >CMJ_chr2_015100.1_cmj_v1 ID=CMJ_chr2_015100.1_cmj_v1; Name=CMJ_chr2_015100.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=206bpback to top mRNA from alignment at chr2:10429450..10430231- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=782bp; location=Sequence derived from: chr2:10429450..10430231- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr2:10429450..10430231- >CMJ_chr2_015100.1_cmj_v1 ID=CMJ_chr2_015100.1_cmj_v1; Name=CMJ_chr2_015100.1; organism=Citrus maxima; type=CDS; length=618bp; location=Sequence derived from: chr2:10429450..10430231- (Citrus maximaback to top |