CMJ_chr3_009580.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: V4T8L6|V4T8L6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003287mg PE=4 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 2.709e-64 Identity = 117/170 (68.82%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 1 MERRRTNVA--PASQQEVSISIPDGDAANSVQPLQNGLLEANIVHSTSSSSSIQTPDINSNSTQAPDSDTNQGGTSSQFNLPSLHLLQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
MERRRTNVA PASQQEVSISIP GDAANSVQPLQN S P + L+GDCNEAKRILGDDHQSM+RAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML
Sbjct: 1 MERRRTNVALAPASQQEVSISIPGGDAANSVQPLQN---------DKKQYSHKCVPLYKAA-------------------------LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 136
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A2H5Q8H2|A0A2H5Q8H2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_205570 PE=4 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 8.577e-64 Identity = 113/168 (67.26%), Postives = 118/168 (70.24%), Query Frame = 0 Query: 1 MERRRTNVAPASQQEVSISIPDGDAANSVQPLQNGLLEANIVHSTSSSSSIQTPDINSNSTQAPDSDTNQGGTSSQFNLPSLHLLQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
MERRRTNVAPASQQE+SISIP D ANSVQPLQN S P + L+GDCNEAKRILGDDHQSM+RAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLL+LQDENGNTAFCFAAAVGSVEIAQFML
Sbjct: 1 MERRRTNVAPASQQEISISIPGRDPANSVQPLQN---------DKKLYSHKCVPLYKAA-------------------------LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFML 134
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A067F1T1|A0A067F1T1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g007858mg PE=4 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.472e-62 Identity = 112/168 (66.67%), Postives = 117/168 (69.64%), Query Frame = 0 Query: 1 MERRRTNVAPASQQEVSISIPDGDAANSVQPLQNGLLEANIVHSTSSSSSIQTPDINSNSTQAPDSDTNQGGTSSQFNLPSLHLLQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
MERRRTNVAPASQQE+SISI D ANSVQPLQN S P + L+GDCNEAKRILGDDHQSM+RAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLL+LQDENGNTAFCFAAAVGSVEIAQFML
Sbjct: 1 MERRRTNVAPASQQEISISITGRDPANSVQPLQN---------DKKQYSHKCVPLYKAA-------------------------LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFML 134
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: V4T8M0|V4T8M0_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003268mg PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.697e-37 Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 0 Query: 85 LQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
L+GDC+EAKRILG DHQ M+RAA+TK QT+LHVATGAKQTNFVKQMV+L G D+LLTLQDE GNTAFCFAAAVGSVEIAQFML
Sbjct: 15 LKGDCSEAKRILGYDHQFMLRAAITKRCQTVLHVATGAKQTNFVKQMVKL-GQDDLLTLQDEKGNTAFCFAAAVGSVEIAQFML 97
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A2H5QEY3|A0A2H5QEY3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_223730 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.295e-36 Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = 0 Query: 85 LQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
L+GDC EAKRILG DHQ M+RAA+TK QT+LHVATGAK+TNFVKQMV+L G D+LLTLQDE GNTAFCFAAAVGSVEIAQFML
Sbjct: 15 LKGDCREAKRILGYDHQFMLRAAITKRCQTVLHVATGAKKTNFVKQMVDL-GQDDLLTLQDEKGNTAFCFAAAVGSVEIAQFML 97
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A5C7IRG6|A0A5C7IRG6_9ROSI (ANK_REP_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000489 PE=4 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.976e-25 Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 0 Query: 56 INSNSTQAPDSDTNQGGTSSQFNLPSLHLLQ---------GDCNEAKRILGD---DHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
I+++ TQAP + N Q NLP LL G+ EAK +LGD DH SM+R A+T+ +TILH++ GA+Q FV+++++L D+L LQD NGNTAFCFAAA GS+EI + ML
Sbjct: 33 IDAHPTQAPQNQQNHAPIY-QLNLPDRSLLSSQSKKAALAGNFKEAKSLLGDESNDHLSMLRIAITEMDETILHISNGARQVGFVEKIIKLMEPDDL-KLQDRNGNTAFCFAAAAGSIEIVKLML 155
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A067EPY5|A0A067EPY5_CITSI (ANK_REP_REGION domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g037194mg PE=4 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.656e-23 Identity = 47/84 (55.95%), Postives = 68/84 (80.95%), Query Frame = 0 Query: 85 LQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
L+G+ E + + D++S++ AA+T+G+QT+LHVATGAKQT+FV+Q++ ++L+ LQDENGNTAFCFAAAVG+V+IA ML
Sbjct: 65 LKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLM-LQDENGNTAFCFAAAVGAVDIANLML 147
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: V4T3D8|V4T3D8_CITCL (ANK_REP_REGION domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10003374mg PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.300e-20 Identity = 43/79 (54.43%), Postives = 63/79 (79.75%), Query Frame = 0 Query: 90 NEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
E + + D++S++ AA+T+G+QT+LHVATGAKQT+FV++++ ++L+ LQDENGNT FCFAAAVG+V+IA ML
Sbjct: 2 KEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQRLLNFMDPEDLM-LQDENGNTTFCFAAAVGAVDIANLML 79
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A5C7ISK1|A0A5C7ISK1_9ROSI (ANK_REP_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000383 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.339e-20 Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 0 Query: 5 RTNVAPASQQEVSISI---PDGDAANSVQPLQNGLLEANIVHSTSSSSSIQ--TPDINSNSTQAPDSDT--NQGGTSSQFNLPSLHL----LQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
RT++ P + + +S+ P D+ + V P ++ ++A+ HST+ S Q P NS PD + Q+ L + L L G+ EA +LGD + M+R A+T+ QT+LH+ATGAK+ FV+++V+L D+ L LQD GNTAFC AAAVGS+EIA+ ML
Sbjct: 63 RTSI-PRQKDTIVVSLAAGPQIDSDDLVLPAESSSIDAD--HSTTQSPQNQNHVPTYQLNS---PDRSLLPYESNNRDQYRLKCVPLQKAALTGNLLEAIPLLGDVPRWMLRTAITERDQTVLHLATGAKKVGFVEEIVKLMEPDD-LKLQDRKGNTAFCIAAAVGSLEIAKLML 230
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Match: A0A067D4A3|A0A067D4A3_CITSI (ANK_REP_REGION domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037056mg PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.045e-20 Identity = 43/79 (54.43%), Postives = 62/79 (78.48%), Query Frame = 0 Query: 90 NEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
E + + D++S + AA+T+G+QT+LHVATGAKQT+FV++++ ++L+ LQDENGNT FCFAAAVG+V+IA ML
Sbjct: 2 KEIEGLFEKDYRSTICAAITEGHQTVLHVATGAKQTSFVQRLLNFMDPEDLM-LQDENGNTTFCFAAAVGAVDIANLML 79
BLAST of CMJ_chr3_009580.1 vs. Araport11
Match: AT5G35830.1 (| Ankyrin repeat family protein | Chr5:14000313-14001416 REVERSE LENGTH=282 | 201606) HSP 1 Score: 57.7658 bits (138), Expect = 2.759e-10 Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 0 Query: 85 LQGDCNEAKRILGDDHQSMVRAAVTKGYQTILHVATGAKQTNFVKQMV-ELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFML 168
L+GD A I+ + + ++ +T +T+LH+A AK FV+ ++ L +D L L++ +GNTA CFAAA G VEIA+ ++
Sbjct: 96 LKGDWKAANGII-IEQKYIIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLESND--LALRNVDGNTALCFAAASGVVEIAKMLI 177 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_009580.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_009580.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_009580.1_cmj_v1 ID=CMJ_chr3_009580.1_cmj_v1; Name=CMJ_chr3_009580.1; organism=Citrus maxima; type=mRNA; length=507bpback to top protein sequence of CMJ_chr3_009580.1_cmj_v1 >CMJ_chr3_009580.1_cmj_v1 ID=CMJ_chr3_009580.1_cmj_v1; Name=CMJ_chr3_009580.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=169bpback to top mRNA from alignment at chr3:25666696..25667904+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1209bp; location=Sequence derived from: chr3:25666696..25667904+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:25666696..25667904+ >CMJ_chr3_009580.1_cmj_v1 ID=CMJ_chr3_009580.1_cmj_v1; Name=CMJ_chr3_009580.1; organism=Citrus maxima; type=CDS; length=507bp; location=Sequence derived from: chr3:25666696..25667904+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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