CMJ_chr3_008770.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_008770.1 vs. ExPASy TrEMBL
Match: A0A2H5MWB0|A0A2H5MWB0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_280840 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.783e-24 Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 1 MEKTYQLKLACLVVLLLVASSGLSKACEHDEDCKDICEGFKGCCNTKEGTCVCEGGKFAEKFSPGHHSK 69 MEK YQL+LACLVVLL VASSGLSKAC D DC D CE KG C+ +EG C C GGKFAEKF+PGHHSK Sbjct: 1 MEKIYQLRLACLVVLLFVASSGLSKACVDDADCADQCEFGKGHCD-REGHCECPGGKFAEKFAPGHHSK 68
BLAST of CMJ_chr3_008770.1 vs. ExPASy TrEMBL
Match: A0A067DID2|A0A067DID2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036481mg PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.783e-24 Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 1 MEKTYQLKLACLVVLLLVASSGLSKACEHDEDCKDICEGFKGCCNTKEGTCVCEGGKFAEKFSPGHHSK 69 MEK YQL+LACLVVLL VASSGLSKAC D DC D CE KG C+ +EG C C GGKFAEKF+PGHHSK Sbjct: 1 MEKIYQLRLACLVVLLFVASSGLSKACVDDADCADQCEFGKGHCD-REGHCECPGGKFAEKFAPGHHSK 68
BLAST of CMJ_chr3_008770.1 vs. ExPASy TrEMBL
Match: A0A2H5QIE7|A0A2H5QIE7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_233250 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.883e-24 Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 1 MEKTYQLKLACLVVLLLVASSGLSKACEHDEDCKDICEGFKGCCNTKEGTCVCEGGKFAEKFSPGHHSK 69 MEK YQL+LACLVVLL VASSGLSKAC D DC D CE KG C++ EG C C GGKFAEKF+PGHHSK Sbjct: 1 MEKIYQLRLACLVVLLFVASSGLSKACVDDADCADQCEFGKGRCDS-EGHCECPGGKFAEKFAPGHHSK 68 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_008770.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_008770.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_008770.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_008770.1_cmj_v1 ID=CMJ_chr3_008770.1_cmj_v1; Name=CMJ_chr3_008770.1; organism=Citrus maxima; type=mRNA; length=222bpback to top protein sequence of CMJ_chr3_008770.1_cmj_v1 >CMJ_chr3_008770.1_cmj_v1 ID=CMJ_chr3_008770.1_cmj_v1; Name=CMJ_chr3_008770.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=74bpback to top mRNA from alignment at chr3:24502481..24502903+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=423bp; location=Sequence derived from: chr3:24502481..24502903+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:24502481..24502903+ >CMJ_chr3_008770.1_cmj_v1 ID=CMJ_chr3_008770.1_cmj_v1; Name=CMJ_chr3_008770.1; organism=Citrus maxima; type=CDS; length=222bp; location=Sequence derived from: chr3:24502481..24502903+ (Citrus maximaback to top |