CMJ_chr3_009670.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: V4T8L6|V4T8L6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003287mg PE=4 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.515e-100 Identity = 178/275 (64.73%), Postives = 185/275 (67.27%), Query Frame = 0 Query: 103 MERRRTNVA--PASQQEVSISIPDGDAANSVQPLQNGLLEANIVHSTSSSSSIQTPDINSNSTQAPDSDTNQGGTSSQFNLPSLHL-LQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQS-LALQLLKKNKKLL--------------------------------AGATHAKYGAAMHMFARNPSAFTSSCPGWLK 341
MERRRTNVA PASQQEVSISIP GDAANSVQPLQN D Q S +P L+GDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA LFGQS +A L ++N+ L AGATHAKYG AMHM ARNPSAFTS+CPGWLK
Sbjct: 1 MERRRTNVALAPASQQEVSISIPGGDAANSVQPLQN--------------------------------DKKQ---YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLK 240
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: A0A2H5Q8H2|A0A2H5Q8H2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_205570 PE=4 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 2.204e-100 Identity = 172/274 (62.77%), Postives = 182/274 (66.42%), Query Frame = 0 Query: 103 MERRRTNVAPASQQEVSISIPDGDAANSVQPLQNG--LLEANIVHSTSSSSSIQTPDINSNSTQAPDSDTNQGGTSSQFNLPSLHLLQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQS-LALQLLKKNKKLL--------------------------------AGATHAKYGAAMHMFARNPSAFTSSCPGWLK 341
MERRRTNVAPASQQE+SISIP D ANSVQPLQN L V ++ L+GDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLL+LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA LFG+S +A L ++N+ L AGATHAKYG AMHM ARNPSAFTSSCPGWLK
Sbjct: 1 MERRRTNVAPASQQEISISIPGRDPANSVQPLQNDKKLYSHKCVPLYKAA------------------------------------LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGKSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSSCPGWLK 238
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: A0A067F1T1|A0A067F1T1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g007858mg PE=4 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 2.324e-98 Identity = 173/273 (63.37%), Postives = 182/273 (66.67%), Query Frame = 0 Query: 103 MERRRTNVAPASQQEVSISIPDGDAANSVQPLQNGLLEANIVHSTSSSSSIQTPDINSNSTQAPDSDTNQGGTSSQFNLPSLHL-LQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQS-LALQLLKKNKKLL--------------------------------AGATHAKYGAAMHMFARNPSAFTSSCPGWLK 341
MERRRTNVAPASQQE+SISI D ANSVQPLQN D Q S +P L+GDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLL+LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA LFGQS +A L ++N+ L AGATHAKYG AMHM ARNPSAFTS+CPGWLK
Sbjct: 1 MERRRTNVAPASQQEISISITGRDPANSVQPLQN--------------------------------DKKQ---YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLK 238
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: V4T8M0|V4T8M0_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003268mg PE=4 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.864e-65 Identity = 122/188 (64.89%), Postives = 133/188 (70.74%), Query Frame = 0 Query: 187 LQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQSLALQLLKKNKK---------------------------------LLAGATHAKYGAAMHMFARNPSAFTSSCPGWLK 341
L+GDC+EAKRILG DHQ MLRAA+TK QT+LHVATGAKQTNFVKQMV+L G D+LLTLQDE GNTAFCFAAAVGSVEIAQFML+RNP+LLTIRGG QMTPLYIA LFGQS L + ++ LLA ATH KYG AMHM ARNPSAFTSS PG LK
Sbjct: 15 LKGDCSEAKRILGYDHQFMLRAAITKRCQTVLHVATGAKQTNFVKQMVKL-GQDDLLTLQDEKGNTAFCFAAAVGSVEIAQFMLKRNPDLLTIRGGAQMTPLYIAALFGQSKMASFLYRQEEDNLTPDDLENIFFVAIESGLYDLALKLLKKNKKLLAVATHVKYGTAMHMLARNPSAFTSSGPGRLK 201
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: A0A2H5QEY3|A0A2H5QEY3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_223730 PE=4 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 4.682e-65 Identity = 122/188 (64.89%), Postives = 132/188 (70.21%), Query Frame = 0 Query: 187 LQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQSLALQLLKKNKK---------------------------------LLAGATHAKYGAAMHMFARNPSAFTSSCPGWLK 341
L+GDC EAKRILG DHQ MLRAA+TK QT+LHVATGAK+TNFVKQMV+L G D+LLTLQDE GNTAFCFAAAVGSVEIAQFML+RNP+LLTIRGG QMTPLYIA LFGQS L + K+ LLA ATH KYG AMHM ARNPSAFTSS PG LK
Sbjct: 15 LKGDCREAKRILGYDHQFMLRAAITKRCQTVLHVATGAKKTNFVKQMVDL-GQDDLLTLQDEKGNTAFCFAAAVGSVEIAQFMLKRNPDLLTIRGGAQMTPLYIAALFGQSKMASFLYRQKEDNLTPDDLENIFFVSIESGLYDLALKLLKKNKKLLAVATHVKYGTAMHMLARNPSAFTSSGPGPLK 201
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: V4SYL3|V4SYL3_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000862mg PE=4 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.463e-37 Identity = 82/182 (45.05%), Postives = 112/182 (61.54%), Query Frame = 0 Query: 193 EAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQS---------------------------------LALQLLKKNKKLLAGATHAKYGAAMHMFARNPSAFTSSCPGWLK 341
E + + D++S++ AA+T+G+QT+LHVATGAKQT+FV+Q++ ++L+ LQDENGNTAFCFAAAVG+V+IA ML++NP+LL IRG M PLY A LFGQ+ LAL+LLK +++ LA H K+G A+HM ARNP F G +K
Sbjct: 3 EIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLM-LQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYDLALKLLKNDRQ-LALTHHVKHGTALHMLARNPFPFAGRVLGIMK 182
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: A0A067EPY5|A0A067EPY5_CITSI (ANK_REP_REGION domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g037194mg PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.059e-34 Identity = 63/111 (56.76%), Postives = 88/111 (79.28%), Query Frame = 0 Query: 187 LQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQS 297
L+G+ E + + D++S++ AA+T+G+QT+LHVATGAKQT+FV+Q++ ++L+ LQDENGNTAFCFAAAVG+V+IA ML++NP+LL IRG M PLY A LFGQ+
Sbjct: 65 LKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLM-LQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQT 174
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: A0A5C7IRG6|A0A5C7IRG6_9ROSI (ANK_REP_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000489 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.326e-32 Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 158 INSNSTQAPDSDTNQGGTSSQFNLPSLHLLQ---------GDCNEAKRILGD---DHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQS 297
I+++ TQAP + N Q NLP LL G+ EAK +LGD DH SMLR A+T+ +TILH++ GA+Q FV+++++L D+L LQD NGNTAFCFAAA GS+EI + ML +N +LLT+RG LY+A LFG +
Sbjct: 33 IDAHPTQAPQNQQNHAPIY-QLNLPDRSLLSSQSKKAALAGNFKEAKSLLGDESNDHLSMLRIAITEMDETILHISNGARQVGFVEKIIKLMEPDDL-KLQDRNGNTAFCFAAAAGSIEIVKLMLDKNLDLLTLRGVDNKVSLYMAALFGDT 182
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: A0A2H5P9S1|A0A2H5P9S1_CITUN (ANK_REP_REGION domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_116680 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.337e-31 Identity = 96/247 (38.87%), Postives = 132/247 (53.44%), Query Frame = 0 Query: 139 LEANIVHSTS-----SSSSIQTPDINS-NSTQA----PDSDTNQGGTSSQFNLPSLHLLQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQ-----------------------------------SLALQLLKKNKKLLAGATHAKYGAAMHMFARNPSAFTSSCPGWL 340
+EA+ V+STS S +I T S NSTQ+ +D G ++ PSLHLL A + +D +S+L A + KGY+T+LH+A GA+QT FV+++++L ++L TLQD NGNTAFCFA A GS+ IA+ ML++N LLT+RGG MTPLY+A + Q LAL+LL+ + LA A Y A+H+ AR PSAF S G L
Sbjct: 1 MEASDVYSTSGSQIHSDYTIGTAKTESDNSTQSFQIRESNDIENGYNPTRPKWPSLHLLSKHL--ATQNGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMEPEDL-TLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKENLTPEDQNALFFTCISTDLHDLALKLLEDHSG-LAVARDGNYETALHVLARKPSAFASRNQGLL 243
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Match: V4U7I7|V4U7I7_CITCL (ANK_REP_REGION domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018102mg PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.337e-31 Identity = 96/247 (38.87%), Postives = 132/247 (53.44%), Query Frame = 0 Query: 139 LEANIVHSTS-----SSSSIQTPDINS-NSTQA----PDSDTNQGGTSSQFNLPSLHLLQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQ-----------------------------------SLALQLLKKNKKLLAGATHAKYGAAMHMFARNPSAFTSSCPGWL 340
+EA+ V+STS S +I T S NSTQ+ +D G ++ PSLHLL A + +D +S+L A + KGY+T+LH+A GA+QT FV+++++L ++L TLQD NGNTAFCFA A GS+ IA+ ML++N LLT+RGG MTPLY+A + Q LAL+LL+ + LA A Y A+H+ AR PSAF S G L
Sbjct: 1 MEASDVYSTSGSQIHSDYTIGTAKTESDNSTQSFQIRESNDIENGYNPTRPKWPSLHLLSKHL--ATQNGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMEPEDL-TLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKENLTPEDQNALFFTCISTDLHDLALKLLEDHSG-LAVARDGNYETALHVLARKPSAFASRNQGLL 243
BLAST of CMJ_chr3_009670.1 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06690 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.181e-24 Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 Query: 37 AEKRLRNAYEKLKKTGIPLASNQVNYSLIYRKPEENGVKTACDELGITLIAYCPIAQ 93
+EKRLR+AYE+LKK GIPLASNQVNYSLIYR PE+ GVK ACDELG+TLIAY PIAQ
Sbjct: 211 SEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQ 267
BLAST of CMJ_chr3_009670.1 vs. Araport11
Match: AT1G06690.1 (| NAD(P)-linked oxidoreductase superfamily protein | Chr1:2049742-2052039 REVERSE LENGTH=377 | 201606) HSP 1 Score: 106.301 bits (264), Expect = 2.232e-25 Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 Query: 37 AEKRLRNAYEKLKKTGIPLASNQVNYSLIYRKPEENGVKTACDELGITLIAYCPIAQ 93
+EKRLR+AYE+LKK GIPLASNQVNYSLIYR PE+ GVK ACDELG+TLIAY PIAQ
Sbjct: 211 SEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQ 267
BLAST of CMJ_chr3_009670.1 vs. Araport11
Match: AT5G35830.1 (| Ankyrin repeat family protein | Chr5:14000313-14001416 REVERSE LENGTH=282 | 201606) HSP 1 Score: 93.2041 bits (230), Expect = 2.279e-21 Identity = 47/123 (38.21%), Postives = 77/123 (62.60%), Query Frame = 0 Query: 187 LQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQSLALQLLKKNKKL 309
L+GD A I+ + + ++ +T +T+LH+A AK FV+ ++ + N L L++ +GNTA CFAAA G VEIA+ ++++N +L IRGGG+ TP+++A LFG ++ L KN +
Sbjct: 96 LKGDWKAANGII-IEQKYIIYQKITSKSETVLHIAVAAKHEGFVRNLLG-SLESNDLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEMVKYLYKNTRF 216
BLAST of CMJ_chr3_009670.1 vs. Araport11
Match: AT3G54070.1 (| LOW protein: ankyrin repeat protein | Chr3:20022642-20023603 REVERSE LENGTH=256 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 4.431e-12 Identity = 44/160 (27.50%), Postives = 81/160 (50.62%), Query Frame = 0 Query: 186 LLQGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMV-ELTGHDNLLTLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAVLFGQSLALQLLKKNKKLLAGATHAKYGAAMH-MFARNPSAFTSSCPGWLKEK 343
+L GD A ++ +++ +T + LH+A AK +FV+ ++ E+ D L+L++++GNT FAAA+G +E A+ ++ +L I MTP++IA L+G +Q L +K + +Y H M + + + P W+ E+
Sbjct: 58 VLTGDWKTASTLISRKECNVVEQ-ITGNSEIALHIAVAAKHKDFVRNLLREMDPPD--LSLKNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMVQYL-FSKTSIKDLNDQQYLNLFHTMISADIYGVFADVPLWMLER 213 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_009670.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_009670.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_009670.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_009670.1_cmj_v1 ID=CMJ_chr3_009670.1_cmj_v1; Name=CMJ_chr3_009670.1; organism=Citrus maxima; type=mRNA; length=1131bpback to top protein sequence of CMJ_chr3_009670.1_cmj_v1 >CMJ_chr3_009670.1_cmj_v1 ID=CMJ_chr3_009670.1_cmj_v1; Name=CMJ_chr3_009670.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=377bpback to top mRNA from alignment at chr3:25963287..25969092+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=5806bp; location=Sequence derived from: chr3:25963287..25969092+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:25963287..25969092+ >CMJ_chr3_009670.1_cmj_v1 ID=CMJ_chr3_009670.1_cmj_v1; Name=CMJ_chr3_009670.1; organism=Citrus maxima; type=CDS; length=1131bp; location=Sequence derived from: chr3:25963287..25969092+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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