CMJ_chr3_009300.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: A0A067DFU1|A0A067DFU1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044384mg PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.562e-55 Identity = 92/119 (77.31%), Postives = 100/119 (84.03%), Query Frame = 0 Query: 6 GKIETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
GK+ IEK LQVM KLEELIEEINSREDEKI CF+ADGNMGWS+EV KKMNV G VFW SSAASVA+VFR+PKLIDDGII SHG P SMQMF IAPNMPEMNSRDCFWA I + ++
Sbjct: 79 GKL--IEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: A0A067F6K4|A0A067F6K4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g009851mg PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.767e-55 Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 0 Query: 9 ETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
+ IEK LQVM GKLEELIEEINSREDEKI CF+ADGN+GWSME+ KKMNV G VFWPSSAASVA+VFR+PKLIDDGII SHG P SMQMFRIAP MPEMNSRDCFWA I +++
Sbjct: 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: A0A2H5N9H5|A0A2H5N9H5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_280070 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.046e-55 Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 0 Query: 9 ETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
+ IEK LQVM GKLEELIEEINSREDEKI CF+ADGN+GWSME+ KKMNV G VFWPSSAASVA+VFR+PKLIDDGII SHG P SMQMFRIAP MPEMNSRDCFWA I +++
Sbjct: 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: V4T8J3|V4T8J3_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001071mg PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.145e-55 Identity = 91/114 (79.82%), Postives = 97/114 (85.09%), Query Frame = 0 Query: 11 IEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
IEK LQVM GKLE+LIEEINSREDEKI CF+ADGN GWSMEV KKMNV G VFWPSSAASVA VFR+PKLIDDGII SHG P SMQMFRIAP MPEMNSRDCFWA I + ++
Sbjct: 82 IEKCLQVMPGKLEKLIEEINSREDEKIDCFIADGNTGWSMEVAKKMNVRGAVFWPSSAASVAFVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDLTTQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: A0A2H5MYF2|A0A2H5MYF2_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_281590 PE=4 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.812e-54 Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 0 Query: 6 GKIETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAERKHEVLSDDE 133
GK+ IEKVLQVM GKLEELIEEINSREDEK+ CF+ADG M WSMEV KKMNV G +FWPSSAASVA++F +PKLIDDGII SHG P S QMFRIAPNMPEMN+ DCFW + + ER L+D +
Sbjct: 79 GKL--IEKVLQVMPGKLEELIEEINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSHGTPMSKQMFRIAPNMPEMNAGDCFWTDMGDLTTERILFDLADKD 204
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: V4SE34|V4SE34_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000944mg PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 8.973e-52 Identity = 87/116 (75.00%), Postives = 96/116 (82.76%), Query Frame = 0 Query: 9 ETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
+ IE LQVM GKLE+LIEEINSREDEKI CF+ADGNMGWS+EV KKMNV G VFW SSAA VA+VF +PKLIDDGII SHG P SMQMFRIAP MPEMNSRDCFWA I + ++
Sbjct: 80 KLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGAVFWSSSAALVALVFCIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDLTTQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: A0A2H5QFP7|A0A2H5QFP7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_225770 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 3.696e-51 Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0 Query: 9 ETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
+ EKVLQVM GKLEELIE+INSREDEK+ CF+ADG M WSMEV KKMNV G +FWPSSAASVA++F +PKLIDDGII S+G P S QMFRIAPNMPEMNS DCFW I + ++
Sbjct: 80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSNGTPMSKQMFRIAPNMPEMNSGDCFWTNIGDLNTQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: A0A2H5N098|A0A2H5N098_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_281590 PE=4 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.385e-50 Identity = 84/113 (74.34%), Postives = 93/113 (82.30%), Query Frame = 0 Query: 12 EKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
EKVLQVM GKL ELIEEINSREDEK+ CF+ADG M WSMEV KKMNV G +FWPSSAASVA++F +PKLIDDGII SHG P S QMFRIAPNMPEMN+ DCFW + + ER
Sbjct: 268 EKVLQVMPGKLAELIEEINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSHGTPMSKQMFRIAPNMPEMNAGDCFWTDMGDLTTER 380 HSP 2 Score: 131.339 bits (329), Expect = 1.346e-32 Identity = 64/79 (81.01%), Postives = 70/79 (88.61%), Query Frame = 0 Query: 11 IEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSH 89
IEKVLQVM GKLEELIEEINSREDEK+ CF+ADG M WSMEV KKMNV G +FWPSSAASVA++F +PKLIDDGII SH
Sbjct: 82 IEKVLQVMPGKLEELIEEINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSH 160
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: V4SE40|V4SE40_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001095mg PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.568e-49 Identity = 85/122 (69.67%), Postives = 96/122 (78.69%), Query Frame = 0 Query: 12 EKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAERKHEVLSDDE 133
EK LQVM GKL ELIEEINSREDEK+ CF+ADG M WSMEV KKMNV G +FWPSSAASVA++F +PKLIDDGII SHG P S QMFRIAPNMPEMN+ DCFW + + ER L+D +
Sbjct: 83 EKFLQVMPGKLAELIEEINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSHGTPMSKQMFRIAPNMPEMNAGDCFWTDMGDLTTERILFDLADKD 204
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Match: V4T3A9|V4T3A9_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000928mg PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 3.096e-49 Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0 Query: 9 ETIEKVLQVMLGKLEELIEEINSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWAQIAAVAAER 124
+ EKVLQVM GKLEELIE+INSREDEK+ CF+ADG M WSMEV KKMNV G +FWPSSAASVA++F +PKLIDDGII S+G P S QMFRIAPNMPEMNS DCFW I + ++
Sbjct: 80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSNGTPMSKQMFRIAPNMPEMNSGDCFWTNIGDLNTQK 195
BLAST of CMJ_chr3_009300.1 vs. ExPASy Swiss-Prot
Match: U83A1_ARATH (UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana OX=3702 GN=UGT83A1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.708e-15 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 5 PGKIETIEKVLQVMLGKLEELIEEI--NSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWA 115
PGK+ E VL+ M K+EELIE + + I C +AD ++GW++EV K + F P++AAS+ + F + KLIDDG+I S G + +++P MP+M + W
Sbjct: 90 PGKLS--ESVLRFMPKKVEELIERMMAETSGGTIISCVVADQSLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNKTIQLSPGMPKMETDKFVWV 200
BLAST of CMJ_chr3_009300.1 vs. Araport11
Match: AT3G02100.1 (| UDP-Glycosyltransferase superfamily protein | Chr3:368840-370484 REVERSE LENGTH=464 | 201606) HSP 1 Score: 76.6406 bits (187), Expect = 2.771e-16 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 5 PGKIETIEKVLQVMLGKLEELIEEI--NSREDEKIVCFLADGNMGWSMEVGKKMNVWGVVFWPSSAASVAVVFRLPKLIDDGIIHSHGNPTSMQMFRIAPNMPEMNSRDCFWA 115
PGK+ E VL+ M K+EELIE + + I C +AD ++GW++EV K + F P++AAS+ + F + KLIDDG+I S G + +++P MP+M + W
Sbjct: 90 PGKLS--ESVLRFMPKKVEELIERMMAETSGGTIISCVVADQSLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNKTIQLSPGMPKMETDKFVWV 200 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_009300.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_009300.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_009300.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_009300.1_cmj_v1 ID=CMJ_chr3_009300.1_cmj_v1; Name=CMJ_chr3_009300.1; organism=Citrus maxima; type=mRNA; length=597bpback to top protein sequence of CMJ_chr3_009300.1_cmj_v1 >CMJ_chr3_009300.1_cmj_v1 ID=CMJ_chr3_009300.1_cmj_v1; Name=CMJ_chr3_009300.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=199bpback to top mRNA from alignment at chr3:25201434..25203671- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2238bp; location=Sequence derived from: chr3:25201434..25203671- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:25201434..25203671- >CMJ_chr3_009300.1_cmj_v1 ID=CMJ_chr3_009300.1_cmj_v1; Name=CMJ_chr3_009300.1; organism=Citrus maxima; type=CDS; length=597bp; location=Sequence derived from: chr3:25201434..25203671- (Citrus maximaback to top |